Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:22:27 (2859071): wrapper (7.7.26015): starting
21:22:27 (2859071): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:22:27] Arguments: --nthreads 8
[2026-01-09 21:22:27] Threads: 8
[2026-01-09 21:22:27] Checking for CVMFS
[2026-01-09 21:22:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:22:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:22:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:22:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:22:28] 2.13.3.0 11793 94245 385356 154964 1 299 31913222 32935937 27999 16776704 0 355018857 99.507 464963119 34930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:22:28] CVMFS is ok
[2026-01-09 21:22:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:22:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:22:28] Further information can be found at the LHC@home message board.
[2026-01-09 21:22:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:22:28] Checking for apptainer binary...
[2026-01-09 21:22:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:22:28] Running /usr/bin/apptainer --version
[2026-01-09 21:22:28] apptainer version 1.4.5-2.el9
[2026-01-09 21:22:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:22:49] c6-2-11-2.aglt2.org
[2026-01-09 21:22:49] apptainer works
[2026-01-09 21:22:49] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:22:49] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:22:49] Starting ATLAS job with PandaID=6963168850
[2026-01-09 21:22:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:04:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:04:29] 2026-01-10 05:03:42,847 | INFO     | time since job start (9636s) is within the limit (349056.0s)
[2026-01-10 00:04:29] 2026-01-10 05:03:43,810 | INFO     | monitor loop #639: job 0:6963168850 is in state 'finished'
[2026-01-10 00:04:29] 2026-01-10 05:03:43,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:04:29] 2026-01-10 05:03:44,858 | INFO     | time since job start (9638s) is within the limit (349056.0s)
[2026-01-10 00:04:29] 2026-01-10 05:03:44,858 | INFO     | 9641s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 00:04:29] 2026-01-10 05:03:46,315 | INFO     | monitor loop #640: job 0:6963168850 is in state 'finished'
[2026-01-10 00:04:29] 2026-01-10 05:03:46,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:04:29] 2026-01-10 05:03:46,865 | INFO     | time since job start (9640s) is within the limit (349056.0s)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,730 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 00:04:29] 2026-01-10 05:03:47,758 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2761.8605833333327
[2026-01-10 00:04:29] 2026-01-10 05:03:47,775 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963168850/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,775 | INFO     | extracted standard info from prmon json
[2026-01-10 00:04:29] 2026-01-10 05:03:47,776 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:04:29] 2026-01-10 05:03:47,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:04:29] 2026-01-10 05:03:47,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:04:29] 2026-01-10 05:03:47,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:04:29] 2026-01-10 05:03:47,779 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:04:29] 2026-01-10 05:03:47,779 | INFO     | sum of square deviations: 1199934183.3630538
[2026-01-10 00:04:29] 2026-01-10 05:03:47,780 | INFO     | sum of deviations: -28892634583.87898
[2026-01-10 00:04:29] 2026-01-10 05:03:47,780 | INFO     | mean x: 1768016587.0636942
[2026-01-10 00:04:29] 2026-01-10 05:03:47,780 | INFO     | mean y: 2588199.687898089
[2026-01-10 00:04:29] 2026-01-10 05:03:47,780 | INFO     | intersect: 42573804101.79586
[2026-01-10 00:04:29] 2026-01-10 05:03:47,781 | INFO     | chi2: 1.7402053469502876
[2026-01-10 00:04:29] 2026-01-10 05:03:47,781 | INFO     | sum of square deviations: 1088902593.3421052
[2026-01-10 00:04:29] 2026-01-10 05:03:47,782 | INFO     | sum of deviations: -27138248423.921032
[2026-01-10 00:04:29] 2026-01-10 05:03:47,782 | INFO     | mean x: 1768016434.5657895
[2026-01-10 00:04:29] 2026-01-10 05:03:47,782 | INFO     | mean y: 2590610.0921052634
[2026-01-10 00:04:29] 2026-01-10 05:03:47,782 | INFO     | intersect: 44066099607.30795
[2026-01-10 00:04:29] 2026-01-10 05:03:47,782 | INFO     | chi2: 1.7359516366434802
[2026-01-10 00:04:29] 2026-01-10 05:03:47,782 | INFO     | current chi2=1.7359516366434802 (change=0.2444372622036858 %)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,783 | INFO     | right removable region: 151
[2026-01-10 00:04:29] 2026-01-10 05:03:47,783 | INFO     | sum of square deviations: 1088896493.3421052
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | sum of deviations: -51275819495.68424
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | mean x: 1768016739.5657895
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | mean y: 2618440.8684210526
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | intersect: 83258013014.75975
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | chi2: 0.3041100449757413
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | current chi2=0.3041100449757413 (change=82.52447359107965 %)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,784 | INFO     | sum of square deviations: 984928703.3197275
[2026-01-10 00:04:29] 2026-01-10 05:03:47,785 | INFO     | sum of deviations: -48888625547.86393
[2026-01-10 00:04:29] 2026-01-10 05:03:47,785 | INFO     | mean x: 1768016892.0680273
[2026-01-10 00:04:29] 2026-01-10 05:03:47,785 | INFO     | mean y: 2614853.9863945576
[2026-01-10 00:04:29] 2026-01-10 05:03:47,785 | INFO     | intersect: 87761165810.29161
[2026-01-10 00:04:29] 2026-01-10 05:03:47,786 | INFO     | chi2: 0.282289794255281
[2026-01-10 00:04:29] 2026-01-10 05:03:47,786 | INFO     | current chi2=0.282289794255281 (change=7.175116731905676 %)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,786 | INFO     | left removable region: 20
[2026-01-10 00:04:29] 2026-01-10 05:03:47,786 | INFO     | sum of square deviations: 697048230.3816772
[2026-01-10 00:04:29] 2026-01-10 05:03:47,787 | INFO     | sum of deviations: -34508718966.129776
[2026-01-10 00:04:29] 2026-01-10 05:03:47,787 | INFO     | mean x: 1768017014.0687022
[2026-01-10 00:04:29] 2026-01-10 05:03:47,787 | INFO     | mean y: 2598315.236641221
[2026-01-10 00:04:29] 2026-01-10 05:03:47,787 | INFO     | intersect: 87531695451.63553
[2026-01-10 00:04:29] 2026-01-10 05:03:47,787 | INFO     | chi2: 0.26232462727572653
[2026-01-10 00:04:29] 2026-01-10 05:03:47,787 | INFO     | current memory leak: -49.51 B/s (using 131 data points, chi2=0.26)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | could have reported an average CPU frequency of 2756 MHz (9 samples)
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | ..............................
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . Timing measurements:
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . get job = 0 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . initial setup = 3 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . payload setup = 10 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . stage-in = 0 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . payload execution = 9581 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . stage-out = 1 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,788 | INFO     | . log creation = 0 s
[2026-01-10 00:04:29] 2026-01-10 05:03:47,789 | INFO     | ..............................
[2026-01-10 00:04:29] 2026-01-10 05:03:48,312 | INFO     | 
[2026-01-10 00:04:29] 2026-01-10 05:03:48,312 | INFO     | job summary report
[2026-01-10 00:04:29] 2026-01-10 05:03:48,312 | INFO     | --------------------------------------------------
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | PanDA job id: 6963168850
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | task id: 47898826
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | errors: (none)
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | pilot state: finished 
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | transexitcode: 0
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | exeerrorcode: 0
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | exeerrordiag: 
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | exitcode: 0
[2026-01-10 00:04:29] 2026-01-10 05:03:48,313 | INFO     | exitmsg: OK
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | cpuconsumptiontime: 55747 s
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | nevents: 400
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | neventsw: 0
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | pid: 2883020
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | pgrp: 2883020
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | corecount: 8
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | event service: False
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | sizes: {0: 2283971, 1: 2283971, 10: 2284261, 12: 2284289, 9596: 2313018, 9597: 2313017, 9599: 2322199, 9603: 2322255, 9619: 2322513}
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | --------------------------------------------------
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | 
[2026-01-10 00:04:29] 2026-01-10 05:03:48,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 00:04:29] 2026-01-10 05:03:48,439 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:04:29] 2026-01-10 05:03:48,441 | INFO     | job 6963168850 has completed (purged errors)
[2026-01-10 00:04:29] 2026-01-10 05:03:48,442 | INFO     | overall cleanup function is called
[2026-01-10 00:04:29] 2026-01-10 05:03:49,450 | INFO     | --- collectZombieJob: --- 10, [2883020]
[2026-01-10 00:04:29] 2026-01-10 05:03:49,450 | INFO     | zombie collector waiting for pid 2883020
[2026-01-10 00:04:29] 2026-01-10 05:03:49,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:04:29] 2026-01-10 05:03:49,451 | INFO     | collected zombie processes
[2026-01-10 00:04:29] 2026-01-10 05:03:49,451 | INFO     | will attempt to kill all subprocesses of pid=2883020
[2026-01-10 00:04:29] 2026-01-10 05:03:50,008 | INFO     | process IDs to be killed: [2883020] (in reverse order)
[2026-01-10 00:04:29] 2026-01-10 05:03:50,203 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:04:29] 2026-01-10 05:03:50,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:04:29] 2026-01-10 05:03:50,234 | INFO     | did not find any defunct processes belonging to 2883020
[2026-01-10 00:04:29] 2026-01-10 05:03:50,251 | INFO     | did not find any defunct processes belonging to 2883020
[2026-01-10 00:04:29] 2026-01-10 05:03:50,251 | INFO     | ready for new job
[2026-01-10 00:04:29] 2026-01-10 05:03:50,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:04:29] 2026-01-10 05:03:50,253 | INFO     | ***************************************
[2026-01-10 00:04:29] 2026-01-10 05:03:50,253 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:04:29] 2026-01-10 05:03:50,254 | INFO     | ***************************************
[2026-01-10 00:04:29] 2026-01-10 05:03:50,254 | INFO     | 
[2026-01-10 00:04:29] 2026-01-10 05:03:50,262 | INFO     | architecture information:
[2026-01-10 00:04:29] 2026-01-10 05:03:50,262 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:04:29] 2026-01-10 05:03:50,291 | INFO     | cat /etc/os-release:
[2026-01-10 00:04:29] NAME="CentOS Linux"
[2026-01-10 00:04:29] VERSION="7 (Core)"
[2026-01-10 00:04:29] ID="centos"
[2026-01-10 00:04:29] ID_LIKE="rhel fedora"
[2026-01-10 00:04:29] VERSION_ID="7"
[2026-01-10 00:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:04:29] ANSI_COLOR="0;31"
[2026-01-10 00:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:04:29] HOME_URL="https://www.centos.org/"
[2026-01-10 00:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:04:29] 
[2026-01-10 00:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:04:29] 
[2026-01-10 00:04:29] 2026-01-10 05:03:50,291 | INFO     | ***************************************
[2026-01-10 00:04:29] 2026-01-10 05:03:50,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 00:04:29] 2026-01-10 05:03:50,820 | INFO     | sufficient remaining disk space (93406101504 B)
[2026-01-10 00:04:29] 2026-01-10 05:03:50,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:04:29] 2026-01-10 05:03:50,820 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:04:29] 2026-01-10 05:03:50,820 | INFO     | update_server=False
[2026-01-10 00:04:29] 2026-01-10 05:03:50,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:04:29] 2026-01-10 05:03:50,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:04:29] 2026-01-10 05:03:50,821 | INFO     | aborting loop
[2026-01-10 00:04:29] 2026-01-10 05:03:50,920 | INFO     | all payload control threads have been joined
[2026-01-10 00:04:29] 2026-01-10 05:03:51,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:04:29] 2026-01-10 05:03:51,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:04:29] 2026-01-10 05:03:51,826 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:51,827 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:51,852 | INFO     | all data control threads have been joined
[2026-01-10 00:04:29] 2026-01-10 05:03:51,926 | INFO     | [payload] control thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:52,020 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:52,133 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:52,295 | INFO     | all job control threads have been joined
[2026-01-10 00:04:29] 2026-01-10 05:03:52,571 | INFO     | [job] validate thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:52,591 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:52,844 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:52,858 | INFO     | [data] control thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:53,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:04:29] 2026-01-10 05:03:53,197 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:53,236 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:53,302 | INFO     | [job] control thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:53,534 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:54,044 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:03:55,463 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:04:01,602 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:04:29] 2026-01-10 05:04:02,608 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:04:29] 2026-01-10 05:04:20,600 | INFO     | PID=2865642 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:04:29] 2026-01-10 05:04:20,600 | INFO     | .. there are 29 such processes running
[2026-01-10 00:04:29] 2026-01-10 05:04:20,606 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:04:29] 2026-01-10 05:04:20,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:04:29] 2026-01-10 05:04:20,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:04:29] 2026-01-10 05:04:22,507 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:04:29] 2026-01-10 05:04:22,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468096223040)>', '<ExcThread(monitor, started 140467299673856)>']
[2026-01-10 00:04:29] 2026-01-10 05:04:23,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:04:29] 2026-01-10 05:04:23,624 | INFO     | [monitor] control thread has ended
[2026-01-10 00:04:29] 2026-01-10 05:04:27,901 | INFO     | all workflow threads have been joined
[2026-01-10 00:04:29] 2026-01-10 05:04:27,901 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:04:29] 2026-01-10 05:04:27,902 | INFO     | traces error code: 0
[2026-01-10 00:04:29] 2026-01-10 05:04:27,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:04:29] 2026-01-10 05:04:28,121 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:04:29] 2026-01-10 05:04:28,135 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:04:29] 2026-01-10 05:04:28,151 [wrapper] pilotpid: 2865642
[2026-01-10 00:04:29] 2026-01-10 05:04:28,167 [wrapper] Pilot exit status: 0
[2026-01-10 00:04:29] 2026-01-10 05:04:28,281 [wrapper] pandaids: 6963168850
[2026-01-10 00:04:29] 2026-01-10 05:04:28,366 [wrapper] cleanup supervisor_pilot 3353818 2865643
[2026-01-10 00:04:29] 2026-01-10 05:04:28,368 [wrapper] Test setup, not cleaning
[2026-01-10 00:04:29] 2026-01-10 05:04:28,371 [wrapper] apfmon messages muted
[2026-01-10 00:04:29] 2026-01-10 05:04:28,373 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:04:29] 2026-01-10 05:04:28,375 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:04:29]  *** Error codes and diagnostics ***
[2026-01-10 00:04:29]     "exeErrorCode": 0,
[2026-01-10 00:04:29]     "exeErrorDiag": "",
[2026-01-10 00:04:29]     "pilotErrorCode": 0,
[2026-01-10 00:04:29]     "pilotErrorDiag": "",
[2026-01-10 00:04:29]  *** Listing of results directory ***
[2026-01-10 00:04:29] total 435336
[2026-01-10 00:04:29] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:04:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:22 run_atlas
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:22 job.xml
[2026-01-10 00:04:29] -rw-r--r--. 2 boincer umatlas 222751606 Jan  9 21:22 EVNT.47898824._001394.pool.root.1
[2026-01-10 00:04:29] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 21:22 input.tar.gz
[2026-01-10 00:04:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:22 start_atlas.sh
[2026-01-10 00:04:29] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:22 shared
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:22 boinc_lockfile
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 21:22 pandaJob.out
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas        57 Jan  9 21:22 setup.sh.local
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas    989382 Jan  9 21:23 agis_schedconf.cvmfs.json
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:04:29] drwx------. 5 boincer umatlas      4096 Jan  9 21:23 pilot3
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas      6878 Jan 10 00:01 init_data.xml
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas 215732863 Jan 10 00:02 HITS.47898826._036377.pool.root.1
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas       529 Jan 10 00:02 boinc_task_state.xml
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas      1041 Jan 10 00:03 memory_monitor_summary.json
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas    384470 Jan 10 00:03 log.47898826._036377.job.log.tgz.1
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas      7830 Jan 10 00:03 heartbeat.json
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas        27 Jan 10 00:03 wrapper_checkpoint.txt
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:03 boinc_mmap_file
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas        95 Jan 10 00:04 pilot_heartbeat.json
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas      4896 Jan 10 00:04 pilotlog.txt
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas   1308291 Jan 10 00:04 log.47898826._036377.job.log.1
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas       357 Jan 10 00:04 output.list
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:04 runtime_log
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas   1710080 Jan 10 00:04 result.tar.gz
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas      9347 Jan 10 00:04 runtime_log.err
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas       654 Jan 10 00:04 1j5MDmZ3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmangKDmSmquen.diag
[2026-01-10 00:04:29] -rw-r--r--. 1 boincer umatlas     21399 Jan 10 00:04 stderr.txt
[2026-01-10 00:04:29] HITS file was successfully produced:
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas 215732863 Jan 10 00:02 shared/HITS.pool.root.1
[2026-01-10 00:04:29]  *** Contents of shared directory: ***
[2026-01-10 00:04:29] total 430484
[2026-01-10 00:04:29] -rw-r--r--. 2 boincer umatlas 222751606 Jan  9 21:22 ATLAS.root_0
[2026-01-10 00:04:29] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 21:22 input.tar.gz
[2026-01-10 00:04:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:22 start_atlas.sh
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas 215732863 Jan 10 00:02 HITS.pool.root.1
[2026-01-10 00:04:29] -rw-------. 1 boincer umatlas   1710080 Jan 10 00:04 result.tar.gz
00:04:30 (2859071): run_atlas exited; CPU time 56194.886682
00:04:30 (2859071): called boinc_finish(0)

</stderr_txt>
]]>

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