Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:07 (835): wrapper (7.7.26015): starting
07:04:07 (835): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 07:04:07] Arguments: --nthreads 8
[2026-01-10 07:04:07] Threads: 8
[2026-01-10 07:04:07] Checking for CVMFS
[2026-01-10 07:04:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:04:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:04:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:04:11] 2.11.2.0 2166 603 61500 154969 1 63 18578727 25165824 899 130560 0 253731 99.604 439595 5641 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 07:04:11] CVMFS is ok
[2026-01-10 07:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:04:11] Checking for apptainer binary...
[2026-01-10 07:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:04:11] Running /usr/bin/apptainer --version
[2026-01-10 07:04:11] apptainer version 1.3.2-1.el7
[2026-01-10 07:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:04:32] cg-vwn386.simple-grid.lan
[2026-01-10 07:04:32] apptainer works
[2026-01-10 07:04:33] Set ATHENA_PROC_NUMBER=8
[2026-01-10 07:04:33] Set ATHENA_CORE_NUMBER=8
[2026-01-10 07:04:33] Starting ATLAS job with PandaID=6963805859
[2026-01-10 07:04:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:13:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:13:38] 2026-01-10 12:12:38,304 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 13:13:38] 2026-01-10 12:12:38,305 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 13:13:38] 2026-01-10 12:12:38,307 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963805859/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,308 | INFO     | extracted standard info from prmon json
[2026-01-10 13:13:38] 2026-01-10 12:12:38,308 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:13:38] 2026-01-10 12:12:38,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:13:38] 2026-01-10 12:12:38,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:13:38] 2026-01-10 12:12:38,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:13:38] 2026-01-10 12:12:38,316 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:13:38] 2026-01-10 12:12:38,317 | INFO     | sum of square deviations: 13068103627.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,335 | INFO     | sum of deviations: 94719368147.00002
[2026-01-10 13:13:38] 2026-01-10 12:12:38,336 | INFO     | mean x: 1768036437.5
[2026-01-10 13:13:38] 2026-01-10 12:12:38,336 | INFO     | mean y: 2456883.9195402297
[2026-01-10 13:13:38] 2026-01-10 12:12:38,336 | INFO     | intersect: -12812508393.434767
[2026-01-10 13:13:38] 2026-01-10 12:12:38,337 | INFO     | chi2: 8.507670066851036
[2026-01-10 13:13:38] 2026-01-10 12:12:38,337 | INFO     | sum of square deviations: 12512874612.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,341 | INFO     | sum of deviations: 140523370288.00003
[2026-01-10 13:13:38] 2026-01-10 12:12:38,341 | INFO     | mean x: 1768036285.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,342 | INFO     | mean y: 2469351.912536443
[2026-01-10 13:13:38] 2026-01-10 12:12:38,342 | INFO     | intersect: -19853113418.924786
[2026-01-10 13:13:38] 2026-01-10 12:12:38,342 | INFO     | chi2: 6.960179482483702
[2026-01-10 13:13:38] 2026-01-10 12:12:38,342 | INFO     | current chi2=6.960179482483702 (change=18.189358216850906 %)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,343 | INFO     | right removable region: 342
[2026-01-10 13:13:38] 2026-01-10 12:12:38,343 | INFO     | sum of square deviations: 12512874612.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,347 | INFO     | sum of deviations: -25194916924.99999
[2026-01-10 13:13:38] 2026-01-10 12:12:38,347 | INFO     | mean x: 1768036590.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,347 | INFO     | mean y: 2489799.8775510206
[2026-01-10 13:13:38] 2026-01-10 12:12:38,348 | INFO     | intersect: 3562465935.3924513
[2026-01-10 13:13:38] 2026-01-10 12:12:38,348 | INFO     | chi2: 3.8846444716551094
[2026-01-10 13:13:38] 2026-01-10 12:12:38,348 | INFO     | current chi2=3.8846444716551094 (change=54.339502576726716 %)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,349 | INFO     | sum of square deviations: 11973599384.5
[2026-01-10 13:13:38] 2026-01-10 12:12:38,353 | INFO     | sum of deviations: -100429494119.5
[2026-01-10 13:13:38] 2026-01-10 12:12:38,353 | INFO     | mean x: 1768036742.5
[2026-01-10 13:13:38] 2026-01-10 12:12:38,353 | INFO     | mean y: 2511022.275147929
[2026-01-10 13:13:38] 2026-01-10 12:12:38,353 | INFO     | intersect: 14832056418.94356
[2026-01-10 13:13:38] 2026-01-10 12:12:38,354 | INFO     | chi2: 1.9542011629774376
[2026-01-10 13:13:38] 2026-01-10 12:12:38,354 | INFO     | current chi2=1.9542011629774376 (change=49.69420812543955 %)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,355 | INFO     | sum of square deviations: 11450045382.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,358 | INFO     | sum of deviations: -106613666464.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,365 | INFO     | mean x: 1768036895.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,365 | INFO     | mean y: 2512802.357357357
[2026-01-10 13:13:38] 2026-01-10 12:12:38,365 | INFO     | intersect: 16465058541.774427
[2026-01-10 13:13:38] 2026-01-10 12:12:38,366 | INFO     | chi2: 1.9049229289867995
[2026-01-10 13:13:38] 2026-01-10 12:12:38,366 | INFO     | current chi2=1.9049229289867995 (change=2.5216561592644533 %)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,366 | INFO     | left removable region: 30
[2026-01-10 13:13:38] 2026-01-10 12:12:38,367 | INFO     | sum of square deviations: 9417545878.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,370 | INFO     | sum of deviations: -29922702771.0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,370 | INFO     | mean x: 1768037169.5
[2026-01-10 13:13:38] 2026-01-10 12:12:38,370 | INFO     | mean y: 2517104.25
[2026-01-10 13:13:38] 2026-01-10 12:12:38,370 | INFO     | intersect: 5620164355.071139
[2026-01-10 13:13:38] 2026-01-10 12:12:38,371 | INFO     | chi2: 0.17529484996055664
[2026-01-10 13:13:38] 2026-01-10 12:12:38,371 | INFO     | current memory leak: -3.18 B/s (using 312 data points, chi2=0.18)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,372 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,372 | INFO     | ..............................
[2026-01-10 13:13:38] 2026-01-10 12:12:38,372 | INFO     | . Timing measurements:
[2026-01-10 13:13:38] 2026-01-10 12:12:38,372 | INFO     | . get job = 0 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | . initial setup = 12 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | . payload setup = 145 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | . stage-in = 0 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | . payload execution = 21342 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | . stage-out = 6 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | . log creation = 1 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,373 | INFO     | ..............................
[2026-01-10 13:13:38] 2026-01-10 12:12:38,804 | INFO     | 
[2026-01-10 13:13:38] 2026-01-10 12:12:38,804 | INFO     | job summary report
[2026-01-10 13:13:38] 2026-01-10 12:12:38,804 | INFO     | --------------------------------------------------
[2026-01-10 13:13:38] 2026-01-10 12:12:38,804 | INFO     | PanDA job id: 6963805859
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | task id: 47898826
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | errors: (none)
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | pilot state: finished 
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | transexitcode: 0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | exeerrorcode: 0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | exeerrordiag: 
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | exitcode: 0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,805 | INFO     | exitmsg: OK
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | cpuconsumptiontime: 80435 s
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | nevents: 400
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | neventsw: 0
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | pid: 11134
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | pgrp: 11134
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | corecount: 8
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | event service: False
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | sizes: {0: 2283093, 1: 2283779, 2: 2283978, 13: 2283978, 23: 2284034, 34: 2284062, 45: 2284218, 56: 2284246, 66: 2284274, 77: 2284302, 88: 2284358, 99: 2284666, 10
[2026-01-10 13:13:38] 2026-01-10 12:12:38,806 | INFO     | --------------------------------------------------
[2026-01-10 13:13:38] 2026-01-10 12:12:38,807 | INFO     | 
[2026-01-10 13:13:38] 2026-01-10 12:12:38,807 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-10 13:13:38] 2026-01-10 12:12:38,975 | INFO     | time since job start (21829s) is within the limit (349056.0s)
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:13:38] 2026-01-10 12:12:39,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:13:38] 2026-01-10 12:12:39,347 | INFO     | job 6963805859 has completed (purged errors)
[2026-01-10 13:13:38] 2026-01-10 12:12:39,347 | INFO     | overall cleanup function is called
[2026-01-10 13:13:38] 2026-01-10 12:12:40,356 | INFO     | --- collectZombieJob: --- 10, [11134]
[2026-01-10 13:13:38] 2026-01-10 12:12:40,356 | INFO     | zombie collector waiting for pid 11134
[2026-01-10 13:13:38] 2026-01-10 12:12:40,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:13:38] 2026-01-10 12:12:40,356 | INFO     | collected zombie processes
[2026-01-10 13:13:38] 2026-01-10 12:12:40,356 | INFO     | will attempt to kill all subprocesses of pid=11134
[2026-01-10 13:13:38] 2026-01-10 12:12:40,449 | INFO     | process IDs to be killed: [11134] (in reverse order)
[2026-01-10 13:13:38] 2026-01-10 12:12:41,206 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:13:38] 2026-01-10 12:12:41,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:13:38] 2026-01-10 12:12:41,209 | INFO     | did not find any defunct processes belonging to 11134
[2026-01-10 13:13:38] 2026-01-10 12:12:41,210 | INFO     | did not find any defunct processes belonging to 11134
[2026-01-10 13:13:38] 2026-01-10 12:12:41,211 | INFO     | ready for new job
[2026-01-10 13:13:38] 2026-01-10 12:12:41,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:13:38] 2026-01-10 12:12:41,213 | INFO     | ***************************************
[2026-01-10 13:13:38] 2026-01-10 12:12:41,213 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:13:38] 2026-01-10 12:12:41,214 | INFO     | ***************************************
[2026-01-10 13:13:38] 2026-01-10 12:12:41,214 | INFO     | 
[2026-01-10 13:13:38] 2026-01-10 12:12:41,214 | INFO     | pilot is running in a VM
[2026-01-10 13:13:38] 2026-01-10 12:12:41,214 | INFO     | architecture information:
[2026-01-10 13:13:38] 2026-01-10 12:12:41,215 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:13:38] 2026-01-10 12:12:41,598 | INFO     | cat /etc/os-release:
[2026-01-10 13:13:38] NAME="CentOS Linux"
[2026-01-10 13:13:38] VERSION="7 (Core)"
[2026-01-10 13:13:38] ID="centos"
[2026-01-10 13:13:38] ID_LIKE="rhel fedora"
[2026-01-10 13:13:38] VERSION_ID="7"
[2026-01-10 13:13:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:13:38] ANSI_COLOR="0;31"
[2026-01-10 13:13:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:13:38] HOME_URL="https://www.centos.org/"
[2026-01-10 13:13:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:13:38] 
[2026-01-10 13:13:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:13:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:13:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:13:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:13:38] 
[2026-01-10 13:13:38] 2026-01-10 12:12:41,599 | INFO     | ***************************************
[2026-01-10 13:13:38] 2026-01-10 12:12:42,102 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-10 13:13:38] 2026-01-10 12:12:42,400 | INFO     | sufficient remaining disk space (496730374144 B)
[2026-01-10 13:13:38] 2026-01-10 12:12:42,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:13:38] 2026-01-10 12:12:42,401 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:13:38] 2026-01-10 12:12:42,401 | INFO     | update_server=False
[2026-01-10 13:13:38] 2026-01-10 12:12:42,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:13:38] 2026-01-10 12:12:42,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:13:38] 2026-01-10 12:12:42,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:13:38] 2026-01-10 12:12:42,414 | INFO     | aborting loop
[2026-01-10 13:13:38] 2026-01-10 12:12:42,887 | INFO     | all data control threads have been joined
[2026-01-10 13:13:38] 2026-01-10 12:12:43,329 | INFO     | all payload control threads have been joined
[2026-01-10 13:13:38] 2026-01-10 12:12:43,407 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:43,419 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:43,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:13:38] 2026-01-10 12:12:43,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:13:38] 2026-01-10 12:12:43,613 | INFO     | [job] validate thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:43,780 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:43,893 | INFO     | [data] control thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:43,923 | INFO     | all job control threads have been joined
[2026-01-10 13:13:38] 2026-01-10 12:12:44,058 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,084 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,335 | INFO     | [payload] control thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,517 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,711 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,851 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,907 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:44,929 | INFO     | [job] control thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:45,560 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:12:46,411 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:13:38] 2026-01-10 12:13:12,132 | INFO     | PID=4637 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 13:13:38] 2026-01-10 12:13:12,132 | INFO     | .. there are 2 such processes running
[2026-01-10 13:13:38] 2026-01-10 12:13:12,133 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:13:38] 2026-01-10 12:13:12,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:13:38] 2026-01-10 12:13:12,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:13:38] 2026-01-10 12:13:26,788 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:13:38] 2026-01-10 12:13:27,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415331514176)>', '<ExcThread(monitor, started 140414610822912)>']
[2026-01-10 13:13:38] 2026-01-10 12:13:28,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:13:38] 2026-01-10 12:13:28,229 | INFO     | [monitor] control thread has ended
[2026-01-10 13:13:38] 2026-01-10 12:13:32,820 | INFO     | all workflow threads have been joined
[2026-01-10 13:13:38] 2026-01-10 12:13:32,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:13:38] 2026-01-10 12:13:32,820 | INFO     | traces error code: 0
[2026-01-10 13:13:38] 2026-01-10 12:13:32,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:13:38] 2026-01-10 12:13:33,207 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:13:38] 2026-01-10 12:13:33,266 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:13:38] 2026-01-10 12:13:33,373 [wrapper] pilotpid: 4637
[2026-01-10 13:13:38] 2026-01-10 12:13:33,428 [wrapper] Pilot exit status: 0
[2026-01-10 13:13:38] 2026-01-10 12:13:33,968 [wrapper] pandaids: 6963805859
[2026-01-10 13:13:38] 2026-01-10 12:13:34,953 [wrapper] cleanup supervisor_pilot 10326 4638
[2026-01-10 13:13:38] 2026-01-10 12:13:35,068 [wrapper] Test setup, not cleaning
[2026-01-10 13:13:38] 2026-01-10 12:13:35,187 [wrapper] apfmon messages muted
[2026-01-10 13:13:38] 2026-01-10 12:13:35,297 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:13:38] 2026-01-10 12:13:35,401 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:13:38]  *** Error codes and diagnostics ***
[2026-01-10 13:13:38]     "exeErrorCode": 0,
[2026-01-10 13:13:38]     "exeErrorDiag": "",
[2026-01-10 13:13:38]     "pilotErrorCode": 0,
[2026-01-10 13:13:38]     "pilotErrorDiag": "",
[2026-01-10 13:13:38]  *** Listing of results directory ***
[2026-01-10 13:13:38] total 448620
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 13:13:38] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:26 queuedata.json
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc       100 Jan 10 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:13:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 07:04 run_atlas
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc       105 Jan 10 07:04 job.xml
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc      6392 Jan 10 07:04 init_data.xml
[2026-01-10 13:13:38] -rw-r--r--. 2 boinc boinc 226275280 Jan 10 07:04 EVNT.47898824._001126.pool.root.1
[2026-01-10 13:13:38] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:04 start_atlas.sh
[2026-01-10 13:13:38] drwxrwx--x. 2 boinc boinc        68 Jan 10 07:04 shared
[2026-01-10 13:13:38] -rw-r--r--. 2 boinc boinc    592412 Jan 10 07:04 input.tar.gz
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc         0 Jan 10 07:04 boinc_lockfile
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc      2520 Jan 10 07:04 pandaJob.out
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc    989374 Jan 10 07:08 agis_schedconf.cvmfs.json
[2026-01-10 13:13:38] drwx------. 5 boinc boinc      4096 Jan 10 07:08 pilot3
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc 222313805 Jan 10 13:09 HITS.47898826._039828.pool.root.1
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc       531 Jan 10 13:09 boinc_task_state.xml
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc      1024 Jan 10 13:10 memory_monitor_summary.json
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc   1516240 Jan 10 13:10 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc    544541 Jan 10 13:10 log.47898826._039828.job.log.tgz.1
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc      7772 Jan 10 13:12 heartbeat.json
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc        95 Jan 10 13:13 pilot_heartbeat.json
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc        28 Jan 10 13:13 wrapper_checkpoint.txt
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc      8192 Jan 10 13:13 boinc_mmap_file
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc      4884 Jan 10 13:13 pilotlog.txt
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc   2904768 Jan 10 13:13 log.47898826._039828.job.log.1
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc       357 Jan 10 13:13 output.list
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc       620 Jan 10 13:13 runtime_log
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc   3471360 Jan 10 13:13 result.tar.gz
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc      8833 Jan 10 13:13 runtime_log.err
[2026-01-10 13:13:38] -rw-------. 1 boinc boinc       657 Jan 10 13:13 QDGNDmUDJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE4gKDmPl7gBo.diag
[2026-01-10 13:13:38] -rw-r--r--. 1 boinc boinc     20763 Jan 10 13:13 stderr.txt
[2026-01-10 13:13:39] HITS file was successfully produced:
[2026-01-10 13:13:39] -rw-------. 1 boinc boinc 222313805 Jan 10 13:09 shared/HITS.pool.root.1
[2026-01-10 13:13:39]  *** Contents of shared directory: ***
[2026-01-10 13:13:39] total 442064
[2026-01-10 13:13:39] -rw-r--r--. 2 boinc boinc 226275280 Jan 10 07:04 ATLAS.root_0
[2026-01-10 13:13:39] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:04 start_atlas.sh
[2026-01-10 13:13:39] -rw-r--r--. 2 boinc boinc    592412 Jan 10 07:04 input.tar.gz
[2026-01-10 13:13:39] -rw-------. 1 boinc boinc 222313805 Jan 10 13:09 HITS.pool.root.1
[2026-01-10 13:13:39] -rw-------. 1 boinc boinc   3471360 Jan 10 13:13 result.tar.gz
13:13:40 (835): run_atlas exited; CPU time 80648.091180
13:13:40 (835): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN