Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:50:25 (29409): wrapper (7.7.26015): starting
04:50:25 (29409): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 04:50:25] Arguments: --nthreads 8
[2026-01-10 04:50:25] Threads: 8
[2026-01-10 04:50:25] Checking for CVMFS
[2026-01-10 04:50:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:50:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:50:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:50:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:50:25] 2.11.0.0 4525 36428 64400 154966 3 97 3051342 4096001 943 130560 0 2332876 99.201 2741501 607 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 04:50:25] CVMFS is ok
[2026-01-10 04:50:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:50:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:50:25] Further information can be found at the LHC@home message board.
[2026-01-10 04:50:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:50:25] Checking for apptainer binary...
[2026-01-10 04:50:25] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 04:50:25] apptainer is not installed, using version from CVMFS
[2026-01-10 04:50:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:50:26] WARNING: Environment variable TMPDIR already has value [/tmp/job_11011062/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node047
[2026-01-10 04:50:26] apptainer works
[2026-01-10 04:50:26] Set ATHENA_PROC_NUMBER=8
[2026-01-10 04:50:26] Set ATHENA_CORE_NUMBER=8
[2026-01-10 04:50:26] Starting ATLAS job with PandaID=6963381646
[2026-01-10 04:50:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11011062/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:35:05]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:35:05] 2026-01-10 08:33:58,756 | INFO     | time since job start (17007s) is within the limit (349056.0s)
[2026-01-10 09:35:05] 2026-01-10 08:33:59,875 | INFO     | PID=821 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-10 09:35:05] 2026-01-10 08:34:00,875 | INFO     | time since job start (17009s) is within the limit (349056.0s)
[2026-01-10 09:35:05] 2026-01-10 08:34:01,358 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:35:05] 2026-01-10 08:34:02,437 | WARNING  | process 7827 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:35:05] 2026-01-10 08:34:02,438 | INFO     | using path: /tmp/job_11011062/atlas/pilot/slots/0/PanDA_Pilot-6963381646/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:35:05] 2026-01-10 08:34:02,488 | INFO     | job 6963381646 has state=finished
[2026-01-10 09:35:05] 2026-01-10 08:34:02,488 | INFO     | preparing for final server update for job 6963381646 in state='finished'
[2026-01-10 09:35:05] 2026-01-10 08:34:02,488 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:35:05] 2026-01-10 08:34:02,488 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:35:05] 2026-01-10 08:34:02,488 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:35:05] 2026-01-10 08:34:02,489 | INFO     | job 6963381646 has finished - writing final server update
[2026-01-10 09:35:05] 2026-01-10 08:34:02,489 | INFO     | total number of processed events: 900 (read)
[2026-01-10 09:35:05] 2026-01-10 08:34:02,489 | INFO     | executing command: lscpu
[2026-01-10 09:35:05] 2026-01-10 08:34:02,521 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:35:05] 2026-01-10 08:34:02,529 | INFO     | number of running child processes to parent process 7827: 1
[2026-01-10 09:35:05] 2026-01-10 08:34:02,529 | INFO     | maximum number of monitored processes: 16
[2026-01-10 09:35:05] 2026-01-10 08:34:02,876 | INFO     | time since job start (17011s) is within the limit (349056.0s)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,179 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:35:05] 2026-01-10 08:34:04,183 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2365.2973281249997
[2026-01-10 09:35:05] 2026-01-10 08:34:04,189 | INFO     | using path: /tmp/job_11011062/atlas/pilot/slots/0/PanDA_Pilot-6963381646/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,189 | INFO     | extracted standard info from prmon json
[2026-01-10 09:35:05] 2026-01-10 08:34:04,189 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:35:05] 2026-01-10 08:34:04,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:35:05] 2026-01-10 08:34:04,191 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:35:05] 2026-01-10 08:34:04,192 | INFO     | sum of square deviations: 6734191380.0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,193 | INFO     | sum of deviations: 2036005013691.999
[2026-01-10 09:35:05] 2026-01-10 08:34:04,193 | INFO     | mean x: 1768025527.0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,193 | INFO     | mean y: 4310867.867383513
[2026-01-10 09:35:05] 2026-01-10 08:34:04,193 | INFO     | intersect: -534537794365.17975
[2026-01-10 09:35:05] 2026-01-10 08:34:04,193 | INFO     | chi2: 11.488424972390156
[2026-01-10 09:35:05] 2026-01-10 08:34:04,193 | INFO     | sum of square deviations: 6378584712.5
[2026-01-10 09:35:05] 2026-01-10 08:34:04,194 | INFO     | sum of deviations: 2113274576750.5
[2026-01-10 09:35:05] 2026-01-10 08:34:04,194 | INFO     | mean x: 1768025374.5
[2026-01-10 09:35:05] 2026-01-10 08:34:04,194 | INFO     | mean y: 4343737.135036496
[2026-01-10 09:35:05] 2026-01-10 08:34:04,194 | INFO     | intersect: -585756172644.9121
[2026-01-10 09:35:05] 2026-01-10 08:34:04,195 | INFO     | chi2: 11.818242374400016
[2026-01-10 09:35:05] 2026-01-10 08:34:04,195 | INFO     | current chi2=11.818242374400016 (change=-2.870867005725347 %)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,195 | INFO     | right removable region: 273
[2026-01-10 09:35:05] 2026-01-10 08:34:04,195 | INFO     | sum of square deviations: 6378584712.5
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | sum of deviations: 1928958551007.996
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | mean x: 1768025679.5
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | mean y: 4356607.218978102
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | intersect: -534667268305.0993
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | chi2: 9.904579606677085
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | current chi2=9.904579606677085 (change=13.786444786987657 %)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,196 | INFO     | left removable region: 10
[2026-01-10 09:35:05] 2026-01-10 08:34:04,197 | INFO     | sum of square deviations: 5640782972.0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,197 | INFO     | sum of deviations: 1918884543503.9995
[2026-01-10 09:35:05] 2026-01-10 08:34:04,197 | INFO     | mean x: 1768025649.0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | mean y: 4410467.577946768
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | intersect: -601443492638.2974
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | chi2: 9.431821954486075
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | current memory leak: 340.18 B/s (using 263 data points, chi2=9.43)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | could have reported an average CPU frequency of 2493 MHz (13 samples)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | ..............................
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . Timing measurements:
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . get job = 0 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . initial setup = 1 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . payload setup = 2 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . stage-in = 0 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . payload execution = 16987 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . stage-out = 1 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | . log creation = 0 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,198 | INFO     | ..............................
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | 
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | job summary report
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | --------------------------------------------------
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | PanDA job id: 6963381646
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | task id: 47962010
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | errors: (none)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | pilot state: finished 
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | transexitcode: 0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | exeerrorcode: 0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | exeerrordiag: 
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | exitcode: 0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | exitmsg: OK
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | cpuconsumptiontime: 130264 s
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | nevents: 900
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | neventsw: 0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | pid: 7827
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | pgrp: 7827
[2026-01-10 09:35:05] 2026-01-10 08:34:04,247 | INFO     | corecount: 8
[2026-01-10 09:35:05] 2026-01-10 08:34:04,248 | INFO     | event service: False
[2026-01-10 09:35:05] 2026-01-10 08:34:04,248 | INFO     | sizes: {0: 2284750, 2: 2285012, 11: 2285040, 16993: 2318112, 16995: 2327136, 16998: 2327192, 17001: 2327566}
[2026-01-10 09:35:05] 2026-01-10 08:34:04,248 | INFO     | --------------------------------------------------
[2026-01-10 09:35:05] 2026-01-10 08:34:04,248 | INFO     | 
[2026-01-10 09:35:05] 2026-01-10 08:34:04,248 | INFO     | executing command: ls -lF /tmp/job_11011062/atlas/pilot/slots/0
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | job 6963381646 has completed (purged errors)
[2026-01-10 09:35:05] 2026-01-10 08:34:04,258 | INFO     | overall cleanup function is called
[2026-01-10 09:35:05] 2026-01-10 08:34:05,265 | INFO     | --- collectZombieJob: --- 10, [7827]
[2026-01-10 09:35:05] 2026-01-10 08:34:05,265 | INFO     | zombie collector waiting for pid 7827
[2026-01-10 09:35:05] 2026-01-10 08:34:05,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:35:05] 2026-01-10 08:34:05,265 | INFO     | collected zombie processes
[2026-01-10 09:35:05] 2026-01-10 08:34:05,266 | INFO     | will attempt to kill all subprocesses of pid=7827
[2026-01-10 09:35:05] 2026-01-10 08:34:05,351 | INFO     | process IDs to be killed: [7827] (in reverse order)
[2026-01-10 09:35:05] 2026-01-10 08:34:05,379 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:35:05] 2026-01-10 08:34:05,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:35:05] 2026-01-10 08:34:05,383 | INFO     | did not find any defunct processes belonging to 7827
[2026-01-10 09:35:05] 2026-01-10 08:34:05,385 | INFO     | did not find any defunct processes belonging to 7827
[2026-01-10 09:35:05] 2026-01-10 08:34:05,385 | INFO     | ready for new job
[2026-01-10 09:35:05] 2026-01-10 08:34:05,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:35:05] 2026-01-10 08:34:05,386 | INFO     | ***************************************
[2026-01-10 09:35:05] 2026-01-10 08:34:05,386 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:35:05] 2026-01-10 08:34:05,387 | INFO     | ***************************************
[2026-01-10 09:35:05] 2026-01-10 08:34:05,387 | INFO     | 
[2026-01-10 09:35:05] 2026-01-10 08:34:05,401 | INFO     | architecture information:
[2026-01-10 09:35:05] 2026-01-10 08:34:05,401 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:35:05] 2026-01-10 08:34:05,408 | INFO     | cat /etc/os-release:
[2026-01-10 09:35:05] NAME="CentOS Linux"
[2026-01-10 09:35:05] VERSION="7 (Core)"
[2026-01-10 09:35:05] ID="centos"
[2026-01-10 09:35:05] ID_LIKE="rhel fedora"
[2026-01-10 09:35:05] VERSION_ID="7"
[2026-01-10 09:35:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:35:05] ANSI_COLOR="0;31"
[2026-01-10 09:35:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:35:05] HOME_URL="https://www.centos.org/"
[2026-01-10 09:35:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:35:05] 
[2026-01-10 09:35:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:35:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:35:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:35:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:35:05] 
[2026-01-10 09:35:05] 2026-01-10 08:34:05,408 | INFO     | ***************************************
[2026-01-10 09:35:05] 2026-01-10 08:34:05,911 | INFO     | executing command: df -mP /tmp/job_11011062/atlas/pilot/slots/0
[2026-01-10 09:35:05] 2026-01-10 08:34:05,916 | INFO     | sufficient remaining disk space (226942255104 B)
[2026-01-10 09:35:05] 2026-01-10 08:34:05,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:35:05] 2026-01-10 08:34:05,917 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:35:05] 2026-01-10 08:34:05,917 | INFO     | update_server=False
[2026-01-10 09:35:05] 2026-01-10 08:34:05,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:35:05] 2026-01-10 08:34:05,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:35:05] 2026-01-10 08:34:05,926 | INFO     | all data control threads have been joined
[2026-01-10 09:35:05] 2026-01-10 08:34:05,948 | INFO     | all payload control threads have been joined
[2026-01-10 09:35:05] 2026-01-10 08:34:06,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:35:05] 2026-01-10 08:34:06,037 | INFO     | aborting loop
[2026-01-10 09:35:05] 2026-01-10 08:34:06,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:35:05] 2026-01-10 08:34:06,922 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:06,922 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:06,932 | INFO     | [data] control thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:06,953 | INFO     | [payload] control thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:07,042 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:07,099 | INFO     | all job control threads have been joined
[2026-01-10 09:35:05] 2026-01-10 08:34:07,099 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:07,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:35:05] 2026-01-10 08:34:07,448 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:07,864 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:08,044 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:08,104 | INFO     | [job] control thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:08,206 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:08,215 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:08,302 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:08,314 | INFO     | [job] validate thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:11,415 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:16,184 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:35:05] 2026-01-10 08:34:17,189 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:35:05] 2026-01-10 08:34:36,051 | INFO     | PID=821 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-10 09:35:05] 2026-01-10 08:34:36,052 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:35:05] 2026-01-10 08:34:36,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:35:05] 2026-01-10 08:34:36,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:35:05] 2026-01-10 08:34:58,836 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:35:05] 2026-01-10 08:35:00,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062920448)>']
[2026-01-10 09:35:05] 2026-01-10 08:35:01,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:35:05] 2026-01-10 08:35:01,177 | INFO     | [monitor] control thread has ended
[2026-01-10 09:35:05] 2026-01-10 08:35:05,803 | INFO     | all workflow threads have been joined
[2026-01-10 09:35:05] 2026-01-10 08:35:05,803 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:35:05] 2026-01-10 08:35:05,803 | INFO     | traces error code: 0
[2026-01-10 09:35:05] 2026-01-10 08:35:05,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:35:05] 2026-01-10 08:35:05,855 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:35:05] 2026-01-10 08:35:05,856 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:35:05] 2026-01-10 08:35:05,857 [wrapper] pilotpid: 821
[2026-01-10 09:35:05] 2026-01-10 08:35:05,859 [wrapper] Pilot exit status: 0
[2026-01-10 09:35:05] 2026-01-10 08:35:05,863 [wrapper] pandaids: 6963381646
[2026-01-10 09:35:05] 2026-01-10 08:35:05,882 [wrapper] cleanup supervisor_pilot  3447 822
[2026-01-10 09:35:05] 2026-01-10 08:35:05,883 [wrapper] Test setup, not cleaning
[2026-01-10 09:35:05] 2026-01-10 08:35:05,884 [wrapper] apfmon messages muted
[2026-01-10 09:35:05] 2026-01-10 08:35:05,885 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:35:05] 2026-01-10 08:35:05,886 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:35:05]  *** Error codes and diagnostics ***
[2026-01-10 09:35:05]     "exeErrorCode": 0,
[2026-01-10 09:35:05]     "exeErrorDiag": "",
[2026-01-10 09:35:05]     "pilotErrorCode": 0,
[2026-01-10 09:35:05]     "pilotErrorDiag": "",
[2026-01-10 09:35:05]  *** Listing of results directory ***
[2026-01-10 09:35:06] total 1164620
[2026-01-10 09:35:06] -rwx------ 1 mf493845 unix-user     36322 Jan  9 08:17 runpilot2-wrapper.sh
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user    579449 Jan  9 08:20 pilot3.tar.gz
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      5112 Jan  9 08:21 queuedata.json
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user       100 Jan 10 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:35:06] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 03:10 run_atlas
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user       105 Jan 10 03:10 job.xml
[2026-01-10 09:35:06] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:50 start_atlas.sh
[2026-01-10 09:35:06] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 04:50 shared
[2026-01-10 09:35:06] -rw-r--r-- 2 mf493845 unix-user    592616 Jan 10 04:50 input.tar.gz
[2026-01-10 09:35:06] -rw-r--r-- 2 mf493845 unix-user 392678259 Jan 10 04:50 EVNT.47962006._000117.pool.root.1
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user         0 Jan 10 04:50 boinc_setup_complete
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      6390 Jan 10 04:50 init_data.xml
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      8192 Jan 10 04:50 boinc_mmap_file
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user         0 Jan 10 04:50 boinc_lockfile
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      2893 Jan 10 04:50 pandaJob.out
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user    989374 Jan 10 04:50 agis_schedconf.cvmfs.json
[2026-01-10 09:35:06] drwx------ 5 mf493845 unix-user       440 Jan 10 04:50 pilot3
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user 788055055 Jan 10 09:33 HITS.47962010._001706.pool.root.1
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      1029 Jan 10 09:33 memory_monitor_summary.json
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user   1516240 Jan 10 09:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user   1552528 Jan 10 09:33 log.47962010._001706.job.log.tgz.1
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      8593 Jan 10 09:34 heartbeat.json
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user        95 Jan 10 09:34 pilot_heartbeat.json
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      4830 Jan 10 09:35 pilotlog.txt
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user   2419534 Jan 10 09:35 log.47962010._001706.job.log.1
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user       353 Jan 10 09:35 output.list
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user       620 Jan 10 09:35 runtime_log
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user   3993600 Jan 10 09:35 result.tar.gz
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user      9221 Jan 10 09:35 runtime_log.err
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user       651 Jan 10 09:35 pKeLDmRvLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEdmKDm5hGCVm.diag
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user     22128 Jan 10 09:35 stderr.txt
[2026-01-10 09:35:06] HITS file was successfully produced:
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user 788055055 Jan 10 09:33 shared/HITS.pool.root.1
[2026-01-10 09:35:06]  *** Contents of shared directory: ***
[2026-01-10 09:35:06] total 1157560
[2026-01-10 09:35:06] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 04:50 start_atlas.sh
[2026-01-10 09:35:06] -rw-r--r-- 2 mf493845 unix-user    592616 Jan 10 04:50 input.tar.gz
[2026-01-10 09:35:06] -rw-r--r-- 2 mf493845 unix-user 392678259 Jan 10 04:50 ATLAS.root_0
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user 788055055 Jan 10 09:33 HITS.pool.root.1
[2026-01-10 09:35:06] -rw------- 1 mf493845 unix-user   3993600 Jan 10 09:35 result.tar.gz
09:35:07 (29409): run_atlas exited; CPU time 130413.481718
09:35:07 (29409): called boinc_finish(0)

</stderr_txt>
]]>

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