Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:22:07 (4029386): wrapper (7.7.26015): starting
19:22:07 (4029386): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:22:07] Arguments: --nthreads 8
[2026-01-09 19:22:07] Threads: 8
[2026-01-09 19:22:07] Checking for CVMFS
[2026-01-09 19:22:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:22:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:22:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:22:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:22:09] 2.13.3.0 9597 23372 129768 154962 0 201 26112644 40960000 25954 16776704 0 111218020 99.656 98017441 46970 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:22:09] CVMFS is ok
[2026-01-09 19:22:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:22:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:22:09] Further information can be found at the LHC@home message board.
[2026-01-09 19:22:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:22:09] Checking for apptainer binary...
[2026-01-09 19:22:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:22:09] Running /usr/bin/apptainer --version
[2026-01-09 19:22:09] apptainer version 1.4.5-2.el9
[2026-01-09 19:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:22:10] c-208-38.aglt2.org
[2026-01-09 19:22:10] apptainer works
[2026-01-09 19:22:10] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:22:10] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:22:10] Starting ATLAS job with PandaID=6963165517
[2026-01-09 19:22:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:47:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:47:58] 2026-01-10 02:47:20,869 | INFO     | sum of square deviations: 832717108.6474824
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | sum of deviations: 38414774247.107925
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | mean x: 1768008951.0503597
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | mean y: 2470098.841726619
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | intersect: -81559039825.91417
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | chi2: 4.3618789890575655
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | sum of square deviations: 746047851.1343291
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | sum of deviations: 37308643936.403
[2026-01-09 21:47:58] 2026-01-10 02:47:20,870 | INFO     | mean x: 1768008798.5522387
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | mean y: 2468153.656716418
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | intersect: -88412786499.67569
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | chi2: 4.373779776661614
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | current chi2=4.373779776661614 (change=-0.27283626239754416 %)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | right removable region: 133
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | sum of square deviations: 746043581.1343291
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | sum of deviations: -5726589810.447759
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | mean x: 1768009103.5522387
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | mean y: 2547572.9925373136
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | intersect: 13573688955.627296
[2026-01-09 21:47:58] 2026-01-10 02:47:20,871 | INFO     | chi2: 0.2940282243982757
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | current chi2=0.2940282243982757 (change=93.25913843240745 %)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | sum of square deviations: 665602728.6201546
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | sum of deviations: -14555460164.162792
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | mean x: 1768009256.0542636
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | mean y: 2564122.023255814
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | intersect: 38665549097.637566
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | chi2: 0.05523737445096852
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | current chi2=0.05523737445096852 (change=81.21358091931108 %)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,872 | INFO     | sum of square deviations: 591169978.709679
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | sum of deviations: -14780760351.09678
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | mean x: 1768009408.548387
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | mean y: 2564496.7661290322
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | intersect: 44207318302.56052
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | chi2: 0.03689874924504941
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | current chi2=0.03689874924504941 (change=33.19966850016993 %)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,877 | INFO     | sum of square deviations: 522497093.6974782
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | sum of deviations: -13043497867.54622
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | mean x: 1768009561.0504203
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | mean y: 2560629.9243697478
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | intersect: 44138746682.50105
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | chi2: 0.03683036968898825
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | current chi2=0.03683036968898825 (change=0.18531673148876995 %)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | left removable region: 40
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | sum of square deviations: 249389965.82795686
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | sum of deviations: -4740342068.763442
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | mean x: 1768009988.0430107
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | mean y: 2539387.440860215
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | intersect: 33608430853.402634
[2026-01-09 21:47:58] 2026-01-10 02:47:20,878 | INFO     | chi2: 0.028086843297139067
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | current memory leak: -19.01 B/s (using 93 data points, chi2=0.03)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | ..............................
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . Timing measurements:
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . get job = 0 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . initial setup = 6 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . payload setup = 42 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . stage-in = 0 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . payload execution = 8494 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . stage-out = 1 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | . log creation = 0 s
[2026-01-09 21:47:58] 2026-01-10 02:47:20,879 | INFO     | ..............................
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | 
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | job summary report
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | --------------------------------------------------
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | PanDA job id: 6963165517
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | task id: 47898826
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | errors: (none)
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | pilot state: finished 
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | transexitcode: 0
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | exeerrorcode: 0
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | exeerrordiag: 
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | exitcode: 0
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | exitmsg: OK
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | cpuconsumptiontime: 30815 s
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | nevents: 400
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | neventsw: 0
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | pid: 4066590
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | pgrp: 4066590
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | corecount: 8
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | event service: False
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 32: 2284317, 34: 2284345, 8541: 2312427, 8544: 2321481, 8571: 2321619}
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | --------------------------------------------------
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | 
[2026-01-09 21:47:58] 2026-01-10 02:47:21,054 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,120 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:47:58] 2026-01-10 02:47:21,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,120 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:47:58] 2026-01-10 02:47:21,120 | INFO     | job 6963165517 has completed (purged errors)
[2026-01-09 21:47:58] 2026-01-10 02:47:21,120 | INFO     | overall cleanup function is called
[2026-01-09 21:47:58] 2026-01-10 02:47:22,142 | INFO     | --- collectZombieJob: --- 10, [4066590]
[2026-01-09 21:47:58] 2026-01-10 02:47:22,143 | INFO     | zombie collector waiting for pid 4066590
[2026-01-09 21:47:58] 2026-01-10 02:47:22,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:47:58] 2026-01-10 02:47:22,143 | INFO     | collected zombie processes
[2026-01-09 21:47:58] 2026-01-10 02:47:22,143 | INFO     | will attempt to kill all subprocesses of pid=4066590
[2026-01-09 21:47:58] 2026-01-10 02:47:23,798 | INFO     | PID=4044340 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:47:58] 2026-01-10 02:47:23,798 | INFO     | .. there are 24 such processes running
[2026-01-09 21:47:58] 2026-01-10 02:47:23,841 | INFO     | process IDs to be killed: [4066590] (in reverse order)
[2026-01-09 21:47:58] 2026-01-10 02:47:24,263 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:47:58] 2026-01-10 02:47:24,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:47:58] 2026-01-10 02:47:24,305 | INFO     | did not find any defunct processes belonging to 4066590
[2026-01-09 21:47:58] 2026-01-10 02:47:24,327 | INFO     | did not find any defunct processes belonging to 4066590
[2026-01-09 21:47:58] 2026-01-10 02:47:24,327 | INFO     | ready for new job
[2026-01-09 21:47:58] 2026-01-10 02:47:24,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:47:58] 2026-01-10 02:47:24,328 | INFO     | ***************************************
[2026-01-09 21:47:58] 2026-01-10 02:47:24,328 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:47:58] 2026-01-10 02:47:24,328 | INFO     | ***************************************
[2026-01-09 21:47:58] 2026-01-10 02:47:24,329 | INFO     | 
[2026-01-09 21:47:58] 2026-01-10 02:47:24,333 | INFO     | architecture information:
[2026-01-09 21:47:58] 2026-01-10 02:47:24,333 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:47:58] 2026-01-10 02:47:24,374 | INFO     | cat /etc/os-release:
[2026-01-09 21:47:58] NAME="CentOS Linux"
[2026-01-09 21:47:58] VERSION="7 (Core)"
[2026-01-09 21:47:58] ID="centos"
[2026-01-09 21:47:58] ID_LIKE="rhel fedora"
[2026-01-09 21:47:58] VERSION_ID="7"
[2026-01-09 21:47:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:47:58] ANSI_COLOR="0;31"
[2026-01-09 21:47:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:47:58] HOME_URL="https://www.centos.org/"
[2026-01-09 21:47:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:47:58] 
[2026-01-09 21:47:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:47:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:47:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:47:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:47:58] 
[2026-01-09 21:47:58] 2026-01-10 02:47:24,374 | INFO     | ***************************************
[2026-01-09 21:47:58] 2026-01-10 02:47:24,878 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 21:47:58] 2026-01-10 02:47:24,941 | INFO     | sufficient remaining disk space (169413181440 B)
[2026-01-09 21:47:58] 2026-01-10 02:47:24,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:47:58] 2026-01-10 02:47:24,941 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:47:58] 2026-01-10 02:47:24,941 | INFO     | update_server=False
[2026-01-09 21:47:58] 2026-01-10 02:47:24,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:47:58] 2026-01-10 02:47:25,258 | INFO     | all job control threads have been joined
[2026-01-09 21:47:58] 2026-01-10 02:47:25,395 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 21:47:58] 2026-01-10 02:47:25,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 21:47:58] 2026-01-10 02:47:25,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:47:58] 2026-01-10 02:47:25,396 | INFO     | will abort loop
[2026-01-09 21:47:58] 2026-01-10 02:47:25,428 | INFO     | all payload control threads have been joined
[2026-01-09 21:47:58] 2026-01-10 02:47:25,948 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:47:58] 2026-01-10 02:47:26,046 | INFO     | all data control threads have been joined
[2026-01-09 21:47:58] 2026-01-10 02:47:26,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,152 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:47:58] 2026-01-10 02:47:26,264 | INFO     | [job] control thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:47:58] 2026-01-10 02:47:26,402 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,406 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,439 | INFO     | [payload] control thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,560 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:26,651 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:27,017 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:27,052 | INFO     | [data] control thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:27,058 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:27,107 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:27,414 | INFO     | [job] validate thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:28,240 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:30,357 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:47:58] 2026-01-10 02:47:38,531 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:47:58] 2026-01-10 02:47:39,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869054785344)>', '<ExcThread(monitor, started 139868680214272)>']
[2026-01-09 21:47:58] 2026-01-10 02:47:44,451 | INFO     | all workflow threads have been joined
[2026-01-09 21:47:58] 2026-01-10 02:47:44,451 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:47:58] 2026-01-10 02:47:44,451 | INFO     | traces error code: 0
[2026-01-09 21:47:58] 2026-01-10 02:47:44,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:47:58] 2026-01-10 02:47:56,977 | INFO     | PID=4044340 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:47:58] 2026-01-10 02:47:56,985 | INFO     | .. there are 24 such processes running
[2026-01-09 21:47:58] 2026-01-10 02:47:56,985 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:47:58] 2026-01-10 02:47:56,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:47:58] 2026-01-10 02:47:56,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:47:58] 2026-01-10 02:47:56,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:47:58] 2026-01-10 02:47:56,986 | INFO     | [monitor] control thread has ended
[2026-01-09 21:47:58] 2026-01-10 02:47:57,400 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:47:58] 2026-01-10 02:47:57,442 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:47:58] 2026-01-10 02:47:57,485 [wrapper] pilotpid: 4044340
[2026-01-09 21:47:58] 2026-01-10 02:47:57,518 [wrapper] Pilot exit status: 0
[2026-01-09 21:47:58] 2026-01-10 02:47:57,691 [wrapper] pandaids: 6963165517
[2026-01-09 21:47:58] 2026-01-10 02:47:57,833 [wrapper] cleanup supervisor_pilot  495243 4044341
[2026-01-09 21:47:58] 2026-01-10 02:47:57,857 [wrapper] Test setup, not cleaning
[2026-01-09 21:47:58] 2026-01-10 02:47:57,904 [wrapper] apfmon messages muted
[2026-01-09 21:47:58] 2026-01-10 02:47:57,930 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:47:58] 2026-01-10 02:47:57,973 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:47:58]  *** Error codes and diagnostics ***
[2026-01-09 21:47:58]     "exeErrorCode": 0,
[2026-01-09 21:47:58]     "exeErrorDiag": "",
[2026-01-09 21:47:58]     "pilotErrorCode": 0,
[2026-01-09 21:47:58]     "pilotErrorDiag": "",
[2026-01-09 21:47:58]  *** Listing of results directory ***
[2026-01-09 21:47:58] total 442236
[2026-01-09 21:47:58] -rwx------. 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:56 queuedata.json
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:47:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:22 run_atlas
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:22 job.xml
[2026-01-09 21:47:58] -rw-r--r--. 2 boincer umatlas 226415973 Jan  9 19:22 EVNT.47898824._001345.pool.root.1
[2026-01-09 21:47:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:22 start_atlas.sh
[2026-01-09 21:47:58] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:22 shared
[2026-01-09 21:47:58] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 19:22 input.tar.gz
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:22 boinc_lockfile
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 19:22 pandaJob.out
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas        57 Jan  9 19:22 setup.sh.local
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas    989374 Jan  9 19:23 agis_schedconf.cvmfs.json
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:47:58] drwx------. 5 boincer umatlas      4096 Jan  9 19:23 pilot3
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas 219492055 Jan  9 21:46 HITS.47898826._034736.pool.root.1
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:46 boinc_task_state.xml
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas      7184 Jan  9 21:46 init_data.xml
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas      1044 Jan  9 21:46 memory_monitor_summary.json
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas    379909 Jan  9 21:46 log.47898826._034736.job.log.tgz.1
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas      7802 Jan  9 21:47 heartbeat.json
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:47 boinc_mmap_file
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:47 wrapper_checkpoint.txt
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas        95 Jan  9 21:47 pilot_heartbeat.json
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas       823 Jan  9 21:47 pilotlog.txt
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas   1134673 Jan  9 21:47 log.47898826._034736.job.log.1
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas       357 Jan  9 21:47 output.list
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:47 runtime_log
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas   1536000 Jan  9 21:47 result.tar.gz
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 21:47 runtime_log.err
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas       656 Jan  9 21:47 6PTNDm2yFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTVgKDmdIuRAo.diag
[2026-01-09 21:47:58] -rw-r--r--. 1 boincer umatlas     21184 Jan  9 21:47 stderr.txt
[2026-01-09 21:47:58] HITS file was successfully produced:
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas 219492055 Jan  9 21:46 shared/HITS.pool.root.1
[2026-01-09 21:47:58]  *** Contents of shared directory: ***
[2026-01-09 21:47:58] total 437560
[2026-01-09 21:47:58] -rw-r--r--. 2 boincer umatlas 226415973 Jan  9 19:22 ATLAS.root_0
[2026-01-09 21:47:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:22 start_atlas.sh
[2026-01-09 21:47:58] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 19:22 input.tar.gz
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas 219492055 Jan  9 21:46 HITS.pool.root.1
[2026-01-09 21:47:58] -rw-------. 1 boincer umatlas   1536000 Jan  9 21:47 result.tar.gz
21:48:00 (4029386): run_atlas exited; CPU time 31088.920501
21:48:00 (4029386): called boinc_finish(0)

</stderr_txt>
]]>

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