Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:36:53 (15684): wrapper (7.7.26015): starting
04:36:53 (15684): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:36:53] Arguments: --nthreads 8
[2026-01-10 04:36:53] Threads: 8
[2026-01-10 04:36:53] Checking for CVMFS
[2026-01-10 04:36:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:36:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:36:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:36:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:36:53] 2.11.0.0 8301 129926 103492 154966 1 128 3299378 4096001 562 130560 2 5073530 99.276 7376458 466 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 04:36:53] CVMFS is ok
[2026-01-10 04:36:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:36:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:36:53] Further information can be found at the LHC@home message board.
[2026-01-10 04:36:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:36:53] Checking for apptainer binary...
[2026-01-10 04:36:53] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 04:36:53] apptainer is not installed, using version from CVMFS
[2026-01-10 04:36:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:36:53] WARNING: Environment variable TMPDIR already has value [/tmp/job_11011009/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node228
[2026-01-10 04:36:53] apptainer works
[2026-01-10 04:36:53] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:36:53] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:36:53] Starting ATLAS job with PandaID=6963197058
[2026-01-10 04:36:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11011009/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:59:27]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:59:27] 2026-01-10 05:58:54,147 | INFO     | monitor loop #632: job 0:6963197058 is in state 'finished'
[2026-01-10 06:59:27] 2026-01-10 05:58:54,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,905 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:59:27] 2026-01-10 05:58:54,916 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2506.12696875
[2026-01-10 06:59:27] 2026-01-10 05:58:54,922 | INFO     | using path: /tmp/job_11011009/atlas/pilot/slots/0/PanDA_Pilot-6963197058/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,923 | INFO     | extracted standard info from prmon json
[2026-01-10 06:59:27] 2026-01-10 05:58:54,923 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:59:27] 2026-01-10 05:58:54,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:59:27] 2026-01-10 05:58:54,924 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:59:27] 2026-01-10 05:58:54,924 | INFO     | sum of square deviations: 850825255.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,925 | INFO     | sum of deviations: 26372969604.000008
[2026-01-10 06:59:27] 2026-01-10 05:58:54,925 | INFO     | mean x: 1768020475.5
[2026-01-10 06:59:27] 2026-01-10 05:58:54,925 | INFO     | mean y: 2793740.6714285715
[2026-01-10 06:59:27] 2026-01-10 05:58:54,925 | INFO     | intersect: -54800410543.163734
[2026-01-10 06:59:27] 2026-01-10 05:58:54,925 | INFO     | chi2: 3.2931074349485794
[2026-01-10 06:59:27] 2026-01-10 05:58:54,925 | INFO     | sum of square deviations: 762879420.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | sum of deviations: 52657248441.00001
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | mean x: 1768020323.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | mean y: 2838524.222222222
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | intersect: -122033597321.62622
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | chi2: 1.3993481690748615
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | current chi2=1.3993481690748615 (change=57.50675625629227 %)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | sum of square deviations: 681212772.5
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | sum of deviations: 49312098690.50001
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | mean x: 1768020170.5
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | mean y: 2832277.1615384617
[2026-01-10 06:59:27] 2026-01-10 05:58:54,926 | INFO     | intersect: -127981827808.59843
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | chi2: 1.3980517885770605
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | current chi2=1.3980517885770605 (change=0.09264174037959923 %)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | right removable region: 129
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | sum of square deviations: 762879420.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | sum of deviations: 2376347353.999998
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | mean x: 1768020628.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | mean y: 2834707.2296296298
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | intersect: -5504498471.538275
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | chi2: 1.958683229562428
[2026-01-10 06:59:27] 2026-01-10 05:58:54,927 | INFO     | current chi2=1.958683229562428 (change=40.521733096964326 %)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | sum of square deviations: 681212772.5
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | sum of deviations: -1684485232.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | mean x: 1768020780.5
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | mean y: 2842266.7230769233
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | intersect: 4374758083.409212
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | chi2: 1.9514722757488565
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | current chi2=1.9514722757488565 (change=0.36815314006554967 %)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | left removable region: 20
[2026-01-10 06:59:27] 2026-01-10 05:58:54,928 | INFO     | sum of square deviations: 401533110.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | sum of deviations: 14627200797.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | mean x: 1768020750.0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | mean y: 2903843.339449541
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | intersect: -64403228252.49827
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | chi2: 0.00416978743469393
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | current memory leak: 36.43 B/s (using 109 data points, chi2=0.00)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | could have reported an average CPU frequency of 2537 MHz (8 samples)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | ..............................
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | . Timing measurements:
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | . get job = 0 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | . initial setup = 1 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | . payload setup = 2 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,929 | INFO     | . stage-in = 0 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,930 | INFO     | . payload execution = 8491 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,930 | INFO     | . stage-out = 0 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,930 | INFO     | . log creation = 0 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,930 | INFO     | ..............................
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | 
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | job summary report
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | --------------------------------------------------
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | PanDA job id: 6963197058
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | task id: 47962010
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | errors: (none)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | pilot state: finished 
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | transexitcode: 0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | exeerrorcode: 0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | exeerrordiag: 
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | exitcode: 0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | exitmsg: OK
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | cpuconsumptiontime: 64514 s
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | nevents: 450
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | neventsw: 0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | pid: 8598
[2026-01-10 06:59:27] 2026-01-10 05:58:54,979 | INFO     | pgrp: 8598
[2026-01-10 06:59:27] 2026-01-10 05:58:54,980 | INFO     | corecount: 8
[2026-01-10 06:59:27] 2026-01-10 05:58:54,980 | INFO     | event service: False
[2026-01-10 06:59:27] 2026-01-10 05:58:54,980 | INFO     | sizes: {0: 2284746, 1: 2284746, 2: 2285036, 11: 2285064, 8498: 2313990, 8500: 2323198, 8503: 2323388}
[2026-01-10 06:59:27] 2026-01-10 05:58:54,980 | INFO     | --------------------------------------------------
[2026-01-10 06:59:27] 2026-01-10 05:58:54,980 | INFO     | 
[2026-01-10 06:59:27] 2026-01-10 05:58:54,980 | INFO     | executing command: ls -lF /tmp/job_11011009/atlas/pilot/slots/0
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | job 6963197058 has completed (purged errors)
[2026-01-10 06:59:27] 2026-01-10 05:58:54,990 | INFO     | overall cleanup function is called
[2026-01-10 06:59:27] 2026-01-10 05:58:55,050 | INFO     | PID=21744 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:59:27] 2026-01-10 05:58:55,050 | INFO     | .. there are 2 such processes running
[2026-01-10 06:59:27] 2026-01-10 05:58:55,999 | INFO     | --- collectZombieJob: --- 10, [8598]
[2026-01-10 06:59:27] 2026-01-10 05:58:55,999 | INFO     | zombie collector waiting for pid 8598
[2026-01-10 06:59:27] 2026-01-10 05:58:55,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:59:27] 2026-01-10 05:58:56,000 | INFO     | collected zombie processes
[2026-01-10 06:59:27] 2026-01-10 05:58:56,000 | INFO     | will attempt to kill all subprocesses of pid=8598
[2026-01-10 06:59:27] 2026-01-10 05:58:56,091 | INFO     | process IDs to be killed: [8598] (in reverse order)
[2026-01-10 06:59:27] 2026-01-10 05:58:56,121 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:59:27] 2026-01-10 05:58:56,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:59:27] 2026-01-10 05:58:56,124 | INFO     | did not find any defunct processes belonging to 8598
[2026-01-10 06:59:27] 2026-01-10 05:58:56,127 | INFO     | did not find any defunct processes belonging to 8598
[2026-01-10 06:59:27] 2026-01-10 05:58:56,127 | INFO     | ready for new job
[2026-01-10 06:59:27] 2026-01-10 05:58:56,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:59:27] 2026-01-10 05:58:56,128 | INFO     | ***************************************
[2026-01-10 06:59:27] 2026-01-10 05:58:56,128 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:59:27] 2026-01-10 05:58:56,128 | INFO     | ***************************************
[2026-01-10 06:59:27] 2026-01-10 05:58:56,128 | INFO     | 
[2026-01-10 06:59:27] 2026-01-10 05:58:56,142 | INFO     | architecture information:
[2026-01-10 06:59:27] 2026-01-10 05:58:56,143 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:59:27] 2026-01-10 05:58:56,148 | INFO     | cat /etc/os-release:
[2026-01-10 06:59:27] NAME="CentOS Linux"
[2026-01-10 06:59:27] VERSION="7 (Core)"
[2026-01-10 06:59:27] ID="centos"
[2026-01-10 06:59:27] ID_LIKE="rhel fedora"
[2026-01-10 06:59:27] VERSION_ID="7"
[2026-01-10 06:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:59:27] ANSI_COLOR="0;31"
[2026-01-10 06:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:59:27] HOME_URL="https://www.centos.org/"
[2026-01-10 06:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:59:27] 
[2026-01-10 06:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:59:27] 
[2026-01-10 06:59:27] 2026-01-10 05:58:56,149 | INFO     | ***************************************
[2026-01-10 06:59:27] 2026-01-10 05:58:56,651 | INFO     | executing command: df -mP /tmp/job_11011009/atlas/pilot/slots/0
[2026-01-10 06:59:27] 2026-01-10 05:58:56,657 | INFO     | sufficient remaining disk space (225633632256 B)
[2026-01-10 06:59:27] 2026-01-10 05:58:56,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:59:27] 2026-01-10 05:58:56,657 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:59:27] 2026-01-10 05:58:56,657 | INFO     | update_server=False
[2026-01-10 06:59:27] 2026-01-10 05:58:56,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:59:27] 2026-01-10 05:58:56,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:59:27] 2026-01-10 05:58:57,048 | INFO     | all job control threads have been joined
[2026-01-10 06:59:27] 2026-01-10 05:58:57,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:59:27] 2026-01-10 05:58:57,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:59:27] 2026-01-10 05:58:57,655 | INFO     | aborting loop
[2026-01-10 06:59:27] 2026-01-10 05:58:57,661 | INFO     | all data control threads have been joined
[2026-01-10 06:59:27] 2026-01-10 05:58:57,662 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:57,662 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:57,711 | INFO     | all payload control threads have been joined
[2026-01-10 06:59:27] 2026-01-10 05:58:57,727 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:57,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:59:27] 2026-01-10 05:58:57,860 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:57,918 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,053 | INFO     | [job] control thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,215 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,297 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,660 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,666 | INFO     | [data] control thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,716 | INFO     | [payload] control thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:58,737 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:59,031 | INFO     | [job] validate thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:59,090 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:58:59,157 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:59:01,856 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:59:27] 2026-01-10 05:59:12,444 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:59:27] 2026-01-10 05:59:13,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058717952)>']
[2026-01-10 06:59:27] 2026-01-10 05:59:18,545 | INFO     | all workflow threads have been joined
[2026-01-10 06:59:27] 2026-01-10 05:59:18,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:59:27] 2026-01-10 05:59:18,545 | INFO     | traces error code: 0
[2026-01-10 06:59:27] 2026-01-10 05:59:18,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:59:27] 2026-01-10 05:59:27,220 | INFO     | PID=21744 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 06:59:27] 2026-01-10 05:59:27,220 | INFO     | .. there are 2 such processes running
[2026-01-10 06:59:27] 2026-01-10 05:59:27,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:59:27] 2026-01-10 05:59:27,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:59:27] 2026-01-10 05:59:27,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:59:27] 2026-01-10 05:59:27,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:59:27] 2026-01-10 05:59:27,221 | INFO     | [monitor] control thread has ended
[2026-01-10 06:59:27] 2026-01-10 05:59:27,275 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:59:27] 2026-01-10 05:59:27,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:59:27] 2026-01-10 05:59:27,277 [wrapper] pilotpid: 21744
[2026-01-10 06:59:27] 2026-01-10 05:59:27,277 [wrapper] Pilot exit status: 0
[2026-01-10 06:59:27] 2026-01-10 05:59:27,281 [wrapper] pandaids: 6963197058
[2026-01-10 06:59:27] 2026-01-10 05:59:27,302 [wrapper] cleanup supervisor_pilot 23498 21745
[2026-01-10 06:59:27] 2026-01-10 05:59:27,303 [wrapper] Test setup, not cleaning
[2026-01-10 06:59:27] 2026-01-10 05:59:27,303 [wrapper] apfmon messages muted
[2026-01-10 06:59:27] 2026-01-10 05:59:27,304 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:59:27] 2026-01-10 05:59:27,305 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:59:27]  *** Error codes and diagnostics ***
[2026-01-10 06:59:27]     "exeErrorCode": 0,
[2026-01-10 06:59:27]     "exeErrorDiag": "",
[2026-01-10 06:59:27]     "pilotErrorCode": 0,
[2026-01-10 06:59:27]     "pilotErrorDiag": "",
[2026-01-10 06:59:27]  *** Listing of results directory ***
[2026-01-10 06:59:27] total 786648
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 06:59:27] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:13 runpilot2-wrapper.sh
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:13 queuedata.json
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user       100 Jan 10 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:59:27] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 02:56 run_atlas
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user       105 Jan 10 02:56 job.xml
[2026-01-10 06:59:27] -rw-r--r-- 2 mf493845 unix-user 392826066 Jan 10 04:36 EVNT.47962006._000063.pool.root.1
[2026-01-10 06:59:27] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:36 start_atlas.sh
[2026-01-10 06:59:27] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 04:36 shared
[2026-01-10 06:59:27] -rw-r--r-- 2 mf493845 unix-user    592598 Jan 10 04:36 input.tar.gz
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      6391 Jan 10 04:36 init_data.xml
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user         0 Jan 10 04:36 boinc_setup_complete
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      8192 Jan 10 04:36 boinc_mmap_file
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user         0 Jan 10 04:36 boinc_lockfile
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      2891 Jan 10 04:36 pandaJob.out
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user    989374 Jan 10 04:36 agis_schedconf.cvmfs.json
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user   1516240 Jan 10 04:36 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:59:27] drwx------ 5 mf493845 unix-user       440 Jan 10 04:36 pilot3
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user 403651745 Jan 10 06:58 HITS.47962010._000731.pool.root.1
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      1022 Jan 10 06:58 memory_monitor_summary.json
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user        95 Jan 10 06:58 pilot_heartbeat.json
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user   1328106 Jan 10 06:58 log.47962010._000731.job.log.tgz.1
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      8573 Jan 10 06:58 heartbeat.json
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user       820 Jan 10 06:59 pilotlog.txt
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user   1256815 Jan 10 06:59 log.47962010._000731.job.log.1
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user       353 Jan 10 06:59 output.list
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user       620 Jan 10 06:59 runtime_log
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user   2600960 Jan 10 06:59 result.tar.gz
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user      9220 Jan 10 06:59 runtime_log.err
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user       646 Jan 10 06:59 AulNDm3rLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4EhKDm1JWhnn.diag
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user     21662 Jan 10 06:59 stderr.txt
[2026-01-10 06:59:27] HITS file was successfully produced:
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user 403651745 Jan 10 06:58 shared/HITS.pool.root.1
[2026-01-10 06:59:27]  *** Contents of shared directory: ***
[2026-01-10 06:59:27] total 780948
[2026-01-10 06:59:27] -rw-r--r-- 2 mf493845 unix-user 392826066 Jan 10 04:36 ATLAS.root_0
[2026-01-10 06:59:27] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:36 start_atlas.sh
[2026-01-10 06:59:27] -rw-r--r-- 2 mf493845 unix-user    592598 Jan 10 04:36 input.tar.gz
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user 403651745 Jan 10 06:58 HITS.pool.root.1
[2026-01-10 06:59:27] -rw------- 1 mf493845 unix-user   2600960 Jan 10 06:59 result.tar.gz
06:59:29 (15684): run_atlas exited; CPU time 64582.797127
06:59:29 (15684): called boinc_finish(0)

</stderr_txt>
]]>

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