Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:11:27 (448991): wrapper (7.7.26015): starting
20:11:27 (448991): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 20:11:27] Arguments: --nthreads 9
[2026-01-09 20:11:27] Threads: 9
[2026-01-09 20:11:27] Checking for CVMFS
[2026-01-09 20:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:11:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:11:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:11:30] 2.13.3.0 10787 23355 418352 154962 0 330 31420745 32935936 53010 16776704 0 244644596 99.800 111085524 27541 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:11:30] CVMFS is ok
[2026-01-09 20:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:11:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:11:30] Further information can be found at the LHC@home message board.
[2026-01-09 20:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:11:30] Checking for apptainer binary...
[2026-01-09 20:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:11:30] Running /usr/bin/apptainer --version
[2026-01-09 20:11:30] apptainer version 1.4.5-2.el9
[2026-01-09 20:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:11:31] lc-10-11.aglt2.org
[2026-01-09 20:11:31] apptainer works
[2026-01-09 20:11:31] Set ATHENA_PROC_NUMBER=9
[2026-01-09 20:11:31] Set ATHENA_CORE_NUMBER=9
[2026-01-09 20:11:31] Starting ATLAS job with PandaID=6962316508
[2026-01-09 20:11:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:31:22]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:31:22] 2026-01-10 05:30:33,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:31:22] 2026-01-10 05:30:34,454 | INFO     | time since job start (15467s) is within the limit (174528.0s)
[2026-01-10 00:31:22] 2026-01-10 05:30:35,631 | INFO     | monitor loop #844: job 0:6962316508 is in state 'finished'
[2026-01-10 00:31:22] 2026-01-10 05:30:35,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:31:22] 2026-01-10 05:30:36,460 | INFO     | time since job start (15469s) is within the limit (174528.0s)
[2026-01-10 00:31:22] 2026-01-10 05:30:38,147 | INFO     | monitor loop #845: job 0:6962316508 is in state 'finished'
[2026-01-10 00:31:22] 2026-01-10 05:30:38,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:31:22] 2026-01-10 05:30:38,466 | INFO     | time since job start (15471s) is within the limit (174528.0s)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,075 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 00:31:22] 2026-01-10 05:30:39,081 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2879.5339062499993
[2026-01-10 00:31:22] 2026-01-10 05:30:39,106 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6962316508/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,107 | INFO     | extracted standard info from prmon json
[2026-01-10 00:31:22] 2026-01-10 05:30:39,107 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:31:22] 2026-01-10 05:30:39,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:31:22] 2026-01-10 05:30:39,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:31:22] 2026-01-10 05:30:39,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:31:22] 2026-01-10 05:30:39,112 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:31:22] 2026-01-10 05:30:39,112 | INFO     | sum of square deviations: 4903284463.545832
[2026-01-10 00:31:22] 2026-01-10 05:30:39,114 | INFO     | sum of deviations: 19328276363.131493
[2026-01-10 00:31:22] 2026-01-10 05:30:39,114 | INFO     | mean x: 1768015333.1474104
[2026-01-10 00:31:22] 2026-01-10 05:30:39,114 | INFO     | mean y: 2598063.509960159
[2026-01-10 00:31:22] 2026-01-10 05:30:39,114 | INFO     | intersect: -6966748550.456429
[2026-01-10 00:31:22] 2026-01-10 05:30:39,115 | INFO     | chi2: 2.6379195862355136
[2026-01-10 00:31:22] 2026-01-10 05:30:39,115 | INFO     | sum of square deviations: 4616047266.231727
[2026-01-10 00:31:22] 2026-01-10 05:30:39,117 | INFO     | sum of deviations: 18873006196.62195
[2026-01-10 00:31:22] 2026-01-10 05:30:39,117 | INFO     | mean x: 1768015180.6463416
[2026-01-10 00:31:22] 2026-01-10 05:30:39,117 | INFO     | mean y: 2597822.1910569104
[2026-01-10 00:31:22] 2026-01-10 05:30:39,117 | INFO     | intersect: -7226045979.6518955
[2026-01-10 00:31:22] 2026-01-10 05:30:39,118 | INFO     | chi2: 2.6389866357349008
[2026-01-10 00:31:22] 2026-01-10 05:30:39,118 | INFO     | current chi2=2.6389866357349008 (change=-0.04045041800951694 %)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,118 | INFO     | right removable region: 245
[2026-01-10 00:31:22] 2026-01-10 05:30:39,118 | INFO     | sum of square deviations: 4616039885.93499
[2026-01-10 00:31:22] 2026-01-10 05:30:39,120 | INFO     | sum of deviations: -38742485740.5366
[2026-01-10 00:31:22] 2026-01-10 05:30:39,120 | INFO     | mean x: 1768015485.6504066
[2026-01-10 00:31:22] 2026-01-10 05:30:39,120 | INFO     | mean y: 2628731.8658536584
[2026-01-10 00:31:22] 2026-01-10 05:30:39,120 | INFO     | intersect: 14841606824.444548
[2026-01-10 00:31:22] 2026-01-10 05:30:39,121 | INFO     | chi2: 0.4067794082391407
[2026-01-10 00:31:22] 2026-01-10 05:30:39,121 | INFO     | current chi2=0.4067794082391407 (change=84.57953720948554 %)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,121 | INFO     | sum of square deviations: 4340252510.622393
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | sum of deviations: -49252108054.6141
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | mean x: 1768015638.1493776
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | mean y: 2634515.5726141077
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | intersect: 20065637080.34587
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | chi2: 0.30540070515700307
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | current chi2=0.30540070515700307 (change=24.92227999469883 %)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,123 | INFO     | left removable region: 20
[2026-01-10 00:31:22] 2026-01-10 05:30:39,124 | INFO     | sum of square deviations: 3531893562.8622255
[2026-01-10 00:31:22] 2026-01-10 05:30:39,125 | INFO     | sum of deviations: -52379084225.77334
[2026-01-10 00:31:22] 2026-01-10 05:30:39,125 | INFO     | mean x: 1768015760.1511111
[2026-01-10 00:31:22] 2026-01-10 05:30:39,126 | INFO     | mean y: 2637642.493333333
[2026-01-10 00:31:22] 2026-01-10 05:30:39,126 | INFO     | intersect: 26222863355.751102
[2026-01-10 00:31:22] 2026-01-10 05:30:39,126 | INFO     | chi2: 0.24252487327091657
[2026-01-10 00:31:22] 2026-01-10 05:30:39,126 | INFO     | current memory leak: -14.83 B/s (using 225 data points, chi2=0.24)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | could have reported an average CPU frequency of 2848 MHz (12 samples)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | ..............................
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . Timing measurements:
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . get job = 0 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . initial setup = 7 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . payload setup = 42 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . stage-in = 0 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . payload execution = 15339 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . stage-out = 2 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | . log creation = 0 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,127 | INFO     | ..............................
[2026-01-10 00:31:22] 2026-01-10 05:30:39,277 | INFO     | 
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | job summary report
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | --------------------------------------------------
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | PanDA job id: 6962316508
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | task id: 47898826
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | errors: (none)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | pilot state: finished 
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | transexitcode: 0
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | exeerrorcode: 0
[2026-01-10 00:31:22] 2026-01-10 05:30:39,278 | INFO     | exeerrordiag: 
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | exitcode: 0
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | exitmsg: OK
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | cpuconsumptiontime: 57495 s
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | nevents: 400
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | neventsw: 0
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | pid: 493549
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | pgrp: 493549
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | corecount: 9
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | event service: False
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2283853, 3: 2284024, 4: 2284052, 15: 2284080, 26: 2284236, 36: 2284554, 15385: 2315472, 15386: 2315471, 15388: 2324525, 15389: 2
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | --------------------------------------------------
[2026-01-10 00:31:22] 2026-01-10 05:30:39,279 | INFO     | 
[2026-01-10 00:31:22] 2026-01-10 05:30:39,280 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 00:31:22] 2026-01-10 05:30:39,316 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,316 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,316 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,316 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,318 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:31:22] 2026-01-10 05:30:39,319 | INFO     | job 6962316508 has completed (purged errors)
[2026-01-10 00:31:22] 2026-01-10 05:30:39,319 | INFO     | overall cleanup function is called
[2026-01-10 00:31:22] 2026-01-10 05:30:40,329 | INFO     | --- collectZombieJob: --- 10, [493549]
[2026-01-10 00:31:22] 2026-01-10 05:30:40,330 | INFO     | zombie collector waiting for pid 493549
[2026-01-10 00:31:22] 2026-01-10 05:30:40,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:31:22] 2026-01-10 05:30:40,330 | INFO     | collected zombie processes
[2026-01-10 00:31:22] 2026-01-10 05:30:40,330 | INFO     | will attempt to kill all subprocesses of pid=493549
[2026-01-10 00:31:22] 2026-01-10 05:30:41,101 | INFO     | process IDs to be killed: [493549] (in reverse order)
[2026-01-10 00:31:22] 2026-01-10 05:30:41,365 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:31:22] 2026-01-10 05:30:41,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:31:22] 2026-01-10 05:30:41,394 | INFO     | did not find any defunct processes belonging to 493549
[2026-01-10 00:31:22] 2026-01-10 05:30:41,433 | INFO     | did not find any defunct processes belonging to 493549
[2026-01-10 00:31:22] 2026-01-10 05:30:41,433 | INFO     | ready for new job
[2026-01-10 00:31:22] 2026-01-10 05:30:41,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:31:22] 2026-01-10 05:30:41,440 | INFO     | ***************************************
[2026-01-10 00:31:22] 2026-01-10 05:30:41,440 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:31:22] 2026-01-10 05:30:41,440 | INFO     | ***************************************
[2026-01-10 00:31:22] 2026-01-10 05:30:41,440 | INFO     | 
[2026-01-10 00:31:22] 2026-01-10 05:30:41,447 | INFO     | architecture information:
[2026-01-10 00:31:22] 2026-01-10 05:30:41,449 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:31:22] 2026-01-10 05:30:41,477 | INFO     | cat /etc/os-release:
[2026-01-10 00:31:22] NAME="CentOS Linux"
[2026-01-10 00:31:22] VERSION="7 (Core)"
[2026-01-10 00:31:22] ID="centos"
[2026-01-10 00:31:22] ID_LIKE="rhel fedora"
[2026-01-10 00:31:22] VERSION_ID="7"
[2026-01-10 00:31:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:31:22] ANSI_COLOR="0;31"
[2026-01-10 00:31:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:31:22] HOME_URL="https://www.centos.org/"
[2026-01-10 00:31:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:31:22] 
[2026-01-10 00:31:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:31:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:31:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:31:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:31:22] 
[2026-01-10 00:31:22] 2026-01-10 05:30:41,477 | INFO     | ***************************************
[2026-01-10 00:31:22] 2026-01-10 05:30:41,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 00:31:22] 2026-01-10 05:30:42,054 | INFO     | sufficient remaining disk space (96542392320 B)
[2026-01-10 00:31:22] 2026-01-10 05:30:42,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:31:22] 2026-01-10 05:30:42,058 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:31:22] 2026-01-10 05:30:42,058 | INFO     | update_server=False
[2026-01-10 00:31:22] 2026-01-10 05:30:42,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:31:22] 2026-01-10 05:30:42,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:31:22] 2026-01-10 05:30:42,061 | INFO     | aborting loop
[2026-01-10 00:31:22] 2026-01-10 05:30:42,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:31:22] 2026-01-10 05:30:42,068 | INFO     | all payload control threads have been joined
[2026-01-10 00:31:22] 2026-01-10 05:30:42,127 | INFO     | all job control threads have been joined
[2026-01-10 00:31:22] 2026-01-10 05:30:42,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:31:22] 2026-01-10 05:30:43,001 | INFO     | all data control threads have been joined
[2026-01-10 00:31:22] 2026-01-10 05:30:43,064 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,067 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,071 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,077 | INFO     | [payload] control thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,133 | INFO     | [job] control thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,269 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,880 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,897 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,927 | INFO     | [job] validate thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:43,972 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:44,006 | INFO     | [data] control thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:44,081 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:44,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:31:22] 2026-01-10 05:30:44,458 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:45,280 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:46,076 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:30:52,595 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:31:22] 2026-01-10 05:30:53,601 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:31:22] 2026-01-10 05:31:12,783 | INFO     | PID=465420 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 00:31:22] 2026-01-10 05:31:12,783 | INFO     | .. there are 78 such processes running
[2026-01-10 00:31:22] 2026-01-10 05:31:12,784 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:31:22] 2026-01-10 05:31:12,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:31:22] 2026-01-10 05:31:12,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:31:22] 2026-01-10 05:31:14,559 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:31:22] 2026-01-10 05:31:15,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140042680690496)>', '<ExcThread(monitor, started 140042215343872)>']
[2026-01-10 00:31:22] 2026-01-10 05:31:15,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:31:22] 2026-01-10 05:31:15,803 | INFO     | [monitor] control thread has ended
[2026-01-10 00:31:22] 2026-01-10 05:31:20,458 | INFO     | all workflow threads have been joined
[2026-01-10 00:31:22] 2026-01-10 05:31:20,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:31:22] 2026-01-10 05:31:20,459 | INFO     | traces error code: 0
[2026-01-10 00:31:22] 2026-01-10 05:31:20,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:31:22] 2026-01-10 05:31:20,844 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:31:22] 2026-01-10 05:31:20,868 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:31:22] 2026-01-10 05:31:20,911 [wrapper] pilotpid: 465420
[2026-01-10 00:31:22] 2026-01-10 05:31:20,946 [wrapper] Pilot exit status: 0
[2026-01-10 00:31:22] 2026-01-10 05:31:21,111 [wrapper] pandaids: 6962316508
[2026-01-10 00:31:22] 2026-01-10 05:31:21,467 [wrapper] cleanup supervisor_pilot 3102531 465421
[2026-01-10 00:31:22] 2026-01-10 05:31:21,492 [wrapper] Test setup, not cleaning
[2026-01-10 00:31:22] 2026-01-10 05:31:21,509 [wrapper] apfmon messages muted
[2026-01-10 00:31:22] 2026-01-10 05:31:21,535 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:31:22] 2026-01-10 05:31:21,561 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:31:22]  *** Error codes and diagnostics ***
[2026-01-10 00:31:22]     "exeErrorCode": 0,
[2026-01-10 00:31:22]     "exeErrorDiag": "",
[2026-01-10 00:31:22]     "pilotErrorCode": 0,
[2026-01-10 00:31:22]     "pilotErrorDiag": "",
[2026-01-10 00:31:22]  *** Listing of results directory ***
[2026-01-10 00:31:22] total 435492
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-10 00:31:22] -rwx------. 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:56 queuedata.json
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:31:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:11 run_atlas
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:11 job.xml
[2026-01-10 00:31:22] -rw-r--r--. 2 boincer umatlas 224597154 Jan  9 20:11 EVNT.47898824._000518.pool.root.1
[2026-01-10 00:31:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:11 start_atlas.sh
[2026-01-10 00:31:22] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:11 shared
[2026-01-10 00:31:22] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 20:11 input.tar.gz
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:11 boinc_lockfile
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 20:11 pandaJob.out
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas        57 Jan  9 20:11 setup.sh.local
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas    989374 Jan  9 20:12 agis_schedconf.cvmfs.json
[2026-01-10 00:31:22] drwx------. 5 boincer umatlas      4096 Jan  9 20:12 pilot3
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas 212832662 Jan 10 00:29 HITS.47898826._012356.pool.root.1
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas       531 Jan 10 00:29 boinc_task_state.xml
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas      6866 Jan 10 00:29 init_data.xml
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas        95 Jan 10 00:30 pilot_heartbeat.json
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas      1047 Jan 10 00:30 memory_monitor_summary.json
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas    477372 Jan 10 00:30 log.47898826._012356.job.log.tgz.1
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas      7833 Jan 10 00:30 heartbeat.json
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:31 wrapper_checkpoint.txt
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas      4895 Jan 10 00:31 pilotlog.txt
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas   1822200 Jan 10 00:31 log.47898826._012356.job.log.1
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:31 boinc_mmap_file
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas       357 Jan 10 00:31 output.list
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:31 runtime_log
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas   2314240 Jan 10 00:31 result.tar.gz
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 00:31 runtime_log.err
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas       657 Jan 10 00:31 Jz4MDmwkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsadKDm1ei4hm.diag
[2026-01-10 00:31:22] -rw-r--r--. 1 boincer umatlas     21427 Jan 10 00:31 stderr.txt
[2026-01-10 00:31:22] HITS file was successfully produced:
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas 212832662 Jan 10 00:29 shared/HITS.pool.root.1
[2026-01-10 00:31:22]  *** Contents of shared directory: ***
[2026-01-10 00:31:22] total 430048
[2026-01-10 00:31:22] -rw-r--r--. 2 boincer umatlas 224597154 Jan  9 20:11 ATLAS.root_0
[2026-01-10 00:31:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:11 start_atlas.sh
[2026-01-10 00:31:22] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 20:11 input.tar.gz
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas 212832662 Jan 10 00:29 HITS.pool.root.1
[2026-01-10 00:31:22] -rw-------. 1 boincer umatlas   2314240 Jan 10 00:31 result.tar.gz
00:31:43 (448991): run_atlas exited; CPU time 58404.907264
00:31:43 (448991): called boinc_finish(0)

</stderr_txt>
]]>

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