Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:28:11 (13072): wrapper (7.7.26015): starting
07:28:11 (13072): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 07:28:11] Arguments: --nthreads 8
[2026-01-10 07:28:11] Threads: 8
[2026-01-10 07:28:11] Checking for CVMFS
[2026-01-10 07:28:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:28:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:28:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:28:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:28:14] 2.11.2.0 18312 36494 123640 154970 1 60 24154350 25165825 899 130560 0 15735671 99.839 10103258 3451 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 07:28:14] CVMFS is ok
[2026-01-10 07:28:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:28:14] Checking for apptainer binary...
[2026-01-10 07:28:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:28:14] Running /usr/bin/apptainer --version
[2026-01-10 07:28:15] apptainer version 1.3.2-1.el7
[2026-01-10 07:28:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:28:28] cg-vwn442.simple-grid.lan
[2026-01-10 07:28:28] apptainer works
[2026-01-10 07:28:29] Set ATHENA_PROC_NUMBER=8
[2026-01-10 07:28:29] Set ATHENA_CORE_NUMBER=8
[2026-01-10 07:28:29] Starting ATLAS job with PandaID=6963381510
[2026-01-10 07:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 09:09:45]  *** The last 200 lines of the pilot log: ***
[2026-01-11 09:09:45] 2026-01-11 08:08:29,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:09:45] 2026-01-11 08:08:31,262 | INFO     | time since job start (92139s) is within the limit (349056.0s)
[2026-01-11 09:09:45] 2026-01-11 08:08:32,325 | INFO     | monitor loop #6234: job 0:6963381510 is in state 'finished'
[2026-01-11 09:09:45] 2026-01-11 08:08:32,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:09:45] 2026-01-11 08:08:33,273 | INFO     | time since job start (92141s) is within the limit (349056.0s)
[2026-01-11 09:09:45] 2026-01-11 08:08:34,834 | INFO     | monitor loop #6235: job 0:6963381510 is in state 'finished'
[2026-01-11 09:09:45] 2026-01-11 08:08:34,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:09:45] 2026-01-11 08:08:35,286 | INFO     | time since job start (92143s) is within the limit (349056.0s)
[2026-01-11 09:09:45] 2026-01-11 08:08:37,293 | INFO     | time since job start (92145s) is within the limit (349056.0s)
[2026-01-11 09:09:45] 2026-01-11 08:08:37,339 | INFO     | monitor loop #6236: job 0:6963381510 is in state 'finished'
[2026-01-11 09:09:45] 2026-01-11 08:08:37,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:09:45] 2026-01-11 08:08:39,299 | INFO     | time since job start (92147s) is within the limit (349056.0s)
[2026-01-11 09:09:45] 2026-01-11 08:08:39,843 | INFO     | monitor loop #6237: job 0:6963381510 is in state 'finished'
[2026-01-11 09:09:45] 2026-01-11 08:08:39,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:09:45] 2026-01-11 08:08:40,370 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 09:09:45] 2026-01-11 08:08:40,371 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 09:09:45] 2026-01-11 08:08:40,373 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963381510/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 09:09:45] 2026-01-11 08:08:40,374 | INFO     | extracted standard info from prmon json
[2026-01-11 09:09:45] 2026-01-11 08:08:40,374 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 09:09:45] 2026-01-11 08:08:40,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 09:09:45] 2026-01-11 08:08:40,417 | INFO     | fitting pss+swap vs Time
[2026-01-11 09:09:45] 2026-01-11 08:08:40,420 | INFO     | sum of square deviations: 1044437569675.5254
[2026-01-11 09:09:45] 2026-01-11 08:08:40,561 | INFO     | sum of deviations: 5055239252726.717
[2026-01-11 09:09:45] 2026-01-11 08:08:40,562 | INFO     | mean x: 1768073066.0313542
[2026-01-11 09:09:45] 2026-01-11 08:08:40,562 | INFO     | mean y: 2775957.835890594
[2026-01-11 09:09:45] 2026-01-11 08:08:40,562 | INFO     | intersect: -8554970933.505207
[2026-01-11 09:09:45] 2026-01-11 08:08:40,564 | INFO     | chi2: 41.33983685847928
[2026-01-11 09:09:45] 2026-01-11 08:08:40,566 | INFO     | sum of square deviations: 1034021501707.6898
[2026-01-11 09:09:45] 2026-01-11 08:08:40,690 | INFO     | sum of deviations: 5538554719970.296
[2026-01-11 09:09:45] 2026-01-11 08:08:40,691 | INFO     | mean x: 1768072913.5348058
[2026-01-11 09:09:45] 2026-01-11 08:08:40,691 | INFO     | mean y: 2783033.3212851407
[2026-01-11 09:09:45] 2026-01-11 08:08:40,691 | INFO     | intersect: -9467589260.03758
[2026-01-11 09:09:45] 2026-01-11 08:08:40,693 | INFO     | chi2: 38.1146414756018
[2026-01-11 09:09:45] 2026-01-11 08:08:40,693 | INFO     | current chi2=38.1146414756018 (change=7.801664515315945 %)
[2026-01-11 09:09:45] 2026-01-11 08:08:40,693 | INFO     | right removable region: 1493
[2026-01-11 09:09:45] 2026-01-11 08:08:40,695 | INFO     | sum of square deviations: 1034020558647.6893
[2026-01-11 09:09:45] 2026-01-11 08:08:40,805 | INFO     | sum of deviations: 4423230589715.588
[2026-01-11 09:09:45] 2026-01-11 08:08:40,805 | INFO     | mean x: 1768073218.5348058
[2026-01-11 09:09:45] 2026-01-11 08:08:40,805 | INFO     | mean y: 2785210.3159303884
[2026-01-11 09:09:45] 2026-01-11 08:08:40,805 | INFO     | intersect: -7560503043.167116
[2026-01-11 09:09:45] 2026-01-11 08:08:40,807 | INFO     | chi2: 36.12588160624099
[2026-01-11 09:09:45] 2026-01-11 08:08:40,807 | INFO     | current chi2=36.12588160624099 (change=12.612423387367214 %)
[2026-01-11 09:09:45] 2026-01-11 08:08:40,808 | INFO     | left removable region: 10
[2026-01-11 09:09:45] 2026-01-11 08:08:40,817 | INFO     | sum of square deviations: 1011348542266.3242
[2026-01-11 09:09:45] 2026-01-11 08:08:40,905 | INFO     | sum of deviations: 4424975086212.646
[2026-01-11 09:09:45] 2026-01-11 08:08:40,906 | INFO     | mean x: 1768073188.0424814
[2026-01-11 09:09:45] 2026-01-11 08:08:40,906 | INFO     | mean y: 2802609.116655428
[2026-01-11 09:09:45] 2026-01-11 08:08:40,906 | INFO     | intersect: -7733086138.155889
[2026-01-11 09:09:45] 2026-01-11 08:08:40,908 | INFO     | chi2: 27.722359049566364
[2026-01-11 09:09:45] 2026-01-11 08:08:40,908 | INFO     | current memory leak: 4.38 B/s (using 1483 data points, chi2=27.72)
[2026-01-11 09:09:45] 2026-01-11 08:08:40,910 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2026-01-11 09:09:45] 2026-01-11 08:08:40,910 | INFO     | ..............................
[2026-01-11 09:09:45] 2026-01-11 08:08:40,910 | INFO     | . Timing measurements:
[2026-01-11 09:09:45] 2026-01-11 08:08:40,910 | INFO     | . get job = 0 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,910 | INFO     | . initial setup = 8 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,910 | INFO     | . payload setup = 209 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,911 | INFO     | . stage-in = 0 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,911 | INFO     | . payload execution = 91590 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,911 | INFO     | . stage-out = 9 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,911 | INFO     | . log creation = 2 s
[2026-01-11 09:09:45] 2026-01-11 08:08:40,911 | INFO     | ..............................
[2026-01-11 09:09:45] 2026-01-11 08:08:41,306 | INFO     | time since job start (92149s) is within the limit (349056.0s)
[2026-01-11 09:09:45] 2026-01-11 08:08:41,363 | INFO     | 
[2026-01-11 09:09:45] 2026-01-11 08:08:41,363 | INFO     | job summary report
[2026-01-11 09:09:45] 2026-01-11 08:08:41,363 | INFO     | --------------------------------------------------
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | PanDA job id: 6963381510
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | task id: 47962010
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | errors: (none)
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | pilot state: finished 
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | transexitcode: 0
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | exeerrorcode: 0
[2026-01-11 09:09:45] 2026-01-11 08:08:41,364 | INFO     | exeerrordiag: 
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | exitcode: 0
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | exitmsg: OK
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | cpuconsumptiontime: 355897 s
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | nevents: 900
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | neventsw: 0
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | pid: 23301
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | pgrp: 23301
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | corecount: 8
[2026-01-11 09:09:45] 2026-01-11 08:08:41,365 | INFO     | event service: False
[2026-01-11 09:09:45] 2026-01-11 08:08:41,366 | INFO     | sizes: {0: 2284395, 1: 2284479, 2: 2284650, 12: 2284678, 23: 2284706, 34: 2284734, 45: 2284890, 55: 2284918, 66: 2284946, 77: 2284974, 87: 2285030, 98: 2285338, 10
[2026-01-11 09:09:45] 2026-01-11 08:08:41,366 | INFO     | --------------------------------------------------
[2026-01-11 09:09:45] 2026-01-11 08:08:41,366 | INFO     | 
[2026-01-11 09:09:45] 2026-01-11 08:08:41,366 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-11 09:09:45] 2026-01-11 08:08:41,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,861 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,861 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,861 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 09:09:45] 2026-01-11 08:08:41,863 | INFO     | job 6963381510 has completed (purged errors)
[2026-01-11 09:09:45] 2026-01-11 08:08:41,864 | INFO     | overall cleanup function is called
[2026-01-11 09:09:45] 2026-01-11 08:08:42,891 | INFO     | --- collectZombieJob: --- 10, [23301]
[2026-01-11 09:09:45] 2026-01-11 08:08:42,891 | INFO     | zombie collector waiting for pid 23301
[2026-01-11 09:09:45] 2026-01-11 08:08:42,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 09:09:45] 2026-01-11 08:08:42,892 | INFO     | collected zombie processes
[2026-01-11 09:09:45] 2026-01-11 08:08:42,892 | INFO     | will attempt to kill all subprocesses of pid=23301
[2026-01-11 09:09:45] 2026-01-11 08:08:42,967 | INFO     | process IDs to be killed: [23301] (in reverse order)
[2026-01-11 09:09:45] 2026-01-11 08:08:43,773 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 09:09:45] 2026-01-11 08:08:43,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 09:09:45] 2026-01-11 08:08:43,775 | INFO     | did not find any defunct processes belonging to 23301
[2026-01-11 09:09:45] 2026-01-11 08:08:43,777 | INFO     | did not find any defunct processes belonging to 23301
[2026-01-11 09:09:45] 2026-01-11 08:08:43,777 | INFO     | ready for new job
[2026-01-11 09:09:45] 2026-01-11 08:08:43,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 09:09:45] 2026-01-11 08:08:43,783 | INFO     | ***************************************
[2026-01-11 09:09:45] 2026-01-11 08:08:43,784 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 09:09:45] 2026-01-11 08:08:43,784 | INFO     | ***************************************
[2026-01-11 09:09:45] 2026-01-11 08:08:43,784 | INFO     | 
[2026-01-11 09:09:45] 2026-01-11 08:08:43,785 | INFO     | pilot is running in a VM
[2026-01-11 09:09:45] 2026-01-11 08:08:43,785 | INFO     | architecture information:
[2026-01-11 09:09:45] 2026-01-11 08:08:43,792 | INFO     | executing command: cat /etc/os-release
[2026-01-11 09:09:45] 2026-01-11 08:08:44,084 | INFO     | cat /etc/os-release:
[2026-01-11 09:09:45] NAME="CentOS Linux"
[2026-01-11 09:09:45] VERSION="7 (Core)"
[2026-01-11 09:09:45] ID="centos"
[2026-01-11 09:09:45] ID_LIKE="rhel fedora"
[2026-01-11 09:09:45] VERSION_ID="7"
[2026-01-11 09:09:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 09:09:45] ANSI_COLOR="0;31"
[2026-01-11 09:09:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 09:09:45] HOME_URL="https://www.centos.org/"
[2026-01-11 09:09:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 09:09:45] 
[2026-01-11 09:09:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 09:09:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 09:09:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 09:09:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 09:09:45] 
[2026-01-11 09:09:45] 2026-01-11 08:08:44,085 | INFO     | ***************************************
[2026-01-11 09:09:45] 2026-01-11 08:08:44,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-11 09:09:45] 2026-01-11 08:08:44,872 | INFO     | sufficient remaining disk space (495736324096 B)
[2026-01-11 09:09:45] 2026-01-11 08:08:44,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 09:09:45] 2026-01-11 08:08:44,872 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 09:09:45] 2026-01-11 08:08:44,872 | INFO     | update_server=False
[2026-01-11 09:09:45] 2026-01-11 08:08:44,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 09:09:45] 2026-01-11 08:08:44,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 09:09:45] 2026-01-11 08:08:44,887 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 09:09:45] 2026-01-11 08:08:44,887 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 09:09:45] 2026-01-11 08:08:44,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:09:45] 2026-01-11 08:08:44,888 | INFO     | will abort loop
[2026-01-11 09:09:45] 2026-01-11 08:08:44,976 | INFO     | all job control threads have been joined
[2026-01-11 09:09:45] 2026-01-11 08:08:45,237 | INFO     | all data control threads have been joined
[2026-01-11 09:09:45] 2026-01-11 08:08:45,878 | INFO     | [job] retrieve thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:45,893 | INFO     | [job] job monitor thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:45,982 | INFO     | [job] control thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,053 | INFO     | [job] validate thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:09:45] 2026-01-11 08:08:46,108 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,213 | INFO     | all payload control threads have been joined
[2026-01-11 09:09:45] 2026-01-11 08:08:46,243 | INFO     | [data] control thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,250 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 09:09:45] 2026-01-11 08:08:46,733 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,802 | INFO     | [payload] failed_post thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,880 | INFO     | [data] copytool_out thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:46,989 | INFO     | [data] copytool_in thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:47,070 | INFO     | [job] queue monitor thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:47,219 | INFO     | [payload] control thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:47,246 | INFO     | [payload] validate_post thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:47,250 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:08:50,706 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 09:09:45] 2026-01-11 08:09:14,424 | INFO     | PID=16806 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 09:09:45] 2026-01-11 08:09:14,425 | INFO     | .. there are 2 such processes running
[2026-01-11 09:09:45] 2026-01-11 08:09:14,426 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 09:09:45] 2026-01-11 08:09:14,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 09:09:45] 2026-01-11 08:09:14,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 09:09:45] 2026-01-11 08:09:32,436 | INFO     | [monitor] cgroup control has ended
[2026-01-11 09:09:45] 2026-01-11 08:09:34,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983409788736)>', '<ExcThread(monitor, started 139982807213824)>']
[2026-01-11 09:09:45] 2026-01-11 08:09:34,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 09:09:45] 2026-01-11 08:09:34,545 | INFO     | [monitor] control thread has ended
[2026-01-11 09:09:45] 2026-01-11 08:09:39,424 | INFO     | all workflow threads have been joined
[2026-01-11 09:09:45] 2026-01-11 08:09:39,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 09:09:45] 2026-01-11 08:09:39,425 | INFO     | traces error code: 0
[2026-01-11 09:09:45] 2026-01-11 08:09:39,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 09:09:45] 2026-01-11 08:09:39,797 [wrapper] ==== pilot stdout END ====
[2026-01-11 09:09:45] 2026-01-11 08:09:39,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 09:09:45] 2026-01-11 08:09:40,009 [wrapper] pilotpid: 16806
[2026-01-11 09:09:45] 2026-01-11 08:09:40,077 [wrapper] Pilot exit status: 0
[2026-01-11 09:09:45] 2026-01-11 08:09:40,536 [wrapper] pandaids: 6963381510
[2026-01-11 09:09:45] 2026-01-11 08:09:41,509 [wrapper] cleanup supervisor_pilot 17821 16807
[2026-01-11 09:09:45] 2026-01-11 08:09:41,587 [wrapper] Test setup, not cleaning
[2026-01-11 09:09:45] 2026-01-11 08:09:41,656 [wrapper] apfmon messages muted
[2026-01-11 09:09:45] 2026-01-11 08:09:41,715 [wrapper] ==== wrapper stdout END ====
[2026-01-11 09:09:45] 2026-01-11 08:09:41,795 [wrapper] ==== wrapper stderr END ====
[2026-01-11 09:09:45]  *** Error codes and diagnostics ***
[2026-01-11 09:09:45]     "exeErrorCode": 0,
[2026-01-11 09:09:45]     "exeErrorDiag": "",
[2026-01-11 09:09:45]     "pilotErrorCode": 0,
[2026-01-11 09:09:45]     "pilotErrorDiag": "",
[2026-01-11 09:09:45]  *** Listing of results directory ***
[2026-01-11 09:09:45] total 1193964
[2026-01-11 09:09:45] -rwx------. 1 boinc boinc     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:21 queuedata.json
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc       100 Jan 10 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 09:09:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 07:28 run_atlas
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc       105 Jan 10 07:28 job.xml
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc      6391 Jan 10 07:28 init_data.xml
[2026-01-11 09:09:45] -rw-r--r--. 2 boinc boinc 391498270 Jan 10 07:28 EVNT.47962006._000035.pool.root.1
[2026-01-11 09:09:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:28 start_atlas.sh
[2026-01-11 09:09:45] drwxrwx--x. 2 boinc boinc        68 Jan 10 07:28 shared
[2026-01-11 09:09:45] -rw-r--r--. 2 boinc boinc    592616 Jan 10 07:28 input.tar.gz
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc         0 Jan 10 07:28 boinc_lockfile
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc      2892 Jan 10 07:28 pandaJob.out
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc    989374 Jan 10 07:32 agis_schedconf.cvmfs.json
[2026-01-11 09:09:45] drwx------. 5 boinc boinc      4096 Jan 10 07:32 pilot3
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc       533 Jan 11 08:35 boinc_task_state.xml
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc 797698488 Jan 11 09:05 HITS.47962010._001626.pool.root.1
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc      1035 Jan 11 09:06 memory_monitor_summary.json
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc   1516240 Jan 11 09:06 agis_ddmendpoints.agis.ALL.json
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc   2515000 Jan 11 09:06 log.47962010._001626.job.log.tgz.1
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc      8619 Jan 11 09:08 heartbeat.json
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc        95 Jan 11 09:09 pilot_heartbeat.json
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc      5070 Jan 11 09:09 pilotlog.txt
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc  12240834 Jan 11 09:09 log.47962010._001626.job.log.1
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc       353 Jan 11 09:09 output.list
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc       620 Jan 11 09:09 runtime_log
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc  14776320 Jan 11 09:09 result.tar.gz
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc       662 Jan 11 09:09 UFzKDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfcmKDm1CFW2m.diag
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc      8817 Jan 11 09:09 runtime_log.err
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc        29 Jan 11 09:09 wrapper_checkpoint.txt
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc      8192 Jan 11 09:09 boinc_mmap_file
[2026-01-11 09:09:45] -rw-r--r--. 1 boinc boinc     21322 Jan 11 09:09 stderr.txt
[2026-01-11 09:09:45] HITS file was successfully produced:
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc 797698488 Jan 11 09:05 shared/HITS.pool.root.1
[2026-01-11 09:09:45]  *** Contents of shared directory: ***
[2026-01-11 09:09:45] total 1176356
[2026-01-11 09:09:45] -rw-r--r--. 2 boinc boinc 391498270 Jan 10 07:28 ATLAS.root_0
[2026-01-11 09:09:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:28 start_atlas.sh
[2026-01-11 09:09:45] -rw-r--r--. 2 boinc boinc    592616 Jan 10 07:28 input.tar.gz
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc 797698488 Jan 11 09:05 HITS.pool.root.1
[2026-01-11 09:09:45] -rw-------. 1 boinc boinc  14776320 Jan 11 09:09 result.tar.gz
09:09:46 (13072): run_atlas exited; CPU time 356292.055784
09:09:46 (13072): called boinc_finish(0)

</stderr_txt>
]]>

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