Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:50:28 (7993): wrapper (7.7.26015): starting
07:50:28 (7993): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 07:50:28] Arguments: --nthreads 8
[2026-01-11 07:50:28] Threads: 8
[2026-01-11 07:50:28] Checking for CVMFS
[2026-01-11 07:50:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 07:50:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 07:50:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 07:50:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 07:50:31] 2.11.2.0 22677 37956 101224 155007 0 85 22470919 25165825 899 130560 0 7858696 99.732 8937173 2503 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-11 07:50:31] CVMFS is ok
[2026-01-11 07:50:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:50:32] Checking for apptainer binary...
[2026-01-11 07:50:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 07:50:32] Running /usr/bin/apptainer --version
[2026-01-11 07:50:32] apptainer version 1.3.2-1.el7
[2026-01-11 07:50:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:51:01] cg-vwn370.simple-grid.lan
[2026-01-11 07:51:01] apptainer works
[2026-01-11 07:51:01] Set ATHENA_PROC_NUMBER=8
[2026-01-11 07:51:01] Set ATHENA_CORE_NUMBER=8
[2026-01-11 07:51:02] Starting ATLAS job with PandaID=6963541834
[2026-01-11 07:51:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 13:18:14]  *** The last 200 lines of the pilot log: ***
[2026-01-11 13:18:14] 2026-01-11 12:17:26,121 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 13:18:14] 2026-01-11 12:17:26,123 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963541834/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,124 | INFO     | extracted standard info from prmon json
[2026-01-11 13:18:14] 2026-01-11 12:17:26,124 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 13:18:14] 2026-01-11 12:17:26,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 13:18:14] 2026-01-11 12:17:26,124 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 13:18:14] 2026-01-11 12:17:26,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 13:18:14] 2026-01-11 12:17:26,131 | INFO     | fitting pss+swap vs Time
[2026-01-11 13:18:14] 2026-01-11 12:17:26,132 | INFO     | sum of square deviations: 8971993338.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,146 | INFO     | sum of deviations: 148995664741.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,147 | INFO     | mean x: 1768124379.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,147 | INFO     | mean y: 2431805.042345277
[2026-01-11 13:18:14] 2026-01-11 12:17:26,147 | INFO     | intersect: -29360370558.852234
[2026-01-11 13:18:14] 2026-01-11 12:17:26,148 | INFO     | chi2: 9.05124380221557
[2026-01-11 13:18:14] 2026-01-11 12:17:26,148 | INFO     | sum of square deviations: 8540720135.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,151 | INFO     | sum of deviations: 187724391958.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,152 | INFO     | mean x: 1768124226.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,152 | INFO     | mean y: 2445355.917218543
[2026-01-11 13:18:14] 2026-01-11 12:17:26,152 | INFO     | intersect: -38860793347.70927
[2026-01-11 13:18:14] 2026-01-11 12:17:26,152 | INFO     | chi2: 7.544154009784385
[2026-01-11 13:18:14] 2026-01-11 12:17:26,153 | INFO     | current chi2=7.544154009784385 (change=16.650637474401904 %)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,153 | INFO     | right removable region: 301
[2026-01-11 13:18:14] 2026-01-11 12:17:26,153 | INFO     | sum of square deviations: 8540720135.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,167 | INFO     | sum of deviations: 42220763778.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,167 | INFO     | mean x: 1768124531.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,167 | INFO     | mean y: 2469545.8841059604
[2026-01-11 13:18:14] 2026-01-11 12:17:26,167 | INFO     | intersect: -8738194823.287634
[2026-01-11 13:18:14] 2026-01-11 12:17:26,168 | INFO     | chi2: 4.21220376726287
[2026-01-11 13:18:14] 2026-01-11 12:17:26,168 | INFO     | current chi2=4.21220376726287 (change=53.46270789621418 %)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,168 | INFO     | sum of square deviations: 8123493708.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,172 | INFO     | sum of deviations: -34984075412.99999
[2026-01-11 13:18:14] 2026-01-11 12:17:26,172 | INFO     | mean x: 1768124684.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,172 | INFO     | mean y: 2497722.9966329965
[2026-01-11 13:18:14] 2026-01-11 12:17:26,172 | INFO     | intersect: 7616981036.220218
[2026-01-11 13:18:14] 2026-01-11 12:17:26,173 | INFO     | chi2: 1.7904526088905026
[2026-01-11 13:18:14] 2026-01-11 12:17:26,173 | INFO     | current chi2=1.7904526088905026 (change=57.49368483059033 %)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,173 | INFO     | sum of square deviations: 7720081493.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,176 | INFO     | sum of deviations: -50970426665.00001
[2026-01-11 13:18:14] 2026-01-11 12:17:26,177 | INFO     | mean x: 1768124836.5
[2026-01-11 13:18:14] 2026-01-11 12:17:26,177 | INFO     | mean y: 2503737.7808219176
[2026-01-11 13:18:14] 2026-01-11 12:17:26,177 | INFO     | intersect: 11676224720.532679
[2026-01-11 13:18:14] 2026-01-11 12:17:26,177 | INFO     | chi2: 1.651899337398905
[2026-01-11 13:18:14] 2026-01-11 12:17:26,178 | INFO     | current chi2=1.651899337398905 (change=7.738449529666997 %)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,178 | INFO     | left removable region: 30
[2026-01-11 13:18:14] 2026-01-11 12:17:26,188 | INFO     | sum of square deviations: 6171352920.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,191 | INFO     | sum of deviations: -10397127676.000002
[2026-01-11 13:18:14] 2026-01-11 12:17:26,191 | INFO     | mean x: 1768125111.0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,192 | INFO     | mean y: 2519035.963099631
[2026-01-11 13:18:14] 2026-01-11 12:17:26,192 | INFO     | intersect: 2981350868.2234197
[2026-01-11 13:18:14] 2026-01-11 12:17:26,192 | INFO     | chi2: 0.011701882205045705
[2026-01-11 13:18:14] 2026-01-11 12:17:26,192 | INFO     | current memory leak: -1.68 B/s (using 271 data points, chi2=0.01)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,193 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,193 | INFO     | ..............................
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . Timing measurements:
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . get job = 0 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . initial setup = 12 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . payload setup = 139 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . stage-in = 0 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . payload execution = 18838 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . stage-out = 4 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | . log creation = 1 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,194 | INFO     | ..............................
[2026-01-11 13:18:14] 2026-01-11 12:17:26,343 | INFO     | 
[2026-01-11 13:18:14] 2026-01-11 12:17:26,343 | INFO     | job summary report
[2026-01-11 13:18:14] 2026-01-11 12:17:26,343 | INFO     | --------------------------------------------------
[2026-01-11 13:18:14] 2026-01-11 12:17:26,343 | INFO     | PanDA job id: 6963541834
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | task id: 47898826
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | errors: (none)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | pilot state: finished 
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | transexitcode: 0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | exeerrorcode: 0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | exeerrordiag: 
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | exitcode: 0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,344 | INFO     | exitmsg: OK
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | cpuconsumptiontime: 77432 s
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | nevents: 400
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | neventsw: 0
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | pid: 18213
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | pgrp: 18213
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | corecount: 8
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | event service: False
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | sizes: {0: 2283692, 1: 2283947, 2: 2283975, 12: 2283975, 23: 2284003, 34: 2284031, 45: 2284187, 55: 2284215, 66: 2284243, 77: 2284271, 87: 2284327, 98: 2284635, 10
[2026-01-11 13:18:14] 2026-01-11 12:17:26,345 | INFO     | --------------------------------------------------
[2026-01-11 13:18:14] 2026-01-11 12:17:26,346 | INFO     | 
[2026-01-11 13:18:14] 2026-01-11 12:17:26,346 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-11 13:18:14] 2026-01-11 12:17:26,943 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 13:18:14] 2026-01-11 12:17:26,946 | INFO     | job 6963541834 has completed (purged errors)
[2026-01-11 13:18:14] 2026-01-11 12:17:26,946 | INFO     | overall cleanup function is called
[2026-01-11 13:18:14] 2026-01-11 12:17:27,955 | INFO     | --- collectZombieJob: --- 10, [18213]
[2026-01-11 13:18:14] 2026-01-11 12:17:27,956 | INFO     | zombie collector waiting for pid 18213
[2026-01-11 13:18:14] 2026-01-11 12:17:27,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 13:18:14] 2026-01-11 12:17:27,956 | INFO     | collected zombie processes
[2026-01-11 13:18:14] 2026-01-11 12:17:27,956 | INFO     | will attempt to kill all subprocesses of pid=18213
[2026-01-11 13:18:14] 2026-01-11 12:17:28,037 | INFO     | process IDs to be killed: [18213] (in reverse order)
[2026-01-11 13:18:14] 2026-01-11 12:17:28,997 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 13:18:14] 2026-01-11 12:17:28,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 13:18:14] 2026-01-11 12:17:28,999 | INFO     | did not find any defunct processes belonging to 18213
[2026-01-11 13:18:14] 2026-01-11 12:17:29,001 | INFO     | did not find any defunct processes belonging to 18213
[2026-01-11 13:18:14] 2026-01-11 12:17:29,001 | INFO     | ready for new job
[2026-01-11 13:18:14] 2026-01-11 12:17:29,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 13:18:14] 2026-01-11 12:17:29,004 | INFO     | ***************************************
[2026-01-11 13:18:14] 2026-01-11 12:17:29,004 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 13:18:14] 2026-01-11 12:17:29,004 | INFO     | ***************************************
[2026-01-11 13:18:14] 2026-01-11 12:17:29,004 | INFO     | 
[2026-01-11 13:18:14] 2026-01-11 12:17:29,005 | INFO     | pilot is running in a VM
[2026-01-11 13:18:14] 2026-01-11 12:17:29,005 | INFO     | architecture information:
[2026-01-11 13:18:14] 2026-01-11 12:17:29,024 | INFO     | executing command: cat /etc/os-release
[2026-01-11 13:18:14] 2026-01-11 12:17:29,231 | INFO     | cat /etc/os-release:
[2026-01-11 13:18:14] NAME="CentOS Linux"
[2026-01-11 13:18:14] VERSION="7 (Core)"
[2026-01-11 13:18:14] ID="centos"
[2026-01-11 13:18:14] ID_LIKE="rhel fedora"
[2026-01-11 13:18:14] VERSION_ID="7"
[2026-01-11 13:18:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 13:18:14] ANSI_COLOR="0;31"
[2026-01-11 13:18:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 13:18:14] HOME_URL="https://www.centos.org/"
[2026-01-11 13:18:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 13:18:14] 
[2026-01-11 13:18:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 13:18:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 13:18:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 13:18:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 13:18:14] 
[2026-01-11 13:18:14] 2026-01-11 12:17:29,231 | INFO     | ***************************************
[2026-01-11 13:18:14] 2026-01-11 12:17:29,734 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-11 13:18:14] 2026-01-11 12:17:30,035 | INFO     | sufficient remaining disk space (497556652032 B)
[2026-01-11 13:18:14] 2026-01-11 12:17:30,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 13:18:14] 2026-01-11 12:17:30,036 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 13:18:14] 2026-01-11 12:17:30,036 | INFO     | update_server=False
[2026-01-11 13:18:14] 2026-01-11 12:17:30,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 13:18:14] 2026-01-11 12:17:30,172 | INFO     | all data control threads have been joined
[2026-01-11 13:18:14] 2026-01-11 12:17:30,342 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 13:18:14] 2026-01-11 12:17:30,343 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 13:18:14] 2026-01-11 12:17:30,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:18:14] 2026-01-11 12:17:30,343 | INFO     | will abort loop
[2026-01-11 13:18:14] 2026-01-11 12:17:30,563 | INFO     | all payload control threads have been joined
[2026-01-11 13:18:14] 2026-01-11 12:17:31,042 | INFO     | [job] retrieve thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,112 | INFO     | all job control threads have been joined
[2026-01-11 13:18:14] 2026-01-11 12:17:31,178 | INFO     | [data] control thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,349 | INFO     | [job] job monitor thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 13:18:14] 2026-01-11 12:17:31,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:18:14] 2026-01-11 12:17:31,540 | INFO     | [payload] failed_post thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,569 | INFO     | [payload] control thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,578 | INFO     | [payload] validate_post thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,665 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:31,870 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:32,033 | INFO     | [job] validate thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:32,086 | INFO     | [data] copytool_in thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:32,118 | INFO     | [job] control thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:32,238 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:32,372 | INFO     | [job] queue monitor thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:32,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 13:18:14] 2026-01-11 12:17:32,530 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:33,358 | INFO     | [data] copytool_out thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:36,453 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 13:18:14] 2026-01-11 12:17:58,307 | INFO     | PID=11722 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 13:18:14] 2026-01-11 12:17:58,307 | INFO     | .. there are 2 such processes running
[2026-01-11 13:18:14] 2026-01-11 12:17:58,308 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 13:18:14] 2026-01-11 12:17:58,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 13:18:14] 2026-01-11 12:17:58,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 13:18:14] 2026-01-11 12:18:03,749 | INFO     | [monitor] cgroup control has ended
[2026-01-11 13:18:14] 2026-01-11 12:18:04,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498010031936)>', '<ExcThread(monitor, started 140497414768384)>']
[2026-01-11 13:18:14] 2026-01-11 12:18:04,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 13:18:14] 2026-01-11 12:18:04,344 | INFO     | [monitor] control thread has ended
[2026-01-11 13:18:14] 2026-01-11 12:18:09,233 | INFO     | all workflow threads have been joined
[2026-01-11 13:18:14] 2026-01-11 12:18:09,234 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 13:18:14] 2026-01-11 12:18:09,234 | INFO     | traces error code: 0
[2026-01-11 13:18:14] 2026-01-11 12:18:09,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 13:18:14] 2026-01-11 12:18:09,568 [wrapper] ==== pilot stdout END ====
[2026-01-11 13:18:14] 2026-01-11 12:18:09,612 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 13:18:14] 2026-01-11 12:18:09,699 [wrapper] pilotpid: 11722
[2026-01-11 13:18:14] 2026-01-11 12:18:09,793 [wrapper] Pilot exit status: 0
[2026-01-11 13:18:14] 2026-01-11 12:18:10,163 [wrapper] pandaids: 6963541834
[2026-01-11 13:18:14] 2026-01-11 12:18:11,450 [wrapper] cleanup supervisor_pilot 29834 11723
[2026-01-11 13:18:14] 2026-01-11 12:18:11,554 [wrapper] Test setup, not cleaning
[2026-01-11 13:18:14] 2026-01-11 12:18:11,641 [wrapper] apfmon messages muted
[2026-01-11 13:18:14] 2026-01-11 12:18:11,735 [wrapper] ==== wrapper stdout END ====
[2026-01-11 13:18:14] 2026-01-11 12:18:11,828 [wrapper] ==== wrapper stderr END ====
[2026-01-11 13:18:14]  *** Error codes and diagnostics ***
[2026-01-11 13:18:14]     "exeErrorCode": 0,
[2026-01-11 13:18:14]     "exeErrorDiag": "",
[2026-01-11 13:18:14]     "pilotErrorCode": 0,
[2026-01-11 13:18:14]     "pilotErrorDiag": "",
[2026-01-11 13:18:14]  *** Listing of results directory ***
[2026-01-11 13:18:14] total 445148
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-11 13:18:14] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc       100 Jan 11 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 13:18:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 07:50 run_atlas
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc       105 Jan 11 07:50 job.xml
[2026-01-11 13:18:14] -rw-r--r--. 2 boinc boinc 226416265 Jan 11 07:50 EVNT.47898824._000767.pool.root.1
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc      6390 Jan 11 07:50 init_data.xml
[2026-01-11 13:18:14] -rw-r--r--. 2 boinc boinc     15847 Jan 11 07:50 start_atlas.sh
[2026-01-11 13:18:14] drwxrwx--x. 2 boinc boinc        68 Jan 11 07:50 shared
[2026-01-11 13:18:14] -rw-r--r--. 2 boinc boinc    592403 Jan 11 07:50 input.tar.gz
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc         0 Jan 11 07:50 boinc_lockfile
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc      2519 Jan 11 07:51 pandaJob.out
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc    989548 Jan 11 07:55 agis_schedconf.cvmfs.json
[2026-01-11 13:18:14] drwx------. 5 boinc boinc      4096 Jan 11 07:55 pilot3
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc 219307358 Jan 11 13:13 HITS.47898826._039627.pool.root.1
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc       530 Jan 11 13:14 boinc_task_state.xml
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc      1020 Jan 11 13:15 memory_monitor_summary.json
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc   1516240 Jan 11 13:15 agis_ddmendpoints.agis.ALL.json
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc    528997 Jan 11 13:15 log.47898826._039627.job.log.tgz.1
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc      7791 Jan 11 13:17 heartbeat.json
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc        95 Jan 11 13:17 pilot_heartbeat.json
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc      8192 Jan 11 13:18 boinc_mmap_file
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc        28 Jan 11 13:18 wrapper_checkpoint.txt
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc      5070 Jan 11 13:18 pilotlog.txt
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc   2573947 Jan 11 13:18 log.47898826._039627.job.log.1
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc       357 Jan 11 13:18 output.list
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc       620 Jan 11 13:18 runtime_log
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc   3123200 Jan 11 13:18 result.tar.gz
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc      8817 Jan 11 13:18 runtime_log.err
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc       657 Jan 11 13:18 NCpLDmHDJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzFmKDmXkmKFm.diag
[2026-01-11 13:18:14] -rw-r--r--. 1 boinc boinc     20777 Jan 11 13:18 stderr.txt
[2026-01-11 13:18:14] HITS file was successfully produced:
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc 219307358 Jan 11 13:13 shared/HITS.pool.root.1
[2026-01-11 13:18:14]  *** Contents of shared directory: ***
[2026-01-11 13:18:14] total 438928
[2026-01-11 13:18:14] -rw-r--r--. 2 boinc boinc 226416265 Jan 11 07:50 ATLAS.root_0
[2026-01-11 13:18:14] -rw-r--r--. 2 boinc boinc     15847 Jan 11 07:50 start_atlas.sh
[2026-01-11 13:18:14] -rw-r--r--. 2 boinc boinc    592403 Jan 11 07:50 input.tar.gz
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc 219307358 Jan 11 13:13 HITS.pool.root.1
[2026-01-11 13:18:14] -rw-------. 1 boinc boinc   3123200 Jan 11 13:18 result.tar.gz
13:18:15 (7993): run_atlas exited; CPU time 77616.589424
13:18:15 (7993): called boinc_finish(0)

</stderr_txt>
]]>

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