Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:16:17 (19434): wrapper (7.7.26015): starting
04:16:17 (19434): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:16:17] Arguments: --nthreads 8
[2026-01-10 04:16:17] Threads: 8
[2026-01-10 04:16:17] Checking for CVMFS
[2026-01-10 04:16:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:16:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:16:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:16:18] 2.11.0.0 4155 129740 79116 154966 4 1 3341402 4096001 0 130560 4 8508642 99.476 11506298 661 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 04:16:18] CVMFS is ok
[2026-01-10 04:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:16:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:16:18] Further information can be found at the LHC@home message board.
[2026-01-10 04:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:16:18] Checking for apptainer binary...
[2026-01-10 04:16:18] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 04:16:18] apptainer is not installed, using version from CVMFS
[2026-01-10 04:16:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:16:18] WARNING: Environment variable TMPDIR already has value [/tmp/job_11010218/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node294
[2026-01-10 04:16:18] apptainer works
[2026-01-10 04:16:18] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:16:18] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:16:18] Starting ATLAS job with PandaID=6963378742
[2026-01-10 04:16:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11010218/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:35:24]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:35:24] 2026-01-10 08:34:50,592 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:35:24] 2026-01-10 08:34:50,979 | INFO     | monitor loop #1406: job 0:6963378742 is in state 'finished'
[2026-01-10 09:35:24] 2026-01-10 08:34:50,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:35:24] 2026-01-10 08:34:51,063 | INFO     | time since job start (19108s) is within the limit (349056.0s)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,221 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:35:24] 2026-01-10 08:34:52,225 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2380.8209375
[2026-01-10 09:35:24] 2026-01-10 08:34:52,230 | INFO     | using path: /tmp/job_11010218/atlas/pilot/slots/0/PanDA_Pilot-6963378742/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,231 | INFO     | extracted standard info from prmon json
[2026-01-10 09:35:24] 2026-01-10 08:34:52,231 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:35:24] 2026-01-10 08:34:52,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:35:24] 2026-01-10 08:34:52,234 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:35:24] 2026-01-10 08:34:52,234 | INFO     | sum of square deviations: 9508312912.613405
[2026-01-10 09:35:24] 2026-01-10 08:34:52,235 | INFO     | sum of deviations: 2583716601285.298
[2026-01-10 09:35:24] 2026-01-10 08:34:52,235 | INFO     | mean x: 1768024559.0351439
[2026-01-10 09:35:24] 2026-01-10 08:34:52,235 | INFO     | mean y: 5665999.063897763
[2026-01-10 09:35:24] 2026-01-10 08:34:52,235 | INFO     | intersect: -480423874618.9533
[2026-01-10 09:35:24] 2026-01-10 08:34:52,236 | INFO     | chi2: 12.6109528442921
[2026-01-10 09:35:24] 2026-01-10 08:34:52,236 | INFO     | sum of square deviations: 9059879952.607132
[2026-01-10 09:35:24] 2026-01-10 08:34:52,237 | INFO     | sum of deviations: 2723320588542.9263
[2026-01-10 09:35:24] 2026-01-10 08:34:52,237 | INFO     | mean x: 1768024406.5357144
[2026-01-10 09:35:24] 2026-01-10 08:34:52,237 | INFO     | mean y: 5713174.006493507
[2026-01-10 09:35:24] 2026-01-10 08:34:52,237 | INFO     | intersect: -531446943213.5136
[2026-01-10 09:35:24] 2026-01-10 08:34:52,237 | INFO     | chi2: 9.12769359821695
[2026-01-10 09:35:24] 2026-01-10 08:34:52,237 | INFO     | current chi2=9.12769359821695 (change=27.62090453499494 %)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,238 | INFO     | sum of square deviations: 8625772842.600668
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | sum of deviations: 2653128429533.9634
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | mean x: 1768024254.0363035
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | mean y: 5688515.00330033
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | intersect: -543805920958.7076
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | chi2: 8.824541231841087
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | current chi2=8.824541231841087 (change=3.32123732149689 %)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | right removable region: 302
[2026-01-10 09:35:24] 2026-01-10 08:34:52,239 | INFO     | sum of square deviations: 9059873242.607134
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | sum of deviations: 2326729036760.821
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | mean x: 1768024711.5357144
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | mean y: 5753364.061688311
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | intersect: -454052965106.1571
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | chi2: 8.877587059742416
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | current chi2=8.877587059742416 (change=29.604153077453304 %)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,241 | INFO     | sum of square deviations: 8625759422.600668
[2026-01-10 09:35:24] 2026-01-10 08:34:52,242 | INFO     | sum of deviations: 2155160045545.4495
[2026-01-10 09:35:24] 2026-01-10 08:34:52,242 | INFO     | mean x: 1768024864.0363035
[2026-01-10 09:35:24] 2026-01-10 08:34:52,243 | INFO     | mean y: 5813553.686468647
[2026-01-10 09:35:24] 2026-01-10 08:34:52,243 | INFO     | intersect: -441738079339.7624
[2026-01-10 09:35:24] 2026-01-10 08:34:52,243 | INFO     | chi2: 8.203146711880464
[2026-01-10 09:35:24] 2026-01-10 08:34:52,243 | INFO     | current chi2=8.203146711880464 (change=7.597113307064774 %)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,243 | INFO     | left removable region: 20
[2026-01-10 09:35:24] 2026-01-10 08:34:52,243 | INFO     | sum of square deviations: 6953685952.070904
[2026-01-10 09:35:24] 2026-01-10 08:34:52,244 | INFO     | sum of deviations: 1947614419527.3767
[2026-01-10 09:35:24] 2026-01-10 08:34:52,244 | INFO     | mean x: 1768024833.5390072
[2026-01-10 09:35:24] 2026-01-10 08:34:52,244 | INFO     | mean y: 5947250.556737589
[2026-01-10 09:35:24] 2026-01-10 08:34:52,244 | INFO     | intersect: -495189073579.7352
[2026-01-10 09:35:24] 2026-01-10 08:34:52,244 | INFO     | chi2: 4.2347101914491905
[2026-01-10 09:35:24] 2026-01-10 08:34:52,244 | INFO     | current memory leak: 280.08 B/s (using 282 data points, chi2=4.23)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | could have reported an average CPU frequency of 2530 MHz (14 samples)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | ..............................
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . Timing measurements:
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . get job = 0 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . initial setup = 1 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . payload setup = 44 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . stage-in = 0 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . payload execution = 19043 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . stage-out = 1 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | . log creation = 0 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,245 | INFO     | ..............................
[2026-01-10 09:35:24] 2026-01-10 08:34:52,294 | INFO     | 
[2026-01-10 09:35:24] 2026-01-10 08:34:52,294 | INFO     | job summary report
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | --------------------------------------------------
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | PanDA job id: 6963378742
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | task id: 47962010
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | errors: (none)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | pilot state: finished 
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | transexitcode: 0
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | exeerrorcode: 0
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | exeerrordiag: 
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | exitcode: 0
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | exitmsg: OK
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | cpuconsumptiontime: 127827 s
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | nevents: 900
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | neventsw: 0
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | pid: 29731
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | pgrp: 29731
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | corecount: 8
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | event service: False
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | sizes: {0: 2284410, 1: 2284776, 2: 2285038, 11: 2285066, 19091: 2318858, 19092: 2327882, 19093: 2328066, 19096: 2328312}
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | --------------------------------------------------
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | 
[2026-01-10 09:35:24] 2026-01-10 08:34:52,295 | INFO     | executing command: ls -lF /tmp/job_11010218/atlas/pilot/slots/0
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,305 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,305 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:35:24] 2026-01-10 08:34:52,305 | INFO     | job 6963378742 has completed (purged errors)
[2026-01-10 09:35:24] 2026-01-10 08:34:52,305 | INFO     | overall cleanup function is called
[2026-01-10 09:35:24] 2026-01-10 08:34:53,312 | INFO     | --- collectZombieJob: --- 10, [29731]
[2026-01-10 09:35:24] 2026-01-10 08:34:53,312 | INFO     | zombie collector waiting for pid 29731
[2026-01-10 09:35:24] 2026-01-10 08:34:53,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:35:24] 2026-01-10 08:34:53,312 | INFO     | collected zombie processes
[2026-01-10 09:35:24] 2026-01-10 08:34:53,312 | INFO     | will attempt to kill all subprocesses of pid=29731
[2026-01-10 09:35:24] 2026-01-10 08:34:53,398 | INFO     | process IDs to be killed: [29731] (in reverse order)
[2026-01-10 09:35:24] 2026-01-10 08:34:53,427 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:35:24] 2026-01-10 08:34:53,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:35:24] 2026-01-10 08:34:53,430 | INFO     | did not find any defunct processes belonging to 29731
[2026-01-10 09:35:24] 2026-01-10 08:34:53,433 | INFO     | did not find any defunct processes belonging to 29731
[2026-01-10 09:35:24] 2026-01-10 08:34:53,433 | INFO     | ready for new job
[2026-01-10 09:35:24] 2026-01-10 08:34:53,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:35:24] 2026-01-10 08:34:53,434 | INFO     | ***************************************
[2026-01-10 09:35:24] 2026-01-10 08:34:53,434 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:35:24] 2026-01-10 08:34:53,434 | INFO     | ***************************************
[2026-01-10 09:35:24] 2026-01-10 08:34:53,434 | INFO     | 
[2026-01-10 09:35:24] 2026-01-10 08:34:53,448 | INFO     | architecture information:
[2026-01-10 09:35:24] 2026-01-10 08:34:53,448 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:35:24] 2026-01-10 08:34:53,454 | INFO     | cat /etc/os-release:
[2026-01-10 09:35:24] NAME="CentOS Linux"
[2026-01-10 09:35:24] VERSION="7 (Core)"
[2026-01-10 09:35:24] ID="centos"
[2026-01-10 09:35:24] ID_LIKE="rhel fedora"
[2026-01-10 09:35:24] VERSION_ID="7"
[2026-01-10 09:35:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:35:24] ANSI_COLOR="0;31"
[2026-01-10 09:35:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:35:24] HOME_URL="https://www.centos.org/"
[2026-01-10 09:35:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:35:24] 
[2026-01-10 09:35:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:35:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:35:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:35:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:35:24] 
[2026-01-10 09:35:24] 2026-01-10 08:34:53,454 | INFO     | ***************************************
[2026-01-10 09:35:24] 2026-01-10 08:34:53,957 | INFO     | executing command: df -mP /tmp/job_11010218/atlas/pilot/slots/0
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | INFO     | sufficient remaining disk space (227846127616 B)
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | INFO     | update_server=False
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:35:24] 2026-01-10 08:34:53,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:35:24] 2026-01-10 08:34:54,006 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:35:24] 2026-01-10 08:34:54,153 | INFO     | all job control threads have been joined
[2026-01-10 09:35:24] 2026-01-10 08:34:54,244 | INFO     | all data control threads have been joined
[2026-01-10 09:35:24] 2026-01-10 08:34:54,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:35:24] 2026-01-10 08:34:54,488 | INFO     | aborting loop
[2026-01-10 09:35:24] 2026-01-10 08:34:54,969 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:54,970 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,031 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,055 | INFO     | all payload control threads have been joined
[2026-01-10 09:35:24] 2026-01-10 08:34:55,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:35:24] 2026-01-10 08:34:55,158 | INFO     | [job] control thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,249 | INFO     | [data] control thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,255 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,493 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,714 | INFO     | [job] validate thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,752 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,802 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,884 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:55,970 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:56,060 | INFO     | [payload] control thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:56,394 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:34:59,066 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:35:04,684 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:35:24] 2026-01-10 08:35:05,689 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:35:24] 2026-01-10 08:35:05,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2026-01-10 09:35:24] 2026-01-10 08:35:10,765 | INFO     | all workflow threads have been joined
[2026-01-10 09:35:24] 2026-01-10 08:35:10,765 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:35:24] 2026-01-10 08:35:10,765 | INFO     | traces error code: 0
[2026-01-10 09:35:24] 2026-01-10 08:35:10,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:35:24] 2026-01-10 08:35:24,235 | INFO     | PID=23219 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:35:24] 2026-01-10 08:35:24,235 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:35:24] 2026-01-10 08:35:24,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:35:24] 2026-01-10 08:35:24,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:35:24] 2026-01-10 08:35:24,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:35:24] 2026-01-10 08:35:24,235 | INFO     | [monitor] control thread has ended
[2026-01-10 09:35:24] 2026-01-10 08:35:24,290 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:35:24] 2026-01-10 08:35:24,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:35:24] 2026-01-10 08:35:24,293 [wrapper] pilotpid: 23219
[2026-01-10 09:35:24] 2026-01-10 08:35:24,294 [wrapper] Pilot exit status: 0
[2026-01-10 09:35:24] 2026-01-10 08:35:24,298 [wrapper] pandaids: 6963378742
[2026-01-10 09:35:24] 2026-01-10 08:35:24,317 [wrapper] cleanup supervisor_pilot  3328 23220
[2026-01-10 09:35:24] 2026-01-10 08:35:24,319 [wrapper] Test setup, not cleaning
[2026-01-10 09:35:24] 2026-01-10 08:35:24,320 [wrapper] apfmon messages muted
[2026-01-10 09:35:24] 2026-01-10 08:35:24,321 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:35:24] 2026-01-10 08:35:24,322 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:35:24]  *** Error codes and diagnostics ***
[2026-01-10 09:35:24]     "exeErrorCode": 0,
[2026-01-10 09:35:24]     "exeErrorDiag": "",
[2026-01-10 09:35:24]     "pilotErrorCode": 0,
[2026-01-10 09:35:24]     "pilotErrorDiag": "",
[2026-01-10 09:35:24]  *** Listing of results directory ***
[2026-01-10 09:35:24] total 1180124
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:13 queuedata.json
[2026-01-10 09:35:24] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user       100 Jan 10 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:35:24] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 02:36 run_atlas
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user       105 Jan 10 02:36 job.xml
[2026-01-10 09:35:24] -rw-r--r-- 2 mf493845 unix-user 391552305 Jan 10 04:16 EVNT.47962006._000101.pool.root.1
[2026-01-10 09:35:24] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:16 start_atlas.sh
[2026-01-10 09:35:24] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 04:16 shared
[2026-01-10 09:35:24] -rw-r--r-- 2 mf493845 unix-user    592616 Jan 10 04:16 input.tar.gz
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      6390 Jan 10 04:16 init_data.xml
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user         0 Jan 10 04:16 boinc_setup_complete
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      8192 Jan 10 04:16 boinc_mmap_file
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user         0 Jan 10 04:16 boinc_lockfile
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      2892 Jan 10 04:16 pandaJob.out
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user    989374 Jan 10 04:16 agis_schedconf.cvmfs.json
[2026-01-10 09:35:24] drwx------ 5 mf493845 unix-user       440 Jan 10 04:16 pilot3
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user 804360888 Jan 10 09:34 HITS.47962010._001248.pool.root.1
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      1029 Jan 10 09:34 memory_monitor_summary.json
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user   1516240 Jan 10 09:34 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user   1578741 Jan 10 09:34 log.47962010._001248.job.log.tgz.1
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      8569 Jan 10 09:34 heartbeat.json
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user        95 Jan 10 09:35 pilot_heartbeat.json
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user       745 Jan 10 09:35 pilotlog.txt
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user   2745905 Jan 10 09:35 log.47962010._001248.job.log.1
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user       353 Jan 10 09:35 output.list
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user       620 Jan 10 09:35 runtime_log
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user   4341760 Jan 10 09:35 result.tar.gz
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user      9221 Jan 10 09:35 runtime_log.err
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user       651 Jan 10 09:35 3UKODmHsLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGTmKDmDItrMo.diag
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user     21771 Jan 10 09:35 stderr.txt
[2026-01-10 09:35:24] HITS file was successfully produced:
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user 804360888 Jan 10 09:34 shared/HITS.pool.root.1
[2026-01-10 09:35:24]  *** Contents of shared directory: ***
[2026-01-10 09:35:24] total 1172724
[2026-01-10 09:35:24] -rw-r--r-- 2 mf493845 unix-user 391552305 Jan 10 04:16 ATLAS.root_0
[2026-01-10 09:35:24] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:16 start_atlas.sh
[2026-01-10 09:35:24] -rw-r--r-- 2 mf493845 unix-user    592616 Jan 10 04:16 input.tar.gz
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user 804360888 Jan 10 09:34 HITS.pool.root.1
[2026-01-10 09:35:24] -rw------- 1 mf493845 unix-user   4341760 Jan 10 09:35 result.tar.gz
09:35:26 (19434): run_atlas exited; CPU time 127983.736376
09:35:26 (19434): called boinc_finish(0)

</stderr_txt>
]]>

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