Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:22:44 (357471): wrapper (7.7.26015): starting
05:22:44 (357471): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 05:22:44] Arguments: --nthreads 4
[2026-01-11 05:22:44] Threads: 4
[2026-01-11 05:22:44] Checking for CVMFS
[2026-01-11 05:22:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:22:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:22:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:22:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:22:44] 2.13.3.0 1712136 5227 58272 155004 1 188 4175059 4194305 1836 130560 41 7598696 99.966 572513 191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 05:22:44] CVMFS is ok
[2026-01-11 05:22:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:22:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 05:22:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 05:22:44] Further information can be found at the LHC@home message board.
[2026-01-11 05:22:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:22:44] Checking for apptainer binary...
[2026-01-11 05:22:44] apptainer is not installed, using version from CVMFS
[2026-01-11 05:22:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:22:44] Ryze
[2026-01-11 05:22:44] apptainer works
[2026-01-11 05:22:44] Set ATHENA_PROC_NUMBER=4
[2026-01-11 05:22:44] Set ATHENA_CORE_NUMBER=4
[2026-01-11 05:22:44] Starting ATLAS job with PandaID=6964539169
[2026-01-11 05:22:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:51:11]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:51:11] 2026-01-11 06:50:12,605 | INFO     | monitor loop #668: job 0:6964539169 is in state 'finished'
[2026-01-11 07:51:11] 2026-01-11 06:50:12,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:51:11] 2026-01-11 06:50:13,866 | INFO     | time since job start (8841s) is within the limit (349056.0s)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,108 | INFO     | monitor loop #669: job 0:6964539169 is in state 'finished'
[2026-01-11 07:51:11] 2026-01-11 06:50:15,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,552 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:51:11] 2026-01-11 06:50:15,555 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3642.149958333333
[2026-01-11 07:51:11] 2026-01-11 06:50:15,559 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6964539169/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,559 | INFO     | extracted standard info from prmon json
[2026-01-11 07:51:11] 2026-01-11 06:50:15,559 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:51:11] 2026-01-11 06:50:15,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:51:11] 2026-01-11 06:50:15,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:51:11] 2026-01-11 06:50:15,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:51:11] 2026-01-11 06:50:15,562 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:51:11] 2026-01-11 06:50:15,562 | INFO     | sum of square deviations: 945282840.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,562 | INFO     | sum of deviations: -3843001097.9999995
[2026-01-11 07:51:11] 2026-01-11 06:50:15,562 | INFO     | mean x: 1768109786.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,562 | INFO     | mean y: 2360809.8620689656
[2026-01-11 07:51:11] 2026-01-11 06:50:15,563 | INFO     | intersect: 7190524565.14884
[2026-01-11 07:51:11] 2026-01-11 06:50:15,563 | INFO     | chi2: 1.489095499884705
[2026-01-11 07:51:11] 2026-01-11 06:50:15,563 | INFO     | sum of square deviations: 850825255.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | sum of deviations: -3647541756.4999995
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | mean x: 1768109633.5
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | mean y: 2361124.7357142856
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | intersect: 7582359109.470148
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | chi2: 1.4882769425938893
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | current chi2=1.4882769425938893 (change=0.05497010036489132 %)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | right removable region: 139
[2026-01-11 07:51:11] 2026-01-11 06:50:15,564 | INFO     | sum of square deviations: 850825255.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | sum of deviations: -21654716960.000004
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | mean x: 1768109938.5
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | mean y: 2388994.1714285715
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | intersect: 45003310214.334915
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | chi2: 0.0858426623047644
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | current chi2=0.0858426623047644 (change=94.2352480205997 %)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,565 | INFO     | sum of square deviations: 762879420.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | sum of deviations: -19596067854.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | mean x: 1768110091.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | mean y: 2385415.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | intersect: 45419792685.70356
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | chi2: 0.08565293998296403
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | current chi2=0.08565293998296403 (change=0.2210116936108091 %)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,566 | INFO     | left removable region: 20
[2026-01-11 07:51:11] 2026-01-11 06:50:15,567 | INFO     | sum of square deviations: 522502820.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,567 | INFO     | sum of deviations: -13546523638.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,567 | INFO     | mean x: 1768110213.0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,567 | INFO     | mean y: 2375913.1092436975
[2026-01-11 07:51:11] 2026-01-11 06:50:15,567 | INFO     | intersect: 45842792228.936424
[2026-01-11 07:51:11] 2026-01-11 06:50:15,567 | INFO     | chi2: 0.07761196782747853
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | current memory leak: -25.93 B/s (using 119 data points, chi2=0.08)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | could have reported an average CPU frequency of 3703 MHz (8 samples)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | ..............................
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . Timing measurements:
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . get job = 0 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . initial setup = 1 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . payload setup = 4 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . stage-in = 0 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . payload execution = 8812 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . stage-out = 0 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | . log creation = 0 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,568 | INFO     | ..............................
[2026-01-11 07:51:11] 2026-01-11 06:50:15,634 | INFO     | 
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | job summary report
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | --------------------------------------------------
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | PanDA job id: 6964539169
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | task id: 47898826
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | errors: (none)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | pilot state: finished 
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | transexitcode: 0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | exeerrorcode: 0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | exeerrordiag: 
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | exitcode: 0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | exitmsg: OK
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | cpuconsumptiontime: 34344 s
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | nevents: 400
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | neventsw: 0
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | pid: 367863
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | pgrp: 367863
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | corecount: 4
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | event service: False
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | sizes: {0: 2283925, 3: 2284187, 11: 2284215, 8820: 2312540, 8821: 2321552, 8823: 2321608, 8829: 2321930}
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | --------------------------------------------------
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | 
[2026-01-11 07:51:11] 2026-01-11 06:50:15,635 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | job 6964539169 has completed (purged errors)
[2026-01-11 07:51:11] 2026-01-11 06:50:15,658 | INFO     | overall cleanup function is called
[2026-01-11 07:51:11] 2026-01-11 06:50:16,666 | INFO     | --- collectZombieJob: --- 10, [367863]
[2026-01-11 07:51:11] 2026-01-11 06:50:16,666 | INFO     | zombie collector waiting for pid 367863
[2026-01-11 07:51:11] 2026-01-11 06:50:16,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:51:11] 2026-01-11 06:50:16,666 | INFO     | collected zombie processes
[2026-01-11 07:51:11] 2026-01-11 06:50:16,666 | INFO     | will attempt to kill all subprocesses of pid=367863
[2026-01-11 07:51:11] 2026-01-11 06:50:16,767 | INFO     | process IDs to be killed: [367863] (in reverse order)
[2026-01-11 07:51:11] 2026-01-11 06:50:16,818 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:51:11] 2026-01-11 06:50:16,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:51:11] 2026-01-11 06:50:16,822 | INFO     | did not find any defunct processes belonging to 367863
[2026-01-11 07:51:11] 2026-01-11 06:50:16,825 | INFO     | did not find any defunct processes belonging to 367863
[2026-01-11 07:51:11] 2026-01-11 06:50:16,825 | INFO     | ready for new job
[2026-01-11 07:51:11] 2026-01-11 06:50:16,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:51:11] 2026-01-11 06:50:16,827 | INFO     | ***************************************
[2026-01-11 07:51:11] 2026-01-11 06:50:16,827 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:51:11] 2026-01-11 06:50:16,827 | INFO     | ***************************************
[2026-01-11 07:51:11] 2026-01-11 06:50:16,827 | INFO     | 
[2026-01-11 07:51:11] 2026-01-11 06:50:16,828 | INFO     | architecture information:
[2026-01-11 07:51:11] 2026-01-11 06:50:16,829 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:51:11] 2026-01-11 06:50:16,845 | INFO     | cat /etc/os-release:
[2026-01-11 07:51:11] NAME="CentOS Linux"
[2026-01-11 07:51:11] VERSION="7 (Core)"
[2026-01-11 07:51:11] ID="centos"
[2026-01-11 07:51:11] ID_LIKE="rhel fedora"
[2026-01-11 07:51:11] VERSION_ID="7"
[2026-01-11 07:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:51:11] ANSI_COLOR="0;31"
[2026-01-11 07:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:51:11] HOME_URL="https://www.centos.org/"
[2026-01-11 07:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:51:11] 
[2026-01-11 07:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:51:11] 
[2026-01-11 07:51:11] 2026-01-11 06:50:16,845 | INFO     | ***************************************
[2026-01-11 07:51:11] 2026-01-11 06:50:17,348 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-11 07:51:11] 2026-01-11 06:50:17,365 | INFO     | sufficient remaining disk space (3070585995264 B)
[2026-01-11 07:51:11] 2026-01-11 06:50:17,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:51:11] 2026-01-11 06:50:17,365 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:51:11] 2026-01-11 06:50:17,365 | INFO     | update_server=False
[2026-01-11 07:51:11] 2026-01-11 06:50:17,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:51:11] 2026-01-11 06:50:17,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:51:11] 2026-01-11 06:50:17,611 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 07:51:11] 2026-01-11 06:50:17,612 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 07:51:11] 2026-01-11 06:50:17,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:51:11] 2026-01-11 06:50:17,612 | INFO     | will abort loop
[2026-01-11 07:51:11] 2026-01-11 06:50:17,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:51:11] 2026-01-11 06:50:17,652 | INFO     | all job control threads have been joined
[2026-01-11 07:51:11] 2026-01-11 06:50:17,938 | INFO     | all data control threads have been joined
[2026-01-11 07:51:11] 2026-01-11 06:50:18,370 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:18,371 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:18,566 | INFO     | all payload control threads have been joined
[2026-01-11 07:51:11] 2026-01-11 06:50:18,617 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:18,657 | INFO     | [job] control thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:18,770 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:18,914 | INFO     | [job] validate thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:18,943 | INFO     | [data] control thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,038 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,107 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,269 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,409 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:51:11] 2026-01-11 06:50:19,571 | INFO     | [payload] control thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,652 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:19,824 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:23,521 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:28,048 | INFO     | job.realtimelogging is not enabled
[2026-01-11 07:51:11] 2026-01-11 06:50:29,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:51:11] 2026-01-11 06:50:45,914 | INFO     | 8845s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 07:51:11] 2026-01-11 06:50:47,069 | INFO     | PID=361277 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 07:51:11] 2026-01-11 06:50:47,069 | INFO     | .. there are 3 such processes running
[2026-01-11 07:51:11] 2026-01-11 06:50:47,070 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:51:11] 2026-01-11 06:50:47,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:51:11] 2026-01-11 06:50:47,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:51:11] 2026-01-11 06:51:05,407 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:51:11] 2026-01-11 06:51:05,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127148507645760)>', '<ExcThread(monitor, started 127147540739840)>']
[2026-01-11 07:51:11] 2026-01-11 06:51:06,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:51:11] 2026-01-11 06:51:06,164 | INFO     | [monitor] control thread has ended
[2026-01-11 07:51:11] 2026-01-11 06:51:10,870 | INFO     | all workflow threads have been joined
[2026-01-11 07:51:11] 2026-01-11 06:51:10,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:51:11] 2026-01-11 06:51:10,870 | INFO     | traces error code: 0
[2026-01-11 07:51:11] 2026-01-11 06:51:10,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:51:11] 2026-01-11 06:51:10,953 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:51:11] 2026-01-11 06:51:10,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:51:11] 2026-01-11 06:51:10,957 [wrapper] pilotpid: 361277
[2026-01-11 07:51:11] 2026-01-11 06:51:10,959 [wrapper] Pilot exit status: 0
[2026-01-11 07:51:11] 2026-01-11 06:51:10,967 [wrapper] pandaids: 6964539169
[2026-01-11 07:51:11] 2026-01-11 06:51:11,000 [wrapper] cleanup supervisor_pilot  431563 361278
[2026-01-11 07:51:11] 2026-01-11 06:51:11,002 [wrapper] Test setup, not cleaning
[2026-01-11 07:51:11] 2026-01-11 06:51:11,004 [wrapper] apfmon messages muted
[2026-01-11 07:51:11] 2026-01-11 06:51:11,006 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:51:11] 2026-01-11 06:51:11,008 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:51:11]  *** Error codes and diagnostics ***
[2026-01-11 07:51:11]     "exeErrorCode": 0,
[2026-01-11 07:51:11]     "exeErrorDiag": "",
[2026-01-11 07:51:11]     "pilotErrorCode": 0,
[2026-01-11 07:51:11]     "pilotErrorDiag": "",
[2026-01-11 07:51:11]  *** Listing of results directory ***
[2026-01-11 07:51:11] insgesamt 441560
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc      5112 Jan  9 16:55 queuedata.json
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-11 07:51:11] -rwx------ 1 boinc boinc     36322 Jan  9 16:56 runpilot2-wrapper.sh
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc       100 Jan 11 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:51:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 05:22 run_atlas
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc       105 Jan 11 05:22 job.xml
[2026-01-11 07:51:11] -rw-r--r-- 2 boinc boinc 223501516 Jan 11 05:22 EVNT.47898824._000899.pool.root.1
[2026-01-11 07:51:11] -rw-r--r-- 2 boinc boinc    592405 Jan 11 05:22 input.tar.gz
[2026-01-11 07:51:11] -rw-r--r-- 2 boinc boinc     15847 Jan 11 05:22 start_atlas.sh
[2026-01-11 07:51:11] drwxrwx--x 2 boinc boinc      4096 Jan 11 05:22 shared
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc         0 Jan 11 05:22 boinc_setup_complete
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc      8869 Jan 11 05:22 init_data.xml
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc         0 Jan 11 05:22 boinc_lockfile
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc      2518 Jan 11 05:22 pandaJob.out
[2026-01-11 07:51:11] -rw------- 1 boinc boinc    989548 Jan 11 05:22 agis_schedconf.cvmfs.json
[2026-01-11 07:51:11] -rw------- 1 boinc boinc   1516240 Jan 11 05:22 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:51:11] drwx------ 5 boinc boinc      4096 Jan 11 05:22 pilot3
[2026-01-11 07:51:11] -rw------- 1 boinc boinc 221519086 Jan 11 07:49 HITS.47898826._040053.pool.root.1
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc       529 Jan 11 07:49 boinc_task_state.xml
[2026-01-11 07:51:11] -rw------- 1 boinc boinc      1018 Jan 11 07:50 memory_monitor_summary.json
[2026-01-11 07:51:11] -rw------- 1 boinc boinc    319293 Jan 11 07:50 log.47898826._040053.job.log.tgz.1
[2026-01-11 07:51:11] -rw------- 1 boinc boinc        95 Jan 11 07:50 pilot_heartbeat.json
[2026-01-11 07:51:11] -rw------- 1 boinc boinc      7727 Jan 11 07:50 heartbeat.json
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc        27 Jan 11 07:50 wrapper_checkpoint.txt
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc      8192 Jan 11 07:50 boinc_mmap_file
[2026-01-11 07:51:11] -rw------- 1 boinc boinc      5204 Jan 11 07:51 pilotlog.txt
[2026-01-11 07:51:11] -rw------- 1 boinc boinc   1290765 Jan 11 07:51 log.47898826._040053.job.log.1
[2026-01-11 07:51:11] -rw------- 1 boinc boinc       357 Jan 11 07:51 output.list
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc       620 Jan 11 07:51 runtime_log
[2026-01-11 07:51:11] -rw------- 1 boinc boinc   1628160 Jan 11 07:51 result.tar.gz
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc      8859 Jan 11 07:51 runtime_log.err
[2026-01-11 07:51:11] -rw------- 1 boinc boinc       636 Jan 11 07:51 3btNDmO1Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqdmKDmDebW0n.diag
[2026-01-11 07:51:11] -rw-r--r-- 1 boinc boinc     21364 Jan 11 07:51 stderr.txt
[2026-01-11 07:51:11] HITS file was successfully produced:
[2026-01-11 07:51:11] -rw------- 1 boinc boinc 221519086 Jan 11 07:49 shared/HITS.pool.root.1
[2026-01-11 07:51:11]  *** Contents of shared directory: ***
[2026-01-11 07:51:11] insgesamt 436788
[2026-01-11 07:51:11] -rw-r--r-- 2 boinc boinc 223501516 Jan 11 05:22 ATLAS.root_0
[2026-01-11 07:51:11] -rw-r--r-- 2 boinc boinc    592405 Jan 11 05:22 input.tar.gz
[2026-01-11 07:51:11] -rw-r--r-- 2 boinc boinc     15847 Jan 11 05:22 start_atlas.sh
[2026-01-11 07:51:11] -rw------- 1 boinc boinc 221519086 Jan 11 07:49 HITS.pool.root.1
[2026-01-11 07:51:11] -rw------- 1 boinc boinc   1628160 Jan 11 07:51 result.tar.gz
07:51:13 (357471): run_atlas exited; CPU time 34420.891600
07:51:13 (357471): called boinc_finish(0)

</stderr_txt>
]]>

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