Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:17:55 (28497): wrapper (7.7.26015): starting
01:17:55 (28497): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 01:17:55] Arguments: --nthreads 8
[2026-01-11 01:17:55] Threads: 8
[2026-01-11 01:17:55] Checking for CVMFS
[2026-01-11 01:17:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 01:17:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 01:17:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 01:17:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 01:17:58] 2.11.2.0 28330 37564 127580 154998 1 18 19650879 25165824 96 130560 0 16073354 99.790 11032905 3985 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-11 01:17:58] CVMFS is ok
[2026-01-11 01:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:17:58] Checking for apptainer binary...
[2026-01-11 01:17:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 01:17:58] Running /usr/bin/apptainer --version
[2026-01-11 01:17:59] apptainer version 1.3.2-1.el7
[2026-01-11 01:17:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:18:17] cg-vwn377.simple-grid.lan
[2026-01-11 01:18:17] apptainer works
[2026-01-11 01:18:18] Set ATHENA_PROC_NUMBER=8
[2026-01-11 01:18:18] Set ATHENA_CORE_NUMBER=8
[2026-01-11 01:18:18] Starting ATLAS job with PandaID=6964539149
[2026-01-11 01:18:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:23:32]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:23:32] 2026-01-11 06:22:25,518 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:23:32] 2026-01-11 06:22:25,519 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 07:23:32] 2026-01-11 06:22:25,521 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6964539149/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,521 | INFO     | extracted standard info from prmon json
[2026-01-11 07:23:32] 2026-01-11 06:22:25,522 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:23:32] 2026-01-11 06:22:25,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:23:32] 2026-01-11 06:22:25,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:23:32] 2026-01-11 06:22:25,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:23:32] 2026-01-11 06:22:25,535 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:23:32] 2026-01-11 06:22:25,535 | INFO     | sum of square deviations: 12622636670.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,539 | INFO     | sum of deviations: 125359745647.50005
[2026-01-11 07:23:32] 2026-01-11 06:22:25,540 | INFO     | mean x: 1768101956.5
[2026-01-11 07:23:32] 2026-01-11 06:22:25,540 | INFO     | mean y: 2447465.543604651
[2026-01-11 07:23:32] 2026-01-11 06:22:25,540 | INFO     | intersect: -17557181108.134354
[2026-01-11 07:23:32] 2026-01-11 06:22:25,540 | INFO     | chi2: 9.437761986597874
[2026-01-11 07:23:32] 2026-01-11 06:22:25,541 | INFO     | sum of square deviations: 12080189290.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,551 | INFO     | sum of deviations: 169717138857.99994
[2026-01-11 07:23:32] 2026-01-11 06:22:25,551 | INFO     | mean x: 1768101804.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,552 | INFO     | mean y: 2459821.469026549
[2026-01-11 07:23:32] 2026-01-11 06:22:25,552 | INFO     | intersect: -24837977044.280468
[2026-01-11 07:23:32] 2026-01-11 06:22:25,552 | INFO     | chi2: 7.9390760361101815
[2026-01-11 07:23:32] 2026-01-11 06:22:25,552 | INFO     | current chi2=7.9390760361101815 (change=15.879675209185255 %)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,553 | INFO     | right removable region: 338
[2026-01-11 07:23:32] 2026-01-11 06:22:25,553 | INFO     | sum of square deviations: 12080189290.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,557 | INFO     | sum of deviations: 2901917619.9999924
[2026-01-11 07:23:32] 2026-01-11 06:22:25,557 | INFO     | mean x: 1768102109.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,557 | INFO     | mean y: 2481880.0265486725
[2026-01-11 07:23:32] 2026-01-11 06:22:25,557 | INFO     | intersect: -422253738.0083114
[2026-01-11 07:23:32] 2026-01-11 06:22:25,558 | INFO     | chi2: 4.418440496637264
[2026-01-11 07:23:32] 2026-01-11 06:22:25,558 | INFO     | current chi2=4.418440496637264 (change=53.18338708995114 %)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,559 | INFO     | sum of square deviations: 11553509647.5
[2026-01-11 07:23:32] 2026-01-11 06:22:25,563 | INFO     | sum of deviations: -84897041152.99998
[2026-01-11 07:23:32] 2026-01-11 06:22:25,563 | INFO     | mean x: 1768102261.5
[2026-01-11 07:23:32] 2026-01-11 06:22:25,563 | INFO     | mean y: 2507268.431137725
[2026-01-11 07:23:32] 2026-01-11 06:22:25,563 | INFO     | intersect: 12994806148.776867
[2026-01-11 07:23:32] 2026-01-11 06:22:25,564 | INFO     | chi2: 1.9217063110019788
[2026-01-11 07:23:32] 2026-01-11 06:22:25,564 | INFO     | current chi2=1.9217063110019788 (change=56.507136115909475 %)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,564 | INFO     | sum of square deviations: 11042365180.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,573 | INFO     | sum of deviations: -97237741678.99997
[2026-01-11 07:23:32] 2026-01-11 06:22:25,574 | INFO     | mean x: 1768102414.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,574 | INFO     | mean y: 2510929.6838905774
[2026-01-11 07:23:32] 2026-01-11 06:22:25,574 | INFO     | intersect: 15572208452.995491
[2026-01-11 07:23:32] 2026-01-11 06:22:25,574 | INFO     | chi2: 1.8307565594928294
[2026-01-11 07:23:32] 2026-01-11 06:22:25,575 | INFO     | current chi2=1.8307565594928294 (change=4.732760203182559 %)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,575 | INFO     | left removable region: 30
[2026-01-11 07:23:32] 2026-01-11 06:22:25,575 | INFO     | sum of square deviations: 9059954057.0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,578 | INFO     | sum of deviations: -22533310939.999996
[2026-01-11 07:23:32] 2026-01-11 06:22:25,579 | INFO     | mean x: 1768102688.5
[2026-01-11 07:23:32] 2026-01-11 06:22:25,579 | INFO     | mean y: 2515312.922077922
[2026-01-11 07:23:32] 2026-01-11 06:22:25,579 | INFO     | intersect: 4400021901.052943
[2026-01-11 07:23:32] 2026-01-11 06:22:25,579 | INFO     | chi2: 0.13304412372628885
[2026-01-11 07:23:32] 2026-01-11 06:22:25,580 | INFO     | current memory leak: -2.49 B/s (using 308 data points, chi2=0.13)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,580 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | ..............................
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . Timing measurements:
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . get job = 0 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . initial setup = 7 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . payload setup = 143 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . stage-in = 0 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . payload execution = 21103 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . stage-out = 3 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | . log creation = 1 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,581 | INFO     | ..............................
[2026-01-11 07:23:32] 2026-01-11 06:22:25,732 | INFO     | 
[2026-01-11 07:23:32] 2026-01-11 06:22:25,732 | INFO     | job summary report
[2026-01-11 07:23:32] 2026-01-11 06:22:25,732 | INFO     | --------------------------------------------------
[2026-01-11 07:23:32] 2026-01-11 06:22:25,732 | INFO     | PanDA job id: 6964539149
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | task id: 47898826
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | errors: (none)
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | pilot state: finished 
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | transexitcode: 0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | exeerrorcode: 0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | exeerrordiag: 
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | exitcode: 0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,733 | INFO     | exitmsg: OK
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | cpuconsumptiontime: 79374 s
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | nevents: 400
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | neventsw: 0
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | pid: 6315
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | pgrp: 6315
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | corecount: 8
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | event service: False
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | sizes: {0: 2283693, 1: 2283948, 12: 2283948, 23: 2283976, 33: 2284004, 44: 2284060, 55: 2284216, 66: 2284244, 76: 2284272, 87: 2284328, 98: 2284356, 104: 2284926, 
[2026-01-11 07:23:32] 2026-01-11 06:22:25,734 | INFO     | --------------------------------------------------
[2026-01-11 07:23:32] 2026-01-11 06:22:25,735 | INFO     | 
[2026-01-11 07:23:32] 2026-01-11 06:22:25,735 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-11 07:23:32] 2026-01-11 06:22:26,325 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:23:32] 2026-01-11 06:22:26,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,328 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:23:32] 2026-01-11 06:22:26,328 | INFO     | job 6964539149 has completed (purged errors)
[2026-01-11 07:23:32] 2026-01-11 06:22:26,328 | INFO     | overall cleanup function is called
[2026-01-11 07:23:32] 2026-01-11 06:22:27,337 | INFO     | --- collectZombieJob: --- 10, [6315]
[2026-01-11 07:23:32] 2026-01-11 06:22:27,337 | INFO     | zombie collector waiting for pid 6315
[2026-01-11 07:23:32] 2026-01-11 06:22:27,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:23:32] 2026-01-11 06:22:27,337 | INFO     | collected zombie processes
[2026-01-11 07:23:32] 2026-01-11 06:22:27,338 | INFO     | will attempt to kill all subprocesses of pid=6315
[2026-01-11 07:23:32] 2026-01-11 06:22:27,416 | INFO     | process IDs to be killed: [6315] (in reverse order)
[2026-01-11 07:23:32] 2026-01-11 06:22:28,136 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:23:32] 2026-01-11 06:22:28,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:23:32] 2026-01-11 06:22:28,139 | INFO     | did not find any defunct processes belonging to 6315
[2026-01-11 07:23:32] 2026-01-11 06:22:28,148 | INFO     | did not find any defunct processes belonging to 6315
[2026-01-11 07:23:32] 2026-01-11 06:22:28,148 | INFO     | ready for new job
[2026-01-11 07:23:32] 2026-01-11 06:22:28,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:23:32] 2026-01-11 06:22:28,151 | INFO     | ***************************************
[2026-01-11 07:23:32] 2026-01-11 06:22:28,151 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:23:32] 2026-01-11 06:22:28,151 | INFO     | ***************************************
[2026-01-11 07:23:32] 2026-01-11 06:22:28,151 | INFO     | 
[2026-01-11 07:23:32] 2026-01-11 06:22:28,152 | INFO     | pilot is running in a VM
[2026-01-11 07:23:32] 2026-01-11 06:22:28,152 | INFO     | architecture information:
[2026-01-11 07:23:32] 2026-01-11 06:22:28,169 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:23:32] 2026-01-11 06:22:28,369 | INFO     | cat /etc/os-release:
[2026-01-11 07:23:32] NAME="CentOS Linux"
[2026-01-11 07:23:32] VERSION="7 (Core)"
[2026-01-11 07:23:32] ID="centos"
[2026-01-11 07:23:32] ID_LIKE="rhel fedora"
[2026-01-11 07:23:32] VERSION_ID="7"
[2026-01-11 07:23:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:23:32] ANSI_COLOR="0;31"
[2026-01-11 07:23:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:23:32] HOME_URL="https://www.centos.org/"
[2026-01-11 07:23:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:23:32] 
[2026-01-11 07:23:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:23:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:23:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:23:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:23:32] 
[2026-01-11 07:23:32] 2026-01-11 06:22:28,370 | INFO     | ***************************************
[2026-01-11 07:23:32] 2026-01-11 06:22:28,873 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-11 07:23:32] 2026-01-11 06:22:29,131 | INFO     | sufficient remaining disk space (496814260224 B)
[2026-01-11 07:23:32] 2026-01-11 06:22:29,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:23:32] 2026-01-11 06:22:29,131 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:23:32] 2026-01-11 06:22:29,131 | INFO     | update_server=False
[2026-01-11 07:23:32] 2026-01-11 06:22:29,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:23:32] 2026-01-11 06:22:29,199 | INFO     | all job control threads have been joined
[2026-01-11 07:23:32] 2026-01-11 06:22:29,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:23:32] 2026-01-11 06:22:29,493 | INFO     | aborting loop
[2026-01-11 07:23:32] 2026-01-11 06:22:29,603 | INFO     | all data control threads have been joined
[2026-01-11 07:23:32] 2026-01-11 06:22:29,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:23:32] 2026-01-11 06:22:30,141 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,158 | INFO     | all payload control threads have been joined
[2026-01-11 07:23:32] 2026-01-11 06:22:30,187 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,205 | INFO     | [job] control thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:23:32] 2026-01-11 06:22:30,499 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,609 | INFO     | [data] control thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,619 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,707 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:30,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:23:32] 2026-01-11 06:22:30,931 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,022 | INFO     | [job] validate thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,029 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,164 | INFO     | [payload] control thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,373 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,756 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:31,810 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:34,355 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:23:32] 2026-01-11 06:22:43,537 [wrapper] supervise_pilot (15 min periods counter: 25)
[2026-01-11 07:23:32] 2026-01-11 06:22:58,000 | INFO     | PID=32219 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:23:32] 2026-01-11 06:22:58,001 | INFO     | .. there are 2 such processes running
[2026-01-11 07:23:32] 2026-01-11 06:22:58,001 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:23:32] 2026-01-11 06:22:58,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:23:32] 2026-01-11 06:22:58,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:23:32] 2026-01-11 06:23:20,209 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:23:32] 2026-01-11 06:23:21,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186870773568)>', '<ExcThread(monitor, started 140186407114496)>']
[2026-01-11 07:23:32] 2026-01-11 06:23:22,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:23:32] 2026-01-11 06:23:22,145 | INFO     | [monitor] control thread has ended
[2026-01-11 07:23:32] 2026-01-11 06:23:26,544 | INFO     | all workflow threads have been joined
[2026-01-11 07:23:32] 2026-01-11 06:23:26,544 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:23:32] 2026-01-11 06:23:26,545 | INFO     | traces error code: 0
[2026-01-11 07:23:32] 2026-01-11 06:23:26,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:23:32] 2026-01-11 06:23:26,948 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:23:32] 2026-01-11 06:23:26,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:23:32] 2026-01-11 06:23:27,118 [wrapper] pilotpid: 32219
[2026-01-11 07:23:32] 2026-01-11 06:23:27,224 [wrapper] Pilot exit status: 0
[2026-01-11 07:23:32] 2026-01-11 06:23:27,630 [wrapper] pandaids: 6964539149
[2026-01-11 07:23:32] 2026-01-11 06:23:28,514 [wrapper] cleanup supervisor_pilot  7951 32220
[2026-01-11 07:23:32] 2026-01-11 06:23:28,611 [wrapper] Test setup, not cleaning
[2026-01-11 07:23:32] 2026-01-11 06:23:28,707 [wrapper] apfmon messages muted
[2026-01-11 07:23:32] 2026-01-11 06:23:28,848 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:23:32] 2026-01-11 06:23:28,973 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:23:32]  *** Error codes and diagnostics ***
[2026-01-11 07:23:32]     "exeErrorCode": 0,
[2026-01-11 07:23:32]     "exeErrorDiag": "",
[2026-01-11 07:23:32]     "pilotErrorCode": 0,
[2026-01-11 07:23:32]     "pilotErrorDiag": "",
[2026-01-11 07:23:32]  *** Listing of results directory ***
[2026-01-11 07:23:32] total 444108
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:55 queuedata.json
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-11 07:23:32] -rwx------. 1 boinc boinc     36322 Jan  9 16:56 runpilot2-wrapper.sh
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc       100 Jan 11 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:23:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 01:17 run_atlas
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc       105 Jan 11 01:17 job.xml
[2026-01-11 07:23:32] -rw-r--r--. 2 boinc boinc 226913546 Jan 11 01:17 EVNT.47898824._001146.pool.root.1
[2026-01-11 07:23:32] -rw-r--r--. 2 boinc boinc     15847 Jan 11 01:17 start_atlas.sh
[2026-01-11 07:23:32] drwxrwx--x. 2 boinc boinc        68 Jan 11 01:17 shared
[2026-01-11 07:23:32] -rw-r--r--. 2 boinc boinc    592403 Jan 11 01:17 input.tar.gz
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc      6391 Jan 11 01:17 init_data.xml
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc         0 Jan 11 01:17 boinc_lockfile
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc      2519 Jan 11 01:18 pandaJob.out
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc    989540 Jan 11 01:22 agis_schedconf.cvmfs.json
[2026-01-11 07:23:32] drwx------. 5 boinc boinc      4096 Jan 11 01:22 pilot3
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc 217114794 Jan 11 07:18 HITS.47898826._040033.pool.root.1
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc       531 Jan 11 07:19 boinc_task_state.xml
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc      1011 Jan 11 07:20 memory_monitor_summary.json
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc   1516240 Jan 11 07:20 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc    559620 Jan 11 07:20 log.47898826._040033.job.log.tgz.1
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc        95 Jan 11 07:22 pilot_heartbeat.json
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc      7778 Jan 11 07:22 heartbeat.json
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc      8192 Jan 11 07:23 boinc_mmap_file
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc        28 Jan 11 07:23 wrapper_checkpoint.txt
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc      4884 Jan 11 07:23 pilotlog.txt
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc   2862377 Jan 11 07:23 log.47898826._040033.job.log.1
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc       357 Jan 11 07:23 output.list
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc       620 Jan 11 07:23 runtime_log
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc   3440640 Jan 11 07:23 result.tar.gz
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc      8817 Jan 11 07:23 runtime_log.err
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc       657 Jan 11 07:23 rOYMDmQ1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfThKDmKn5dDn.diag
[2026-01-11 07:23:32] -rw-r--r--. 1 boinc boinc     20762 Jan 11 07:23 stderr.txt
[2026-01-11 07:23:32] HITS file was successfully produced:
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc 217114794 Jan 11 07:18 shared/HITS.pool.root.1
[2026-01-11 07:23:32]  *** Contents of shared directory: ***
[2026-01-11 07:23:32] total 437580
[2026-01-11 07:23:32] -rw-r--r--. 2 boinc boinc 226913546 Jan 11 01:17 ATLAS.root_0
[2026-01-11 07:23:32] -rw-r--r--. 2 boinc boinc     15847 Jan 11 01:17 start_atlas.sh
[2026-01-11 07:23:32] -rw-r--r--. 2 boinc boinc    592403 Jan 11 01:17 input.tar.gz
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc 217114794 Jan 11 07:18 HITS.pool.root.1
[2026-01-11 07:23:32] -rw-------. 1 boinc boinc   3440640 Jan 11 07:23 result.tar.gz
07:23:33 (28497): run_atlas exited; CPU time 79577.786542
07:23:33 (28497): called boinc_finish(0)

</stderr_txt>
]]>

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