Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:45:55 (3056522): wrapper (7.7.26015): starting
05:45:55 (3056522): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 05:45:55] Arguments: --nthreads 4
[2026-01-10 05:45:55] Threads: 4
[2026-01-10 05:45:55] Checking for CVMFS
[2026-01-10 05:45:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:45:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:45:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:45:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:45:56] 2.13.3.0 180034 4027 57748 154976 3 253 3005968 4096000 6310 130560 0 19770794 99.985 350416 3028 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 05:45:56] CVMFS is ok
[2026-01-10 05:45:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 05:45:56] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 05:45:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 05:45:56] Further information can be found at the LHC@home message board.
[2026-01-10 05:45:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:45:56] Checking for apptainer binary...
[2026-01-10 05:45:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:45:56] Running /usr/bin/apptainer --version
[2026-01-10 05:45:56] apptainer version 1.4.1
[2026-01-10 05:45:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:45:56] linux-7950X
[2026-01-10 05:45:56] apptainer works
[2026-01-10 05:45:56] Set ATHENA_PROC_NUMBER=4
[2026-01-10 05:45:56] Set ATHENA_CORE_NUMBER=4
[2026-01-10 05:45:56] Starting ATLAS job with PandaID=6963165999
[2026-01-10 05:45:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:38:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:38:19] 2026-01-10 12:37:39,519 | INFO     | job 6963165999 has finished - writing final server update
[2026-01-10 07:38:19] 2026-01-10 12:37:39,519 | INFO     | total number of processed events: 400 (read)
[2026-01-10 07:38:19] 2026-01-10 12:37:39,520 | INFO     | executing command: lscpu
[2026-01-10 07:38:19] 2026-01-10 12:37:39,535 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 07:38:19] 2026-01-10 12:37:40,390 | INFO     | monitor loop #510: job 0:6963165999 is in state 'finished'
[2026-01-10 07:38:19] 2026-01-10 12:37:40,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,852 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 07:38:19] 2026-01-10 12:37:40,854 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3354.52509375
[2026-01-10 07:38:19] 2026-01-10 12:37:40,856 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6963165999/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,856 | INFO     | extracted standard info from prmon json
[2026-01-10 07:38:19] 2026-01-10 12:37:40,856 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:38:19] 2026-01-10 12:37:40,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:38:19] 2026-01-10 12:37:40,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 07:38:19] 2026-01-10 12:37:40,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | sum of square deviations: 412686807.5
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | sum of deviations: 11641337020.500002
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | mean x: 1768045309.5
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | mean y: 2307268.518181818
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | intersect: -49871861087.11488
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | chi2: 1.3174764748342356
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | sum of square deviations: 358927660.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | sum of deviations: 10436508605.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | mean x: 1768045157.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | mean y: 2303853.8
[2026-01-10 07:38:19] 2026-01-10 12:37:40,857 | INFO     | intersect: -51406992646.38913
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | chi2: 1.3190131544448485
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | current chi2=1.3190131544448485 (change=-0.11663810625584213 %)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | right removable region: 104
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | sum of square deviations: 358927660.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | sum of deviations: -1115037422.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | mean x: 1768045462.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | mean y: 2342497.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | intersect: 5494916833.364266
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | chi2: 0.010013317250913907
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | current chi2=0.010013317250913907 (change=99.23996234906785 %)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | sum of square deviations: 310052325.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | sum of deviations: -735388245.0000007
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | mean x: 1768045614.5
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | mean y: 2341303.82
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | intersect: 4195826908.3130574
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | chi2: 0.009754280030200312
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | current chi2=0.009754280030200312 (change=2.5869271313655124 %)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | left removable region: 20
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | sum of square deviations: 183761585.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | sum of deviations: -41648848.0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | mean x: 1768045736.5
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | mean y: 2333392.5476190476
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | intersect: 403054077.10493034
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | chi2: 0.003943263173015794
[2026-01-10 07:38:19] 2026-01-10 12:37:40,858 | INFO     | current memory leak: -0.23 B/s (using 84 data points, chi2=0.00)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | could have reported an average CPU frequency of 4198 MHz (7 samples)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | ..............................
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . Timing measurements:
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . get job = 0 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . initial setup = 2 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . payload setup = 3 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . stage-in = 0 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . payload execution = 6674 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . stage-out = 0 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | . log creation = 0 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,859 | INFO     | ..............................
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | 
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | job summary report
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | --------------------------------------------------
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | PanDA job id: 6963165999
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | task id: 47898826
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | errors: (none)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | pilot state: finished 
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | transexitcode: 0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | exeerrorcode: 0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | exeerrordiag: 
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | exitcode: 0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,882 | INFO     | exitmsg: OK
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | cpuconsumptiontime: 25629 s
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | nevents: 400
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | neventsw: 0
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | pid: 3067028
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | pgrp: 3067028
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | corecount: 4
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | event service: False
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | sizes: {0: 2283978, 3: 2284240, 11: 2284268, 6680: 2311562, 6681: 2320630, 6683: 2320768}
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | --------------------------------------------------
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | 
[2026-01-10 07:38:19] 2026-01-10 12:37:40,883 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | job 6963165999 has completed (purged errors)
[2026-01-10 07:38:19] 2026-01-10 12:37:40,891 | INFO     | overall cleanup function is called
[2026-01-10 07:38:19] 2026-01-10 12:37:41,897 | INFO     | --- collectZombieJob: --- 10, [3067028]
[2026-01-10 07:38:19] 2026-01-10 12:37:41,898 | INFO     | zombie collector waiting for pid 3067028
[2026-01-10 07:38:19] 2026-01-10 12:37:41,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:38:19] 2026-01-10 12:37:41,898 | INFO     | collected zombie processes
[2026-01-10 07:38:19] 2026-01-10 12:37:41,898 | INFO     | will attempt to kill all subprocesses of pid=3067028
[2026-01-10 07:38:19] 2026-01-10 12:37:41,943 | INFO     | process IDs to be killed: [3067028] (in reverse order)
[2026-01-10 07:38:19] 2026-01-10 12:37:41,966 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:38:19] 2026-01-10 12:37:41,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:38:19] 2026-01-10 12:37:41,968 | INFO     | did not find any defunct processes belonging to 3067028
[2026-01-10 07:38:19] 2026-01-10 12:37:41,969 | INFO     | did not find any defunct processes belonging to 3067028
[2026-01-10 07:38:19] 2026-01-10 12:37:41,969 | INFO     | ready for new job
[2026-01-10 07:38:19] 2026-01-10 12:37:41,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:38:19] 2026-01-10 12:37:41,970 | INFO     | ***************************************
[2026-01-10 07:38:19] 2026-01-10 12:37:41,970 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:38:19] 2026-01-10 12:37:41,970 | INFO     | ***************************************
[2026-01-10 07:38:19] 2026-01-10 12:37:41,970 | INFO     | 
[2026-01-10 07:38:19] 2026-01-10 12:37:41,971 | INFO     | architecture information:
[2026-01-10 07:38:19] 2026-01-10 12:37:41,971 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:38:19] 2026-01-10 12:37:41,976 | INFO     | cat /etc/os-release:
[2026-01-10 07:38:19] NAME="CentOS Linux"
[2026-01-10 07:38:19] VERSION="7 (Core)"
[2026-01-10 07:38:19] ID="centos"
[2026-01-10 07:38:19] ID_LIKE="rhel fedora"
[2026-01-10 07:38:19] VERSION_ID="7"
[2026-01-10 07:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:38:19] ANSI_COLOR="0;31"
[2026-01-10 07:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:38:19] HOME_URL="https://www.centos.org/"
[2026-01-10 07:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:38:19] 
[2026-01-10 07:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:38:19] 
[2026-01-10 07:38:19] 2026-01-10 12:37:41,976 | INFO     | ***************************************
[2026-01-10 07:38:19] 2026-01-10 12:37:42,479 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-10 07:38:19] 2026-01-10 12:37:42,486 | INFO     | sufficient remaining disk space (896783089664 B)
[2026-01-10 07:38:19] 2026-01-10 12:37:42,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:38:19] 2026-01-10 12:37:42,486 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:38:19] 2026-01-10 12:37:42,486 | INFO     | update_server=False
[2026-01-10 07:38:19] 2026-01-10 12:37:42,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:38:19] 2026-01-10 12:37:42,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:38:19] 2026-01-10 12:37:42,828 | INFO     | job.realtimelogging is not enabled
[2026-01-10 07:38:19] 2026-01-10 12:37:42,893 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 07:38:19] 2026-01-10 12:37:42,893 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 07:38:19] 2026-01-10 12:37:42,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:38:19] 2026-01-10 12:37:42,893 | INFO     | will abort loop
[2026-01-10 07:38:19] 2026-01-10 12:37:42,967 | INFO     | all payload control threads have been joined
[2026-01-10 07:38:19] 2026-01-10 12:37:43,117 | INFO     | all job control threads have been joined
[2026-01-10 07:38:19] 2026-01-10 12:37:43,492 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:43,492 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:43,519 | INFO     | all data control threads have been joined
[2026-01-10 07:38:19] 2026-01-10 12:37:43,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:38:19] 2026-01-10 12:37:43,756 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:43,834 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:43,895 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:43,972 | INFO     | [payload] control thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,122 | INFO     | [job] control thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:38:19] 2026-01-10 12:37:44,524 | INFO     | [data] control thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,583 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,618 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,682 | INFO     | [job] validate thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,710 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,880 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:44,941 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:45,725 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:37:48,241 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:38:19] 2026-01-10 12:38:12,444 | INFO     | PID=3060369 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:38:19] 2026-01-10 12:38:12,444 | INFO     | .. there are 3 such processes running
[2026-01-10 07:38:19] 2026-01-10 12:38:12,445 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:38:19] 2026-01-10 12:38:12,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:38:19] 2026-01-10 12:38:12,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:38:19] 2026-01-10 12:38:13,736 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:38:19] 2026-01-10 12:38:14,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126167880066880)>', '<ExcThread(monitor, started 126167382210304)>']
[2026-01-10 07:38:19] 2026-01-10 12:38:14,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:38:19] 2026-01-10 12:38:14,455 | INFO     | [monitor] control thread has ended
[2026-01-10 07:38:19] 2026-01-10 12:38:19,174 | INFO     | all workflow threads have been joined
[2026-01-10 07:38:19] 2026-01-10 12:38:19,174 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:38:19] 2026-01-10 12:38:19,174 | INFO     | traces error code: 0
[2026-01-10 07:38:19] 2026-01-10 12:38:19,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:38:19] 2026-01-10 12:38:19,210 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:38:19] 2026-01-10 12:38:19,211 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:38:19] 2026-01-10 12:38:19,212 [wrapper] pilotpid: 3060369
[2026-01-10 07:38:19] 2026-01-10 12:38:19,213 [wrapper] Pilot exit status: 0
[2026-01-10 07:38:19] 2026-01-10 12:38:19,216 [wrapper] pandaids: 6963165999
[2026-01-10 07:38:19] 2026-01-10 12:38:19,233 [wrapper] cleanup supervisor_pilot 3140567 3060370
[2026-01-10 07:38:19] 2026-01-10 12:38:19,235 [wrapper] Test setup, not cleaning
[2026-01-10 07:38:19] 2026-01-10 12:38:19,236 [wrapper] apfmon messages muted
[2026-01-10 07:38:19] 2026-01-10 12:38:19,237 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:38:19] 2026-01-10 12:38:19,238 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:38:19]  *** Error codes and diagnostics ***
[2026-01-10 07:38:19]     "exeErrorCode": 0,
[2026-01-10 07:38:19]     "exeErrorDiag": "",
[2026-01-10 07:38:19]     "pilotErrorCode": 0,
[2026-01-10 07:38:19]     "pilotErrorDiag": "",
[2026-01-10 07:38:19]  *** Listing of results directory ***
[2026-01-10 07:38:19] total 444400
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-10 07:38:19] -rwx------ 1 boinc boinc     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:02 queuedata.json
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc       100 Jan 10 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:38:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 05:45 run_atlas
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc       105 Jan 10 05:45 job.xml
[2026-01-10 07:38:19] -rw-r--r-- 2 boinc boinc 225341910 Jan 10 05:45 EVNT.47898824._001360.pool.root.1
[2026-01-10 07:38:19] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:45 start_atlas.sh
[2026-01-10 07:38:19] drwxrwx--x 2 boinc boinc      4096 Jan 10 05:45 shared
[2026-01-10 07:38:19] -rw-r--r-- 2 boinc boinc    592398 Jan 10 05:45 input.tar.gz
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc      9845 Jan 10 05:45 init_data.xml
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:45 boinc_lockfile
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc      2520 Jan 10 05:45 pandaJob.out
[2026-01-10 07:38:19] -rw------- 1 boinc boinc    989548 Jan 10 05:46 agis_schedconf.cvmfs.json
[2026-01-10 07:38:19] -rw------- 1 boinc boinc   1516240 Jan 10 05:46 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:38:19] drwx------ 5 boinc boinc      4096 Jan 10 05:46 pilot3
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc       530 Jan 10 07:37 boinc_task_state.xml
[2026-01-10 07:38:19] -rw------- 1 boinc boinc 223219848 Jan 10 07:37 HITS.47898826._035112.pool.root.1
[2026-01-10 07:38:19] -rw------- 1 boinc boinc      1021 Jan 10 07:37 memory_monitor_summary.json
[2026-01-10 07:38:19] -rw------- 1 boinc boinc    297150 Jan 10 07:37 log.47898826._035112.job.log.tgz.1
[2026-01-10 07:38:19] -rw------- 1 boinc boinc      7737 Jan 10 07:37 heartbeat.json
[2026-01-10 07:38:19] -rw------- 1 boinc boinc        95 Jan 10 07:38 pilot_heartbeat.json
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc      8192 Jan 10 07:38 boinc_mmap_file
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc        27 Jan 10 07:38 wrapper_checkpoint.txt
[2026-01-10 07:38:19] -rw------- 1 boinc boinc      5089 Jan 10 07:38 pilotlog.txt
[2026-01-10 07:38:19] -rw------- 1 boinc boinc    992533 Jan 10 07:38 log.47898826._035112.job.log.1
[2026-01-10 07:38:19] -rw------- 1 boinc boinc       357 Jan 10 07:38 output.list
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc       620 Jan 10 07:38 runtime_log
[2026-01-10 07:38:19] -rw------- 1 boinc boinc   1310720 Jan 10 07:38 result.tar.gz
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc      8897 Jan 10 07:38 runtime_log.err
[2026-01-10 07:38:19] -rw------- 1 boinc boinc       644 Jan 10 07:38 EjRNDmM1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyzlKDmrjqaUo.diag
[2026-01-10 07:38:19] -rw-r--r-- 1 boinc boinc     21333 Jan 10 07:38 stderr.txt
[2026-01-10 07:38:19] HITS file was successfully produced:
[2026-01-10 07:38:19] -rw------- 1 boinc boinc 223219848 Jan 10 07:37 shared/HITS.pool.root.1
[2026-01-10 07:38:19]  *** Contents of shared directory: ***
[2026-01-10 07:38:19] total 439940
[2026-01-10 07:38:19] -rw-r--r-- 2 boinc boinc 225341910 Jan 10 05:45 ATLAS.root_0
[2026-01-10 07:38:19] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:45 start_atlas.sh
[2026-01-10 07:38:19] -rw-r--r-- 2 boinc boinc    592398 Jan 10 05:45 input.tar.gz
[2026-01-10 07:38:19] -rw------- 1 boinc boinc 223219848 Jan 10 07:37 HITS.pool.root.1
[2026-01-10 07:38:19] -rw------- 1 boinc boinc   1310720 Jan 10 07:38 result.tar.gz
07:38:20 (3056522): run_atlas exited; CPU time 25673.960818
07:38:20 (3056522): called boinc_finish(0)

</stderr_txt>
]]>

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