Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:21:23 (3707933): wrapper (7.7.26015): starting
15:21:23 (3707933): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 15:21:23] Arguments: --nthreads 3
[2026-01-10 15:21:23] Threads: 3
[2026-01-10 15:21:23] Checking for CVMFS
[2026-01-10 15:21:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 15:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 15:21:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 15:21:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 15:21:23] 2.9.2.0 2849566 3487 83780 154982 3 56 21534833 36864000 0 130560 0 2238054 99.988 130507 3340 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 15:21:23] CVMFS is ok
[2026-01-10 15:21:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 15:21:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 15:21:23] Further information can be found at the LHC@home message board.
[2026-01-10 15:21:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 15:21:23] Checking for apptainer binary...
[2026-01-10 15:21:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 15:21:23] Running /usr/bin/apptainer --version
[2026-01-10 15:21:23] apptainer version 1.4.1-1.1
[2026-01-10 15:21:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 15:21:23] atlasA303a
[2026-01-10 15:21:23] apptainer works
[2026-01-10 15:21:23] Set ATHENA_PROC_NUMBER=3
[2026-01-10 15:21:23] Set ATHENA_CORE_NUMBER=3
[2026-01-10 15:21:23] Starting ATLAS job with PandaID=6962018171
[2026-01-10 15:21:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:13:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:13:43] 2026-01-10 16:13:01,497 | INFO     | did not find any defunct processes belonging to 3718103
[2026-01-10 17:13:43] 2026-01-10 16:13:01,497 | INFO     | ready for new job
[2026-01-10 17:13:43] 2026-01-10 16:13:01,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:13:43] 2026-01-10 16:13:01,498 | INFO     | ***************************************
[2026-01-10 17:13:43] 2026-01-10 16:13:01,498 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:13:43] 2026-01-10 16:13:01,498 | INFO     | ***************************************
[2026-01-10 17:13:43] 2026-01-10 16:13:01,498 | INFO     | 
[2026-01-10 17:13:43] 2026-01-10 16:13:01,498 | INFO     | architecture information:
[2026-01-10 17:13:43] 2026-01-10 16:13:01,498 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:13:43] 2026-01-10 16:13:01,507 | INFO     | cat /etc/os-release:
[2026-01-10 17:13:43] NAME="CentOS Linux"
[2026-01-10 17:13:43] VERSION="7 (Core)"
[2026-01-10 17:13:43] ID="centos"
[2026-01-10 17:13:43] ID_LIKE="rhel fedora"
[2026-01-10 17:13:43] VERSION_ID="7"
[2026-01-10 17:13:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:13:43] ANSI_COLOR="0;31"
[2026-01-10 17:13:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:13:43] HOME_URL="https://www.centos.org/"
[2026-01-10 17:13:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:13:43] 
[2026-01-10 17:13:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:13:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:13:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:13:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:13:43] 
[2026-01-10 17:13:43] 2026-01-10 16:13:01,507 | INFO     | ***************************************
[2026-01-10 17:13:43] 2026-01-10 16:13:02,011 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 17:13:43] 2026-01-10 16:13:02,024 | INFO     | sufficient remaining disk space (384248578048 B)
[2026-01-10 17:13:43] 2026-01-10 16:13:02,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:13:43] 2026-01-10 16:13:02,025 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:13:43] 2026-01-10 16:13:02,025 | INFO     | update_server=False
[2026-01-10 17:13:43] 2026-01-10 16:13:02,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:13:43] 2026-01-10 16:13:02,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:13:43] 2026-01-10 16:13:02,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:13:43] 2026-01-10 16:13:02,104 | INFO     | all job control threads have been joined
[2026-01-10 17:13:43] 2026-01-10 16:13:02,295 | INFO     | all data control threads have been joined
[2026-01-10 17:13:43] 2026-01-10 16:13:02,507 | INFO     | all payload control threads have been joined
[2026-01-10 17:13:43] 2026-01-10 16:13:02,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:13:43] 2026-01-10 16:13:02,686 | INFO     | aborting loop
[2026-01-10 17:13:43] 2026-01-10 16:13:03,030 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,031 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,110 | INFO     | [job] control thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,119 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,301 | INFO     | [data] control thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,322 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,432 | INFO     | [job] validate thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,503 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,507 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,512 | INFO     | [payload] control thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,691 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:03,722 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:04,079 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:04,350 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:04,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:13:43] 2026-01-10 16:13:08,610 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:12,965 | INFO     | job.realtimelogging is not enabled
[2026-01-10 17:13:43] 2026-01-10 16:13:13,971 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:13:43] 2026-01-10 16:13:32,280 | INFO     | PID=3711653 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:13:43] 2026-01-10 16:13:32,281 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:13:43] 2026-01-10 16:13:32,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:13:43] 2026-01-10 16:13:32,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:13:43] 2026-01-10 16:13:38,030 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:13:43] 2026-01-10 16:13:38,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589752870720)>', '<ExcThread(monitor, started 140589395842816)>']
[2026-01-10 17:13:43] 2026-01-10 16:13:39,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:13:43] 2026-01-10 16:13:39,315 | INFO     | [monitor] control thread has ended
[2026-01-10 17:13:43] 2026-01-10 16:13:43,853 | INFO     | all workflow threads have been joined
[2026-01-10 17:13:43] 2026-01-10 16:13:43,853 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:13:43] 2026-01-10 16:13:43,853 | INFO     | traces error code: 0
[2026-01-10 17:13:43] 2026-01-10 16:13:43,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:13:43] 2026-01-10 16:13:43,914 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:13:43] 2026-01-10 16:13:43,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:13:43] 2026-01-10 16:13:43,919 [wrapper] pilotpid: 3711653
[2026-01-10 17:13:43] 2026-01-10 16:13:43,921 [wrapper] Pilot exit status: 0
[2026-01-10 17:13:43] 2026-01-10 16:13:43,929 [wrapper] pandaids: 6962018171
[2026-01-10 17:13:43] 2026-01-10 16:13:43,947 [wrapper] cleanup supervisor_pilot 3732468 3711654
[2026-01-10 17:13:43] 2026-01-10 16:13:43,950 [wrapper] Test setup, not cleaning
[2026-01-10 17:13:43] 2026-01-10 16:13:43,952 [wrapper] apfmon messages muted
[2026-01-10 17:13:43] 2026-01-10 16:13:43,955 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:13:43] 2026-01-10 16:13:43,957 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:13:43]  *** Error codes and diagnostics ***
[2026-01-10 17:13:44]     "exeErrorCode": 0,
[2026-01-10 17:13:44]     "exeErrorDiag": "",
[2026-01-10 17:13:44]     "pilotErrorCode": 0,
[2026-01-10 17:13:44]     "pilotErrorDiag": "",
[2026-01-10 17:13:44]  *** Listing of results directory ***
[2026-01-10 17:13:44] total 445844
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-10 17:13:44] -rwx------ 1 boinc boinc     36322 Jan  7 16:35 runpilot2-wrapper.sh
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:38 queuedata.json
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc       100 Jan 10 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:13:44] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 15:21 run_atlas
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc       105 Jan 10 15:21 job.xml
[2026-01-10 17:13:44] -rw-r--r-- 2 boinc boinc 228072153 Jan 10 15:21 EVNT.47898824._000520.pool.root.1
[2026-01-10 17:13:44] -rw-r--r-- 2 boinc boinc    592394 Jan 10 15:21 input.tar.gz
[2026-01-10 17:13:44] -rw-r--r-- 2 boinc boinc     15847 Jan 10 15:21 start_atlas.sh
[2026-01-10 17:13:44] drwxrwx--x 2 boinc boinc      4096 Jan 10 15:21 shared
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc         0 Jan 10 15:21 boinc_setup_complete
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc      6450 Jan 10 15:21 init_data.xml
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc         0 Jan 10 15:21 boinc_lockfile
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc      2516 Jan 10 15:21 pandaJob.out
[2026-01-10 17:13:44] -rw------- 1 boinc boinc    989556 Jan 10 15:21 agis_schedconf.cvmfs.json
[2026-01-10 17:13:44] -rw------- 1 boinc boinc   1516240 Jan 10 15:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:13:44] drwx------ 5 boinc boinc      4096 Jan 10 15:21 pilot3
[2026-01-10 17:13:44] -rw------- 1 boinc boinc 222088187 Jan 10 17:12 HITS.47898826._010288.pool.root.1
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc       529 Jan 10 17:12 boinc_task_state.xml
[2026-01-10 17:13:44] -rw------- 1 boinc boinc      1012 Jan 10 17:12 memory_monitor_summary.json
[2026-01-10 17:13:44] -rw------- 1 boinc boinc    272372 Jan 10 17:12 log.47898826._010288.job.log.tgz.1
[2026-01-10 17:13:44] -rw------- 1 boinc boinc      7745 Jan 10 17:13 heartbeat.json
[2026-01-10 17:13:44] -rw------- 1 boinc boinc        95 Jan 10 17:13 pilot_heartbeat.json
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:13 boinc_mmap_file
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc        27 Jan 10 17:13 wrapper_checkpoint.txt
[2026-01-10 17:13:44] -rw------- 1 boinc boinc      4824 Jan 10 17:13 pilotlog.txt
[2026-01-10 17:13:44] -rw------- 1 boinc boinc    967095 Jan 10 17:13 log.47898826._010288.job.log.1
[2026-01-10 17:13:44] -rw------- 1 boinc boinc       357 Jan 10 17:13 output.list
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:13 runtime_log
[2026-01-10 17:13:44] -rw------- 1 boinc boinc   1259520 Jan 10 17:13 result.tar.gz
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc      8917 Jan 10 17:13 runtime_log.err
[2026-01-10 17:13:44] -rw------- 1 boinc boinc       663 Jan 10 17:13 033KDmIkkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtPiKDmGdB3tm.diag
[2026-01-10 17:13:44] -rw-r--r-- 1 boinc boinc      9739 Jan 10 17:13 stderr.txt
[2026-01-10 17:13:44] HITS file was successfully produced:
[2026-01-10 17:13:44] -rw------- 1 boinc boinc 222088187 Jan 10 17:12 shared/HITS.pool.root.1
[2026-01-10 17:13:44]  *** Contents of shared directory: ***
[2026-01-10 17:13:44] total 441448
[2026-01-10 17:13:44] -rw-r--r-- 2 boinc boinc 228072153 Jan 10 15:21 ATLAS.root_0
[2026-01-10 17:13:44] -rw-r--r-- 2 boinc boinc    592394 Jan 10 15:21 input.tar.gz
[2026-01-10 17:13:44] -rw-r--r-- 2 boinc boinc     15847 Jan 10 15:21 start_atlas.sh
[2026-01-10 17:13:44] -rw------- 1 boinc boinc 222088187 Jan 10 17:12 HITS.pool.root.1
[2026-01-10 17:13:44] -rw------- 1 boinc boinc   1259520 Jan 10 17:13 result.tar.gz
17:13:45 (3707933): run_atlas exited; CPU time 19358.488284
17:13:45 (3707933): called boinc_finish(0)

</stderr_txt>
]]>

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