Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:44 (1370017): wrapper (7.7.26015): starting
20:18:44 (1370017): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 20:18:44] Arguments: --nthreads 4
[2026-01-10 20:18:44] Threads: 4
[2026-01-10 20:18:44] Checking for CVMFS
[2026-01-10 20:18:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 20:18:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 20:18:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 20:18:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 20:18:45] 2.9.2.0 10828 4539 95848 154990 2 56 22947124 36864000 0 130560 0 3327492 99.989 169048 4026 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 20:18:45] CVMFS is ok
[2026-01-10 20:18:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 20:18:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 20:18:45] Further information can be found at the LHC@home message board.
[2026-01-10 20:18:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 20:18:45] Checking for apptainer binary...
[2026-01-10 20:18:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 20:18:45] Running /usr/bin/apptainer --version
[2026-01-10 20:18:45] apptainer version 1.4.1-1.1
[2026-01-10 20:18:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 20:18:45] thA350
[2026-01-10 20:18:45] apptainer works
[2026-01-10 20:18:45] Set ATHENA_PROC_NUMBER=4
[2026-01-10 20:18:45] Set ATHENA_CORE_NUMBER=4
[2026-01-10 20:18:45] Starting ATLAS job with PandaID=6961933616
[2026-01-10 20:18:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:47:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:47:02]  storage_token=
[2026-01-10 21:47:02]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6961933616/log.47898826._007222.job.log.tgz.1
[2026-01-10 21:47:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/18/log.47898826._007222.job.log.tgz.1
[2026-01-10 21:47:02]  workdir=None
[2026-01-10 21:47:02] ]
[2026-01-10 21:47:02] 2026-01-10 20:45:58,128 | INFO     | transferring file log.47898826._007222.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6961933616/log.47898826._007222.job.log.tgz.1 to /local/data/boinc/
[2026-01-10 21:47:02] 2026-01-10 20:45:58,128 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6961933616/log.47898826._007222.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0072
[2026-01-10 21:47:02] 2026-01-10 20:45:58,142 | INFO     | adding to output.list: log.47898826._007222.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/18/log.47898826._007222.job.log.tg
[2026-01-10 21:47:02] 2026-01-10 20:45:58,142 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 21:47:02] 2026-01-10 20:45:58,142 | INFO     | summary of transferred files:
[2026-01-10 21:47:02] 2026-01-10 20:45:58,142 | INFO     |  -- lfn=log.47898826._007222.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 21:47:02] 2026-01-10 20:45:58,142 | INFO     | stage-out finished correctly
[2026-01-10 21:47:02] 2026-01-10 20:45:58,256 | INFO     | monitor loop #402: job 0:6961933616 is in state 'finished'
[2026-01-10 21:47:02] 2026-01-10 20:45:58,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:47:02] 2026-01-10 20:45:58,854 | INFO     | time since job start (5227s) is within the limit (174528.0s)
[2026-01-10 21:47:02] 2026-01-10 20:46:00,760 | INFO     | monitor loop #403: job 0:6961933616 is in state 'finished'
[2026-01-10 21:47:02] 2026-01-10 20:46:00,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:47:02] 2026-01-10 20:46:00,861 | INFO     | time since job start (5229s) is within the limit (174528.0s)
[2026-01-10 21:47:02] 2026-01-10 20:46:01,195 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 21:47:02] 2026-01-10 20:46:02,867 | INFO     | time since job start (5231s) is within the limit (174528.0s)
[2026-01-10 21:47:02] 2026-01-10 20:46:03,264 | INFO     | monitor loop #404: job 0:6961933616 is in state 'finished'
[2026-01-10 21:47:02] 2026-01-10 20:46:03,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | job 6961933616 has state=finished
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | preparing for final server update for job 6961933616 in state='finished'
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | this job has now completed (state=finished)
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | log transfer has been attempted: DONE
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | job 6961933616 has finished - writing final server update
[2026-01-10 21:47:02] 2026-01-10 20:46:04,190 | INFO     | total number of processed events: 400 (read)
[2026-01-10 21:47:02] 2026-01-10 20:46:04,191 | INFO     | executing command: lscpu
[2026-01-10 21:47:02] 2026-01-10 20:46:04,207 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 21:47:02] 2026-01-10 20:46:04,873 | INFO     | time since job start (5233s) is within the limit (174528.0s)
[2026-01-10 21:47:02] 2026-01-10 20:46:05,767 | INFO     | monitor loop #405: job 0:6961933616 is in state 'finished'
[2026-01-10 21:47:02] 2026-01-10 20:46:05,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:47:02] 2026-01-10 20:46:06,878 | INFO     | time since job start (5235s) is within the limit (174528.0s)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,270 | INFO     | monitor loop #406: job 0:6961933616 is in state 'finished'
[2026-01-10 21:47:02] 2026-01-10 20:46:08,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,628 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 21:47:02] 2026-01-10 20:46:08,629 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3579.4259999999995
[2026-01-10 21:47:02] 2026-01-10 20:46:08,631 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6961933616/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,631 | INFO     | extracted standard info from prmon json
[2026-01-10 21:47:02] 2026-01-10 20:46:08,631 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 21:47:02] 2026-01-10 20:46:08,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 21:47:02] 2026-01-10 20:46:08,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 21:47:02] 2026-01-10 20:46:08,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | fitting pss+swap vs Time
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | sum of square deviations: 152858680.0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | sum of deviations: -17949946559.0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | mean x: 1768075435.0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | mean y: 2635907.7848101268
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | intersect: 207624862990.5431
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | chi2: 0.15103239203303642
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | current memory leak: -117.43 B/s (using 79 data points, chi2=0.15)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,632 | INFO     | could have reported an average CPU frequency of 3732 MHz (6 samples)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | ..............................
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . Timing measurements:
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . get job = 0 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . initial setup = 1 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . payload setup = 3 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . stage-in = 0 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . payload execution = 5206 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . stage-out = 0 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | . log creation = 0 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,633 | INFO     | ..............................
[2026-01-10 21:47:02] 2026-01-10 20:46:08,662 | INFO     | 
[2026-01-10 21:47:02] 2026-01-10 20:46:08,662 | INFO     | job summary report
[2026-01-10 21:47:02] 2026-01-10 20:46:08,662 | INFO     | --------------------------------------------------
[2026-01-10 21:47:02] 2026-01-10 20:46:08,662 | INFO     | PanDA job id: 6961933616
[2026-01-10 21:47:02] 2026-01-10 20:46:08,662 | INFO     | task id: 47898826
[2026-01-10 21:47:02] 2026-01-10 20:46:08,662 | INFO     | errors: (none)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | pilot state: finished 
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | transexitcode: 0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | exeerrorcode: 0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | exeerrordiag: 
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | exitcode: 0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | exitmsg: OK
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | cpuconsumptiontime: 19962 s
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | nevents: 400
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | neventsw: 0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | pid: 1380377
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | pgrp: 1380377
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | corecount: 4
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | event service: False
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | sizes: {0: 2283917, 2: 2284179, 10: 2284207, 5213: 2310807, 5214: 2319811, 5217: 2319867, 5224: 2320189}
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | --------------------------------------------------
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | 
[2026-01-10 21:47:02] 2026-01-10 20:46:08,663 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | job 6961933616 has completed (purged errors)
[2026-01-10 21:47:02] 2026-01-10 20:46:08,677 | INFO     | overall cleanup function is called
[2026-01-10 21:47:02] 2026-01-10 20:46:09,684 | INFO     | --- collectZombieJob: --- 10, [1380377]
[2026-01-10 21:47:02] 2026-01-10 20:46:09,684 | INFO     | zombie collector waiting for pid 1380377
[2026-01-10 21:47:02] 2026-01-10 20:46:09,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 21:47:02] 2026-01-10 20:46:09,684 | INFO     | collected zombie processes
[2026-01-10 21:47:02] 2026-01-10 20:46:09,684 | INFO     | will attempt to kill all subprocesses of pid=1380377
[2026-01-10 21:47:02] 2026-01-10 20:46:09,743 | INFO     | process IDs to be killed: [1380377] (in reverse order)
[2026-01-10 21:47:02] 2026-01-10 20:46:09,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 21:47:02] 2026-01-10 20:46:09,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 21:47:02] 2026-01-10 20:46:09,776 | INFO     | did not find any defunct processes belonging to 1380377
[2026-01-10 21:47:02] 2026-01-10 20:46:09,777 | INFO     | did not find any defunct processes belonging to 1380377
[2026-01-10 21:47:02] 2026-01-10 20:46:09,777 | INFO     | ready for new job
[2026-01-10 21:47:02] 2026-01-10 20:46:09,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 21:47:02] 2026-01-10 20:46:09,778 | INFO     | ***************************************
[2026-01-10 21:47:02] 2026-01-10 20:46:09,778 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 21:47:02] 2026-01-10 20:46:09,778 | INFO     | ***************************************
[2026-01-10 21:47:02] 2026-01-10 20:46:09,778 | INFO     | 
[2026-01-10 21:47:02] 2026-01-10 20:46:09,779 | INFO     | architecture information:
[2026-01-10 21:47:02] 2026-01-10 20:46:09,779 | INFO     | executing command: cat /etc/os-release
[2026-01-10 21:47:02] 2026-01-10 20:46:09,789 | INFO     | cat /etc/os-release:
[2026-01-10 21:47:02] NAME="CentOS Linux"
[2026-01-10 21:47:02] VERSION="7 (Core)"
[2026-01-10 21:47:02] ID="centos"
[2026-01-10 21:47:02] ID_LIKE="rhel fedora"
[2026-01-10 21:47:02] VERSION_ID="7"
[2026-01-10 21:47:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 21:47:02] ANSI_COLOR="0;31"
[2026-01-10 21:47:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 21:47:02] HOME_URL="https://www.centos.org/"
[2026-01-10 21:47:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 21:47:02] 
[2026-01-10 21:47:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 21:47:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 21:47:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 21:47:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 21:47:02] 
[2026-01-10 21:47:02] 2026-01-10 20:46:09,789 | INFO     | ***************************************
[2026-01-10 21:47:02] 2026-01-10 20:46:10,293 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 21:47:02] 2026-01-10 20:46:10,307 | INFO     | sufficient remaining disk space (383613140992 B)
[2026-01-10 21:47:02] 2026-01-10 20:46:10,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 21:47:02] 2026-01-10 20:46:10,307 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 21:47:02] 2026-01-10 20:46:10,307 | INFO     | update_server=False
[2026-01-10 21:47:02] 2026-01-10 20:46:10,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 21:47:02] 2026-01-10 20:46:10,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:47:02] 2026-01-10 20:46:10,736 | INFO     | all payload control threads have been joined
[2026-01-10 21:47:02] 2026-01-10 20:46:10,773 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 21:47:02] 2026-01-10 20:46:10,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 21:47:02] 2026-01-10 20:46:10,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 21:47:02] 2026-01-10 20:46:10,773 | INFO     | will abort loop
[2026-01-10 21:47:02] 2026-01-10 20:46:10,776 | INFO     | all job control threads have been joined
[2026-01-10 21:47:02] 2026-01-10 20:46:11,140 | INFO     | all data control threads have been joined
[2026-01-10 21:47:02] 2026-01-10 20:46:11,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:47:02] 2026-01-10 20:46:11,313 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,313 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,527 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,605 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:47:02] 2026-01-10 20:46:11,742 | INFO     | [payload] control thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,779 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,781 | INFO     | [job] control thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,861 | INFO     | [job] validate thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,864 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:11,960 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:12,145 | INFO     | [data] control thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:12,199 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:12,230 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:12,277 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:13,196 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:15,743 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:47:02] 2026-01-10 20:46:40,013 | INFO     | PID=1373801 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 21:47:02] 2026-01-10 20:46:40,014 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:47:02] 2026-01-10 20:46:40,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:47:02] 2026-01-10 20:46:40,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:47:02] 2026-01-10 20:46:56,347 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:47:02] 2026-01-10 20:46:57,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002149508928)>', '<ExcThread(monitor, started 140001346045696)>']
[2026-01-10 21:47:02] 2026-01-10 20:46:58,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:47:02] 2026-01-10 20:46:58,098 | INFO     | [monitor] control thread has ended
[2026-01-10 21:47:02] 2026-01-10 20:47:02,434 | INFO     | all workflow threads have been joined
[2026-01-10 21:47:02] 2026-01-10 20:47:02,434 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:47:02] 2026-01-10 20:47:02,435 | INFO     | traces error code: 0
[2026-01-10 21:47:02] 2026-01-10 20:47:02,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:47:02] 2026-01-10 20:47:02,487 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:47:02] 2026-01-10 20:47:02,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:47:02] 2026-01-10 20:47:02,492 [wrapper] pilotpid: 1373801
[2026-01-10 21:47:02] 2026-01-10 20:47:02,494 [wrapper] Pilot exit status: 0
[2026-01-10 21:47:02] 2026-01-10 20:47:02,502 [wrapper] pandaids: 6961933616
[2026-01-10 21:47:02] 2026-01-10 20:47:02,523 [wrapper] cleanup supervisor_pilot 1393900 1373802
[2026-01-10 21:47:02] 2026-01-10 20:47:02,526 [wrapper] Test setup, not cleaning
[2026-01-10 21:47:02] 2026-01-10 20:47:02,528 [wrapper] apfmon messages muted
[2026-01-10 21:47:02] 2026-01-10 20:47:02,531 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:47:02] 2026-01-10 20:47:02,533 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:47:02]  *** Error codes and diagnostics ***
[2026-01-10 21:47:02]     "exeErrorCode": 0,
[2026-01-10 21:47:02]     "exeErrorDiag": "",
[2026-01-10 21:47:02]     "pilotErrorCode": 0,
[2026-01-10 21:47:02]     "pilotErrorDiag": "",
[2026-01-10 21:47:02]  *** Listing of results directory ***
[2026-01-10 21:47:02] total 433512
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc    579449 Jan  7 14:00 pilot3.tar.gz
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc      5112 Jan  7 14:04 queuedata.json
[2026-01-10 21:47:02] -rwx------ 1 boinc boinc     36322 Jan  7 14:04 runpilot2-wrapper.sh
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc       100 Jan 10 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:47:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 20:18 run_atlas
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc       105 Jan 10 20:18 job.xml
[2026-01-10 21:47:02] -rw-r--r-- 2 boinc boinc 224332767 Jan 10 20:18 EVNT.47898824._000112.pool.root.1
[2026-01-10 21:47:02] -rw-r--r-- 2 boinc boinc    592403 Jan 10 20:18 input.tar.gz
[2026-01-10 21:47:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 20:18 start_atlas.sh
[2026-01-10 21:47:02] drwxrwx--x 2 boinc boinc      4096 Jan 10 20:18 shared
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 20:18 boinc_setup_complete
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc      6445 Jan 10 20:18 init_data.xml
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 20:18 boinc_lockfile
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc      2516 Jan 10 20:18 pandaJob.out
[2026-01-10 21:47:02] -rw------- 1 boinc boinc    989540 Jan 10 20:18 agis_schedconf.cvmfs.json
[2026-01-10 21:47:02] -rw------- 1 boinc boinc   1516240 Jan 10 20:18 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:47:02] drwx------ 5 boinc boinc      4096 Jan 10 20:18 pilot3
[2026-01-10 21:47:02] -rw------- 1 boinc boinc 213582610 Jan 10 21:45 HITS.47898826._007222.pool.root.1
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc       529 Jan 10 21:45 boinc_task_state.xml
[2026-01-10 21:47:02] -rw------- 1 boinc boinc      1012 Jan 10 21:45 memory_monitor_summary.json
[2026-01-10 21:47:02] -rw------- 1 boinc boinc    275665 Jan 10 21:45 log.47898826._007222.job.log.tgz.1
[2026-01-10 21:47:02] -rw------- 1 boinc boinc      7743 Jan 10 21:46 heartbeat.json
[2026-01-10 21:47:02] -rw------- 1 boinc boinc        95 Jan 10 21:46 pilot_heartbeat.json
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc        27 Jan 10 21:46 wrapper_checkpoint.txt
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc      8192 Jan 10 21:46 boinc_mmap_file
[2026-01-10 21:47:02] -rw------- 1 boinc boinc      4938 Jan 10 21:47 pilotlog.txt
[2026-01-10 21:47:02] -rw------- 1 boinc boinc    765522 Jan 10 21:47 log.47898826._007222.job.log.1
[2026-01-10 21:47:02] -rw------- 1 boinc boinc       357 Jan 10 21:47 output.list
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc       620 Jan 10 21:47 runtime_log
[2026-01-10 21:47:02] -rw------- 1 boinc boinc   1064960 Jan 10 21:47 result.tar.gz
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc      8897 Jan 10 21:47 runtime_log.err
[2026-01-10 21:47:02] -rw------- 1 boinc boinc       658 Jan 10 21:47 LSMODm9Nix8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEyhKDmlsXGon.diag
[2026-01-10 21:47:02] -rw-r--r-- 1 boinc boinc     22261 Jan 10 21:47 stderr.txt
[2026-01-10 21:47:02] HITS file was successfully produced:
[2026-01-10 21:47:02] -rw------- 1 boinc boinc 213582610 Jan 10 21:45 shared/HITS.pool.root.1
[2026-01-10 21:47:02]  *** Contents of shared directory: ***
[2026-01-10 21:47:02] total 429300
[2026-01-10 21:47:02] -rw-r--r-- 2 boinc boinc 224332767 Jan 10 20:18 ATLAS.root_0
[2026-01-10 21:47:02] -rw-r--r-- 2 boinc boinc    592403 Jan 10 20:18 input.tar.gz
[2026-01-10 21:47:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 20:18 start_atlas.sh
[2026-01-10 21:47:02] -rw------- 1 boinc boinc 213582610 Jan 10 21:45 HITS.pool.root.1
[2026-01-10 21:47:02] -rw------- 1 boinc boinc   1064960 Jan 10 21:47 result.tar.gz
21:47:04 (1370017): run_atlas exited; CPU time 19987.716239
21:47:04 (1370017): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN