Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:32:21 (13992): wrapper (7.7.26015): starting
04:32:21 (13992): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:32:21] Arguments: --nthreads 8
[2026-01-10 04:32:21] Threads: 8
[2026-01-10 04:32:21] Checking for CVMFS
[2026-01-10 04:32:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:32:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:32:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:32:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:32:21] 2.11.0.0 4369 129549 109220 154966 3 56 3584005 4096000 0 130560 2 10289073 99.430 9143444 531 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 04:32:21] CVMFS is ok
[2026-01-10 04:32:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:32:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:32:21] Further information can be found at the LHC@home message board.
[2026-01-10 04:32:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:32:21] Checking for apptainer binary...
[2026-01-10 04:32:21] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 04:32:21] apptainer is not installed, using version from CVMFS
[2026-01-10 04:32:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:32:21] WARNING: Environment variable TMPDIR already has value [/tmp/job_11010991/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node065
[2026-01-10 04:32:21] apptainer works
[2026-01-10 04:32:21] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:32:21] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:32:21] Starting ATLAS job with PandaID=6963379033
[2026-01-10 04:32:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11010991/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:19:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:19:07] 2026-01-10 08:18:34,460 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:19:07] 2026-01-10 08:18:34,460 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:19:07] 2026-01-10 08:18:34,460 | INFO     | job 6963379033 has finished - writing final server update
[2026-01-10 09:19:07] 2026-01-10 08:18:34,460 | INFO     | total number of processed events: 900 (read)
[2026-01-10 09:19:07] 2026-01-10 08:18:34,461 | INFO     | executing command: lscpu
[2026-01-10 09:19:07] 2026-01-10 08:18:34,491 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:19:07] 2026-01-10 08:18:35,502 | WARNING  | process 26831 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:19:07] 2026-01-10 08:18:35,502 | INFO     | using path: /tmp/job_11010991/atlas/pilot/slots/0/PanDA_Pilot-6963379033/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:19:07] 2026-01-10 08:18:35,588 | INFO     | number of running child processes to parent process 26831: 1
[2026-01-10 09:19:07] 2026-01-10 08:18:35,588 | INFO     | maximum number of monitored processes: 16
[2026-01-10 09:19:07] 2026-01-10 08:18:36,097 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:19:07] 2026-01-10 08:18:36,102 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2380.67625
[2026-01-10 09:19:07] 2026-01-10 08:18:36,107 | INFO     | using path: /tmp/job_11010991/atlas/pilot/slots/0/PanDA_Pilot-6963379033/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,107 | INFO     | extracted standard info from prmon json
[2026-01-10 09:19:07] 2026-01-10 08:18:36,107 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:19:07] 2026-01-10 08:18:36,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:19:07] 2026-01-10 08:18:36,110 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:19:07] 2026-01-10 08:18:36,110 | INFO     | sum of square deviations: 6953769450.5
[2026-01-10 09:19:07] 2026-01-10 08:18:36,111 | INFO     | sum of deviations: 2083213820945.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,111 | INFO     | mean x: 1768024534.5
[2026-01-10 09:19:07] 2026-01-10 08:18:36,111 | INFO     | mean y: 5568448.007092198
[2026-01-10 09:19:07] 2026-01-10 08:18:36,111 | INFO     | intersect: -529660129021.3586
[2026-01-10 09:19:07] 2026-01-10 08:18:36,111 | INFO     | chi2: 7.7776471688394615
[2026-01-10 09:19:07] 2026-01-10 08:18:36,112 | INFO     | sum of square deviations: 6590404498.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | sum of deviations: 2222841054263.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | mean x: 1768024382.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | mean y: 5626729.21299639
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | intersect: -596321530798.1017
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | chi2: 3.9802820020251644
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | current chi2=3.9802820020251644 (change=48.824086312736654 %)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,113 | INFO     | sum of square deviations: 6239923508.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,114 | INFO     | sum of deviations: 2153241717336.4998
[2026-01-10 09:19:07] 2026-01-10 08:18:36,114 | INFO     | mean x: 1768024229.5
[2026-01-10 09:19:07] 2026-01-10 08:18:36,114 | INFO     | mean y: 5596442.37867647
[2026-01-10 09:19:07] 2026-01-10 08:18:36,114 | INFO     | intersect: -610095396516.9603
[2026-01-10 09:19:07] 2026-01-10 08:18:36,114 | INFO     | chi2: 3.7422957017907312
[2026-01-10 09:19:07] 2026-01-10 08:18:36,114 | INFO     | current chi2=3.7422957017907312 (change=5.979131632214649 %)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,115 | INFO     | right removable region: 271
[2026-01-10 09:19:07] 2026-01-10 08:18:36,115 | INFO     | sum of square deviations: 6590404498.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | sum of deviations: 1922198236134.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | mean x: 1768024687.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | mean y: 5635862.736462094
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | intersect: -515667406030.8398
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | chi2: 6.639374412644203
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | current chi2=6.639374412644203 (change=14.63518119921484 %)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | left removable region: 10
[2026-01-10 09:19:07] 2026-01-10 08:18:36,116 | INFO     | sum of square deviations: 5513070810.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,117 | INFO     | sum of deviations: 1868471292973.9998
[2026-01-10 09:19:07] 2026-01-10 08:18:36,117 | INFO     | mean x: 1768024504.0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,117 | INFO     | mean y: 5715397.731800767
[2026-01-10 09:19:07] 2026-01-10 08:18:36,117 | INFO     | intersect: -599207163385.9882
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | chi2: 2.567965146554752
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | current memory leak: 338.92 B/s (using 261 data points, chi2=2.57)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | could have reported an average CPU frequency of 2442 MHz (13 samples)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | ..............................
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . Timing measurements:
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . get job = 0 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . initial setup = 1 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . payload setup = 2 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . stage-in = 0 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . payload execution = 17144 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . stage-out = 1 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | . log creation = 0 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,118 | INFO     | ..............................
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | 
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | job summary report
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | --------------------------------------------------
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | PanDA job id: 6963379033
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | task id: 47962010
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | errors: (none)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | pilot state: finished 
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | transexitcode: 0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | exeerrorcode: 0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | exeerrordiag: 
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | exitcode: 0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | exitmsg: OK
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | cpuconsumptiontime: 131332 s
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | nevents: 900
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | neventsw: 0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | pid: 26831
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | pgrp: 26831
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | corecount: 8
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | event service: False
[2026-01-10 09:19:07] 2026-01-10 08:18:36,167 | INFO     | sizes: {0: 2284748, 2: 2285010, 11: 2285038, 17151: 2318142, 17153: 2327166, 17156: 2327222, 17158: 2327596}
[2026-01-10 09:19:07] 2026-01-10 08:18:36,168 | INFO     | --------------------------------------------------
[2026-01-10 09:19:07] 2026-01-10 08:18:36,168 | INFO     | 
[2026-01-10 09:19:07] 2026-01-10 08:18:36,168 | INFO     | executing command: ls -lF /tmp/job_11010991/atlas/pilot/slots/0
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,177 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,177 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:19:07] 2026-01-10 08:18:36,177 | INFO     | job 6963379033 has completed (purged errors)
[2026-01-10 09:19:07] 2026-01-10 08:18:36,177 | INFO     | overall cleanup function is called
[2026-01-10 09:19:07] 2026-01-10 08:18:37,184 | INFO     | --- collectZombieJob: --- 10, [26831]
[2026-01-10 09:19:07] 2026-01-10 08:18:37,184 | INFO     | zombie collector waiting for pid 26831
[2026-01-10 09:19:07] 2026-01-10 08:18:37,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:19:07] 2026-01-10 08:18:37,184 | INFO     | collected zombie processes
[2026-01-10 09:19:07] 2026-01-10 08:18:37,184 | INFO     | will attempt to kill all subprocesses of pid=26831
[2026-01-10 09:19:07] 2026-01-10 08:18:37,270 | INFO     | process IDs to be killed: [26831] (in reverse order)
[2026-01-10 09:19:07] 2026-01-10 08:18:37,298 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:19:07] 2026-01-10 08:18:37,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:19:07] 2026-01-10 08:18:37,301 | INFO     | did not find any defunct processes belonging to 26831
[2026-01-10 09:19:07] 2026-01-10 08:18:37,304 | INFO     | did not find any defunct processes belonging to 26831
[2026-01-10 09:19:07] 2026-01-10 08:18:37,304 | INFO     | ready for new job
[2026-01-10 09:19:07] 2026-01-10 08:18:37,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:19:07] 2026-01-10 08:18:37,305 | INFO     | ***************************************
[2026-01-10 09:19:07] 2026-01-10 08:18:37,305 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:19:07] 2026-01-10 08:18:37,305 | INFO     | ***************************************
[2026-01-10 09:19:07] 2026-01-10 08:18:37,305 | INFO     | 
[2026-01-10 09:19:07] 2026-01-10 08:18:37,320 | INFO     | architecture information:
[2026-01-10 09:19:07] 2026-01-10 08:18:37,320 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:19:07] 2026-01-10 08:18:37,326 | INFO     | cat /etc/os-release:
[2026-01-10 09:19:07] NAME="CentOS Linux"
[2026-01-10 09:19:07] VERSION="7 (Core)"
[2026-01-10 09:19:07] ID="centos"
[2026-01-10 09:19:07] ID_LIKE="rhel fedora"
[2026-01-10 09:19:07] VERSION_ID="7"
[2026-01-10 09:19:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:19:07] ANSI_COLOR="0;31"
[2026-01-10 09:19:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:19:07] HOME_URL="https://www.centos.org/"
[2026-01-10 09:19:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:19:07] 
[2026-01-10 09:19:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:19:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:19:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:19:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:19:07] 
[2026-01-10 09:19:07] 2026-01-10 08:18:37,326 | INFO     | ***************************************
[2026-01-10 09:19:07] 2026-01-10 08:18:37,828 | INFO     | executing command: df -mP /tmp/job_11010991/atlas/pilot/slots/0
[2026-01-10 09:19:07] 2026-01-10 08:18:37,834 | INFO     | sufficient remaining disk space (226271166464 B)
[2026-01-10 09:19:07] 2026-01-10 08:18:37,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:19:07] 2026-01-10 08:18:37,835 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:19:07] 2026-01-10 08:18:37,835 | INFO     | update_server=False
[2026-01-10 09:19:07] 2026-01-10 08:18:37,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:19:07] 2026-01-10 08:18:37,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:19:07] 2026-01-10 08:18:37,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:19:07] 2026-01-10 08:18:38,091 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:19:07] 2026-01-10 08:18:38,091 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:19:07] 2026-01-10 08:18:38,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:19:07] 2026-01-10 08:18:38,091 | INFO     | will abort loop
[2026-01-10 09:19:07] 2026-01-10 08:18:38,290 | INFO     | all payload control threads have been joined
[2026-01-10 09:19:07] 2026-01-10 08:18:38,365 | INFO     | all data control threads have been joined
[2026-01-10 09:19:07] 2026-01-10 08:18:38,826 | INFO     | all job control threads have been joined
[2026-01-10 09:19:07] 2026-01-10 08:18:38,840 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:38,840 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,096 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,296 | INFO     | [payload] control thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,327 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,370 | INFO     | [data] control thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,640 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,823 | INFO     | [job] validate thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,825 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,831 | INFO     | [job] control thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,840 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,912 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:39,982 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:40,048 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:40,140 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:40,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:19:07] 2026-01-10 08:18:44,470 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:19:07] 2026-01-10 08:18:54,281 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:19:07] 2026-01-10 08:18:56,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2026-01-10 09:19:07] 2026-01-10 08:19:01,084 | INFO     | all workflow threads have been joined
[2026-01-10 09:19:07] 2026-01-10 08:19:01,084 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:19:07] 2026-01-10 08:19:01,084 | INFO     | traces error code: 0
[2026-01-10 09:19:07] 2026-01-10 08:19:01,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:19:07] 2026-01-10 08:19:07,636 | INFO     | PID=18706 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:19:07] 2026-01-10 08:19:07,636 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:19:07] 2026-01-10 08:19:07,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:19:07] 2026-01-10 08:19:07,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:19:07] 2026-01-10 08:19:07,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:19:07] 2026-01-10 08:19:07,637 | INFO     | [monitor] control thread has ended
[2026-01-10 09:19:07] 2026-01-10 08:19:07,690 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:19:07] 2026-01-10 08:19:07,691 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:19:07] 2026-01-10 08:19:07,693 [wrapper] pilotpid: 18706
[2026-01-10 09:19:07] 2026-01-10 08:19:07,694 [wrapper] Pilot exit status: 0
[2026-01-10 09:19:07] 2026-01-10 08:19:07,698 [wrapper] pandaids: 6963379033
[2026-01-10 09:19:07] 2026-01-10 08:19:07,717 [wrapper] cleanup supervisor_pilot  5329 18707
[2026-01-10 09:19:07] 2026-01-10 08:19:07,718 [wrapper] Test setup, not cleaning
[2026-01-10 09:19:07] 2026-01-10 08:19:07,719 [wrapper] apfmon messages muted
[2026-01-10 09:19:07] 2026-01-10 08:19:07,720 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:19:07] 2026-01-10 08:19:07,721 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:19:07]  *** Error codes and diagnostics ***
[2026-01-10 09:19:07]     "exeErrorCode": 0,
[2026-01-10 09:19:07]     "exeErrorDiag": "",
[2026-01-10 09:19:07]     "pilotErrorCode": 0,
[2026-01-10 09:19:07]     "pilotErrorDiag": "",
[2026-01-10 09:19:07]  *** Listing of results directory ***
[2026-01-10 09:19:07] total 1175024
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 09:19:07] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:15 runpilot2-wrapper.sh
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:16 queuedata.json
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user       100 Jan 10 02:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:19:07] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 02:52 run_atlas
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user       105 Jan 10 02:52 job.xml
[2026-01-10 09:19:07] -rw-r--r-- 2 mf493845 unix-user 393896601 Jan 10 04:32 EVNT.47962006._000108.pool.root.1
[2026-01-10 09:19:07] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:32 start_atlas.sh
[2026-01-10 09:19:07] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 04:32 shared
[2026-01-10 09:19:07] -rw-r--r-- 2 mf493845 unix-user    592618 Jan 10 04:32 input.tar.gz
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      6390 Jan 10 04:32 init_data.xml
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user         0 Jan 10 04:32 boinc_setup_complete
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      8192 Jan 10 04:32 boinc_mmap_file
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user         0 Jan 10 04:32 boinc_lockfile
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      2892 Jan 10 04:32 pandaJob.out
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user    989374 Jan 10 04:32 agis_schedconf.cvmfs.json
[2026-01-10 09:19:07] drwx------ 5 mf493845 unix-user       440 Jan 10 04:32 pilot3
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user 797514516 Jan 10 09:18 HITS.47962010._001323.pool.root.1
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      1029 Jan 10 09:18 memory_monitor_summary.json
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user   1516240 Jan 10 09:18 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user   1547442 Jan 10 09:18 log.47962010._001323.job.log.tgz.1
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      8585 Jan 10 09:18 heartbeat.json
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user       745 Jan 10 09:19 pilotlog.txt
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user        95 Jan 10 09:19 pilot_heartbeat.json
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user   2414683 Jan 10 09:19 log.47962010._001323.job.log.1
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user       353 Jan 10 09:19 output.list
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user       620 Jan 10 09:19 runtime_log
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user   3983360 Jan 10 09:19 result.tar.gz
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user       651 Jan 10 09:19 Y5PODmGtLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTKhKDm1r05Co.diag
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user      9221 Jan 10 09:19 runtime_log.err
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user     21868 Jan 10 09:19 stderr.txt
[2026-01-10 09:19:07] HITS file was successfully produced:
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user 797514516 Jan 10 09:18 shared/HITS.pool.root.1
[2026-01-10 09:19:07]  *** Contents of shared directory: ***
[2026-01-10 09:19:07] total 1167980
[2026-01-10 09:19:07] -rw-r--r-- 2 mf493845 unix-user 393896601 Jan 10 04:32 ATLAS.root_0
[2026-01-10 09:19:07] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:32 start_atlas.sh
[2026-01-10 09:19:07] -rw-r--r-- 2 mf493845 unix-user    592618 Jan 10 04:32 input.tar.gz
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user 797514516 Jan 10 09:18 HITS.pool.root.1
[2026-01-10 09:19:07] -rw------- 1 mf493845 unix-user   3983360 Jan 10 09:19 result.tar.gz
09:19:09 (13992): run_atlas exited; CPU time 131486.254906
09:19:09 (13992): called boinc_finish(0)

</stderr_txt>
]]>

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