Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:47:44 (17848): wrapper (7.7.26015): starting
07:47:44 (17848): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 07:47:44] Arguments: --nthreads 8
[2026-01-10 07:47:44] Threads: 8
[2026-01-10 07:47:44] Checking for CVMFS
[2026-01-10 07:47:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:47:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:47:47] 2.11.2.0 15174 36497 103020 154970 0 62 14322644 25165824 899 130560 0 16844117 99.880 7881341 3726 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 07:47:47] CVMFS is ok
[2026-01-10 07:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:47:47] Checking for apptainer binary...
[2026-01-10 07:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:47:47] Running /usr/bin/apptainer --version
[2026-01-10 07:47:47] apptainer version 1.3.2-1.el7
[2026-01-10 07:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:47:59] cg-vwn376.simple-grid.lan
[2026-01-10 07:47:59] apptainer works
[2026-01-10 07:47:59] Set ATHENA_PROC_NUMBER=8
[2026-01-10 07:47:59] Set ATHENA_CORE_NUMBER=8
[2026-01-10 07:47:59] Starting ATLAS job with PandaID=6963144314
[2026-01-10 07:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:49:30]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:49:30] 2026-01-10 12:48:25,881 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 13:49:30] 2026-01-10 12:48:25,883 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6963144314/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,884 | INFO     | extracted standard info from prmon json
[2026-01-10 13:49:30] 2026-01-10 12:48:25,884 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:49:30] 2026-01-10 12:48:25,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:49:30] 2026-01-10 12:48:25,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:49:30] 2026-01-10 12:48:25,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:49:30] 2026-01-10 12:48:25,892 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:49:30] 2026-01-10 12:48:25,893 | INFO     | sum of square deviations: 12187409905.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,897 | INFO     | sum of deviations: 186211607178.00003
[2026-01-10 13:49:30] 2026-01-10 12:48:25,897 | INFO     | mean x: 1768038837.5
[2026-01-10 13:49:30] 2026-01-10 12:48:25,897 | INFO     | mean y: 2431873.211764706
[2026-01-10 13:49:30] 2026-01-10 12:48:25,897 | INFO     | intersect: -27011458366.824257
[2026-01-10 13:49:30] 2026-01-10 12:48:25,898 | INFO     | chi2: 9.116549436544476
[2026-01-10 13:49:30] 2026-01-10 12:48:25,899 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,909 | INFO     | sum of deviations: 229012744995.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,909 | INFO     | mean x: 1768038685.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,909 | INFO     | mean y: 2444075.585074627
[2026-01-10 13:49:30] 2026-01-10 12:48:25,909 | INFO     | intersect: -34730567441.339
[2026-01-10 13:49:30] 2026-01-10 12:48:25,910 | INFO     | chi2: 7.597673461894378
[2026-01-10 13:49:30] 2026-01-10 12:48:25,910 | INFO     | current chi2=7.597673461894378 (change=16.660645403419327 %)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,910 | INFO     | right removable region: 334
[2026-01-10 13:49:30] 2026-01-10 12:48:25,911 | INFO     | sum of square deviations: 11657595320.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,914 | INFO     | sum of deviations: 68236599580.00001
[2026-01-10 13:49:30] 2026-01-10 12:48:25,915 | INFO     | mean x: 1768038990.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,915 | INFO     | mean y: 2465818.623880597
[2026-01-10 13:49:30] 2026-01-10 12:48:25,915 | INFO     | intersect: -10346578327.339632
[2026-01-10 13:49:30] 2026-01-10 12:48:25,915 | INFO     | chi2: 4.338643966944051
[2026-01-10 13:49:30] 2026-01-10 12:48:25,916 | INFO     | current chi2=4.338643966944051 (change=52.4091434248991 %)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,916 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 13:49:30] 2026-01-10 12:48:25,920 | INFO     | sum of deviations: -21101983912.500004
[2026-01-10 13:49:30] 2026-01-10 12:48:25,920 | INFO     | mean x: 1768039142.5
[2026-01-10 13:49:30] 2026-01-10 12:48:25,920 | INFO     | mean y: 2492285.3666666667
[2026-01-10 13:49:30] 2026-01-10 12:48:25,921 | INFO     | intersect: 3350596037.8187065
[2026-01-10 13:49:30] 2026-01-10 12:48:25,921 | INFO     | chi2: 1.742839816259666
[2026-01-10 13:49:30] 2026-01-10 12:48:25,921 | INFO     | current chi2=1.742839816259666 (change=59.82984938293415 %)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,922 | INFO     | sum of square deviations: 10644478650.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,925 | INFO     | sum of deviations: -33961990828.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,926 | INFO     | mean x: 1768039295.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,926 | INFO     | mean y: 2496194.636923077
[2026-01-10 13:49:30] 2026-01-10 12:48:25,926 | INFO     | intersect: 5643555404.270791
[2026-01-10 13:49:30] 2026-01-10 12:48:25,926 | INFO     | chi2: 1.667037042079645
[2026-01-10 13:49:30] 2026-01-10 12:48:25,927 | INFO     | current chi2=1.667037042079645 (change=4.349382741478937 %)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,927 | INFO     | left removable region: 30
[2026-01-10 13:49:30] 2026-01-10 12:48:25,927 | INFO     | sum of square deviations: 8711530780.0
[2026-01-10 13:49:30] 2026-01-10 12:48:25,936 | INFO     | sum of deviations: 2675966147.4999995
[2026-01-10 13:49:30] 2026-01-10 12:48:25,943 | INFO     | mean x: 1768039569.5
[2026-01-10 13:49:30] 2026-01-10 12:48:25,943 | INFO     | mean y: 2512388.1414473685
[2026-01-10 13:49:30] 2026-01-10 12:48:25,943 | INFO     | intersect: -540585507.613502
[2026-01-10 13:49:30] 2026-01-10 12:48:25,944 | INFO     | chi2: 0.005395238393193046
[2026-01-10 13:49:30] 2026-01-10 12:48:25,944 | INFO     | current memory leak: 0.31 B/s (using 304 data points, chi2=0.01)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,945 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 13:49:30] 2026-01-10 12:48:25,945 | INFO     | ..............................
[2026-01-10 13:49:30] 2026-01-10 12:48:25,945 | INFO     | . Timing measurements:
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . get job = 0 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . initial setup = 11 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . payload setup = 161 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . stage-in = 0 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . payload execution = 20851 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . stage-out = 4 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | . log creation = 1 s
[2026-01-10 13:49:30] 2026-01-10 12:48:25,946 | INFO     | ..............................
[2026-01-10 13:49:30] 2026-01-10 12:48:26,069 | INFO     | 
[2026-01-10 13:49:30] 2026-01-10 12:48:26,069 | INFO     | job summary report
[2026-01-10 13:49:30] 2026-01-10 12:48:26,069 | INFO     | --------------------------------------------------
[2026-01-10 13:49:30] 2026-01-10 12:48:26,069 | INFO     | PanDA job id: 6963144314
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | task id: 47898826
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | errors: (none)
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | pilot state: finished 
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | transexitcode: 0
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | exeerrorcode: 0
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | exeerrordiag: 
[2026-01-10 13:49:30] 2026-01-10 12:48:26,070 | INFO     | exitcode: 0
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | exitmsg: OK
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | cpuconsumptiontime: 78407 s
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | nevents: 400
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | neventsw: 0
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | pid: 28054
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | pgrp: 28054
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | corecount: 8
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | event service: False
[2026-01-10 13:49:30] 2026-01-10 12:48:26,071 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 44: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 10
[2026-01-10 13:49:30] 2026-01-10 12:48:26,072 | INFO     | --------------------------------------------------
[2026-01-10 13:49:30] 2026-01-10 12:48:26,072 | INFO     | 
[2026-01-10 13:49:30] 2026-01-10 12:48:26,072 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-10 13:49:30] 2026-01-10 12:48:26,576 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,579 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:49:30] 2026-01-10 12:48:26,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,579 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:49:30] 2026-01-10 12:48:26,579 | INFO     | job 6963144314 has completed (purged errors)
[2026-01-10 13:49:30] 2026-01-10 12:48:26,579 | INFO     | overall cleanup function is called
[2026-01-10 13:49:30] 2026-01-10 12:48:27,588 | INFO     | --- collectZombieJob: --- 10, [28054]
[2026-01-10 13:49:30] 2026-01-10 12:48:27,588 | INFO     | zombie collector waiting for pid 28054
[2026-01-10 13:49:30] 2026-01-10 12:48:27,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:49:30] 2026-01-10 12:48:27,589 | INFO     | collected zombie processes
[2026-01-10 13:49:30] 2026-01-10 12:48:27,589 | INFO     | will attempt to kill all subprocesses of pid=28054
[2026-01-10 13:49:30] 2026-01-10 12:48:27,678 | INFO     | process IDs to be killed: [28054] (in reverse order)
[2026-01-10 13:49:30] 2026-01-10 12:48:28,638 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:49:30] 2026-01-10 12:48:28,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:49:30] 2026-01-10 12:48:28,640 | INFO     | did not find any defunct processes belonging to 28054
[2026-01-10 13:49:30] 2026-01-10 12:48:28,642 | INFO     | did not find any defunct processes belonging to 28054
[2026-01-10 13:49:30] 2026-01-10 12:48:28,642 | INFO     | ready for new job
[2026-01-10 13:49:30] 2026-01-10 12:48:28,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:49:30] 2026-01-10 12:48:28,644 | INFO     | ***************************************
[2026-01-10 13:49:30] 2026-01-10 12:48:28,645 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:49:30] 2026-01-10 12:48:28,645 | INFO     | ***************************************
[2026-01-10 13:49:30] 2026-01-10 12:48:28,645 | INFO     | 
[2026-01-10 13:49:30] 2026-01-10 12:48:28,645 | INFO     | pilot is running in a VM
[2026-01-10 13:49:30] 2026-01-10 12:48:28,646 | INFO     | architecture information:
[2026-01-10 13:49:30] 2026-01-10 12:48:28,649 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:49:30] 2026-01-10 12:48:28,958 | INFO     | cat /etc/os-release:
[2026-01-10 13:49:30] NAME="CentOS Linux"
[2026-01-10 13:49:30] VERSION="7 (Core)"
[2026-01-10 13:49:30] ID="centos"
[2026-01-10 13:49:30] ID_LIKE="rhel fedora"
[2026-01-10 13:49:30] VERSION_ID="7"
[2026-01-10 13:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:49:30] ANSI_COLOR="0;31"
[2026-01-10 13:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:49:30] HOME_URL="https://www.centos.org/"
[2026-01-10 13:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:49:30] 
[2026-01-10 13:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:49:30] 
[2026-01-10 13:49:30] 2026-01-10 12:48:28,959 | INFO     | ***************************************
[2026-01-10 13:49:30] 2026-01-10 12:48:29,462 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-10 13:49:30] 2026-01-10 12:48:29,670 | INFO     | sufficient remaining disk space (496944283648 B)
[2026-01-10 13:49:30] 2026-01-10 12:48:29,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:49:30] 2026-01-10 12:48:29,671 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:49:30] 2026-01-10 12:48:29,671 | INFO     | update_server=False
[2026-01-10 13:49:30] 2026-01-10 12:48:29,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:49:30] 2026-01-10 12:48:29,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:49:30] 2026-01-10 12:48:29,783 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 13:49:30] 2026-01-10 12:48:29,783 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 13:49:30] 2026-01-10 12:48:29,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:49:30] 2026-01-10 12:48:29,784 | INFO     | will abort loop
[2026-01-10 13:49:30] 2026-01-10 12:48:29,888 | INFO     | all payload control threads have been joined
[2026-01-10 13:49:30] 2026-01-10 12:48:30,330 | INFO     | all data control threads have been joined
[2026-01-10 13:49:30] 2026-01-10 12:48:30,677 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:30,732 | INFO     | all job control threads have been joined
[2026-01-10 13:49:30] 2026-01-10 12:48:30,756 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:30,789 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:30,894 | INFO     | [payload] control thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:49:30] 2026-01-10 12:48:31,225 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,272 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,336 | INFO     | [data] control thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,471 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,601 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,679 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,703 | INFO     | [job] validate thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,738 | INFO     | [job] control thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:31,775 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:32,095 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:32,130 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:33,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:49:30] 2026-01-10 12:48:37,089 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:49:30] 2026-01-10 12:48:58,488 | INFO     | PID=21606 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 13:49:30] 2026-01-10 12:48:58,488 | INFO     | .. there are 2 such processes running
[2026-01-10 13:49:30] 2026-01-10 12:48:58,489 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:49:30] 2026-01-10 12:48:58,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:49:30] 2026-01-10 12:48:58,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:49:30] 2026-01-10 12:49:17,474 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:49:30] 2026-01-10 12:49:19,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679499560768)>', '<ExcThread(monitor, started 140679195895552)>']
[2026-01-10 13:49:30] 2026-01-10 12:49:19,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:49:30] 2026-01-10 12:49:19,611 | INFO     | [monitor] control thread has ended
[2026-01-10 13:49:30] 2026-01-10 12:49:24,058 | INFO     | all workflow threads have been joined
[2026-01-10 13:49:30] 2026-01-10 12:49:24,058 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:49:30] 2026-01-10 12:49:24,059 | INFO     | traces error code: 0
[2026-01-10 13:49:30] 2026-01-10 12:49:24,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:49:30] 2026-01-10 12:49:24,540 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:49:30] 2026-01-10 12:49:24,643 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:49:30] 2026-01-10 12:49:24,744 [wrapper] pilotpid: 21606
[2026-01-10 13:49:30] 2026-01-10 12:49:24,826 [wrapper] Pilot exit status: 0
[2026-01-10 13:49:30] 2026-01-10 12:49:25,294 [wrapper] pandaids: 6963144314
[2026-01-10 13:49:30] 2026-01-10 12:49:26,327 [wrapper] cleanup supervisor_pilot 27257 21607
[2026-01-10 13:49:30] 2026-01-10 12:49:26,412 [wrapper] Test setup, not cleaning
[2026-01-10 13:49:30] 2026-01-10 12:49:26,521 [wrapper] apfmon messages muted
[2026-01-10 13:49:30] 2026-01-10 12:49:26,623 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:49:30] 2026-01-10 12:49:26,723 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:49:30]  *** Error codes and diagnostics ***
[2026-01-10 13:49:30]     "exeErrorCode": 0,
[2026-01-10 13:49:30]     "exeErrorDiag": "",
[2026-01-10 13:49:30]     "pilotErrorCode": 0,
[2026-01-10 13:49:30]     "pilotErrorDiag": "",
[2026-01-10 13:49:30]  *** Listing of results directory ***
[2026-01-10 13:49:30] total 451568
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:19 queuedata.json
[2026-01-10 13:49:30] -rwx------. 1 boinc boinc     36322 Jan  8 13:19 runpilot2-wrapper.sh
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc       100 Jan 10 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:49:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 07:47 run_atlas
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc       105 Jan 10 07:47 job.xml
[2026-01-10 13:49:30] -rw-r--r--. 2 boinc boinc 228457547 Jan 10 07:47 EVNT.47898824._001015.pool.root.1
[2026-01-10 13:49:30] drwxrwx--x. 2 boinc boinc        68 Jan 10 07:47 shared
[2026-01-10 13:49:30] -rw-r--r--. 2 boinc boinc    592397 Jan 10 07:47 input.tar.gz
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc      6392 Jan 10 07:47 init_data.xml
[2026-01-10 13:49:30] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:47 start_atlas.sh
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc         0 Jan 10 07:47 boinc_lockfile
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc      2518 Jan 10 07:47 pandaJob.out
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc    989374 Jan 10 07:52 agis_schedconf.cvmfs.json
[2026-01-10 13:49:30] drwx------. 5 boinc boinc      4096 Jan 10 07:52 pilot3
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc 223291168 Jan 10 13:44 HITS.47898826._025525.pool.root.1
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc       531 Jan 10 13:45 boinc_task_state.xml
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc      1013 Jan 10 13:46 memory_monitor_summary.json
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc   1516240 Jan 10 13:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc    539604 Jan 10 13:46 log.47898826._025525.job.log.tgz.1
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc      7772 Jan 10 13:48 heartbeat.json
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc        95 Jan 10 13:48 pilot_heartbeat.json
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc        28 Jan 10 13:49 wrapper_checkpoint.txt
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc      8192 Jan 10 13:49 boinc_mmap_file
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc      5071 Jan 10 13:49 pilotlog.txt
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc   2841237 Jan 10 13:49 log.47898826._025525.job.log.1
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc       357 Jan 10 13:49 output.list
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc       620 Jan 10 13:49 runtime_log
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc   3399680 Jan 10 13:49 result.tar.gz
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc      8833 Jan 10 13:49 runtime_log.err
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc       657 Jan 10 13:49 EH1LDmUA4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRJfKDmKZ8ivn.diag
[2026-01-10 13:49:30] -rw-r--r--. 1 boinc boinc     20789 Jan 10 13:49 stderr.txt
[2026-01-10 13:49:30] HITS file was successfully produced:
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc 223291168 Jan 10 13:44 shared/HITS.pool.root.1
[2026-01-10 13:49:30]  *** Contents of shared directory: ***
[2026-01-10 13:49:30] total 445080
[2026-01-10 13:49:30] -rw-r--r--. 2 boinc boinc 228457547 Jan 10 07:47 ATLAS.root_0
[2026-01-10 13:49:30] -rw-r--r--. 2 boinc boinc    592397 Jan 10 07:47 input.tar.gz
[2026-01-10 13:49:30] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:47 start_atlas.sh
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc 223291168 Jan 10 13:44 HITS.pool.root.1
[2026-01-10 13:49:30] -rw-------. 1 boinc boinc   3399680 Jan 10 13:49 result.tar.gz
13:49:32 (17848): run_atlas exited; CPU time 78614.434045
13:49:32 (17848): called boinc_finish(0)

</stderr_txt>
]]>

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