Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:14 (406687): wrapper (7.7.26015): starting
18:06:14 (406687): wrapper: running run_atlas (--nthreads 2)
[2026-01-10 18:06:14] Arguments: --nthreads 2
[2026-01-10 18:06:14] Threads: 2
[2026-01-10 18:06:14] Checking for CVMFS
[2026-01-10 18:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 18:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 18:06:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 18:06:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 18:06:15] 2.9.2.0 4005512 3359 66296 154986 3 81 23803636 36864001 0 130560 0 1622168 99.985 125847 2564 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 18:06:15] CVMFS is ok
[2026-01-10 18:06:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 18:06:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 18:06:15] Further information can be found at the LHC@home message board.
[2026-01-10 18:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 18:06:15] Checking for apptainer binary...
[2026-01-10 18:06:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 18:06:15] Running /usr/bin/apptainer --version
[2026-01-10 18:06:15] apptainer version 1.4.1-1.1
[2026-01-10 18:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 18:06:15] thA334a
[2026-01-10 18:06:15] apptainer works
[2026-01-10 18:06:15] Set ATHENA_PROC_NUMBER=2
[2026-01-10 18:06:15] Set ATHENA_CORE_NUMBER=2
[2026-01-10 18:06:15] Starting ATLAS job with PandaID=6963152877
[2026-01-10 18:06:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 21:00:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 21:00:45] 2026-01-10 19:59:47,498 | INFO     | aborting loop
[2026-01-10 21:00:45] 2026-01-10 19:59:47,643 | INFO     | all data control threads have been joined
[2026-01-10 21:00:45] 2026-01-10 19:59:47,788 | INFO     | all payload control threads have been joined
[2026-01-10 21:00:45] 2026-01-10 19:59:48,051 | INFO     | all job control threads have been joined
[2026-01-10 21:00:45] 2026-01-10 19:59:48,503 | INFO     | [job] retrieve thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:48,504 | INFO     | [job] queue monitor thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:48,505 | INFO     | [job] job monitor thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:48,558 | INFO     | [payload] validate_post thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:48,649 | INFO     | [data] control thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:48,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 21:00:45] 2026-01-10 19:59:48,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 21:00:45] 2026-01-10 19:59:48,794 | INFO     | [payload] control thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:48,872 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:49,048 | INFO     | [job] validate thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:49,057 | INFO     | [job] control thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:49,060 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:49,206 | INFO     | [payload] failed_post thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:49,428 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:49,759 | INFO     | [data] copytool_in thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:50,757 | INFO     | [data] copytool_out thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:52,779 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 21:00:45] 2026-01-10 19:59:58,471 | INFO     | job.realtimelogging is not enabled
[2026-01-10 21:00:45] 2026-01-10 19:59:59,477 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 21:00:45] 2026-01-10 20:00:17,813 | INFO     | PID=410395 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 21:00:45] 2026-01-10 20:00:17,814 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 21:00:45] 2026-01-10 20:00:17,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 21:00:45] 2026-01-10 20:00:17,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 21:00:45] 2026-01-10 20:00:38,232 | INFO     | [monitor] cgroup control has ended
[2026-01-10 21:00:45] 2026-01-10 20:00:40,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380784920384)>', '<ExcThread(monitor, started 140379915540224)>']
[2026-01-10 21:00:45] 2026-01-10 20:00:40,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 21:00:45] 2026-01-10 20:00:40,938 | INFO     | [monitor] control thread has ended
[2026-01-10 21:00:45] 2026-01-10 20:00:45,139 | INFO     | all workflow threads have been joined
[2026-01-10 21:00:45] 2026-01-10 20:00:45,139 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 21:00:45] 2026-01-10 20:00:45,140 | INFO     | traces error code: 0
[2026-01-10 21:00:45] 2026-01-10 20:00:45,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 21:00:45] 2026-01-10 20:00:45,182 [wrapper] ==== pilot stdout END ====
[2026-01-10 21:00:45] 2026-01-10 20:00:45,185 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 21:00:45] 2026-01-10 20:00:45,187 [wrapper] pilotpid: 410395
[2026-01-10 21:00:45] 2026-01-10 20:00:45,189 [wrapper] Pilot exit status: 0
[2026-01-10 21:00:45] 2026-01-10 20:00:45,195 [wrapper] pandaids: 6963152877
[2026-01-10 21:00:45] 2026-01-10 20:00:45,209 [wrapper] cleanup supervisor_pilot  435948 410396
[2026-01-10 21:00:45] 2026-01-10 20:00:45,211 [wrapper] Test setup, not cleaning
[2026-01-10 21:00:45] 2026-01-10 20:00:45,213 [wrapper] apfmon messages muted
[2026-01-10 21:00:45] 2026-01-10 20:00:45,215 [wrapper] ==== wrapper stdout END ====
[2026-01-10 21:00:45] 2026-01-10 20:00:45,217 [wrapper] ==== wrapper stderr END ====
[2026-01-10 21:00:45]  *** Error codes and diagnostics ***
[2026-01-10 21:00:45]     "exeErrorCode": 0,
[2026-01-10 21:00:45]     "exeErrorDiag": "",
[2026-01-10 21:00:45]     "pilotErrorCode": 0,
[2026-01-10 21:00:45]     "pilotErrorDiag": "",
[2026-01-10 21:00:45]  *** Listing of results directory ***
[2026-01-10 21:00:45] total 438132
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-10 21:00:45] -rwx------ 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:09 queuedata.json
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc       100 Jan 10 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 21:00:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 18:06 run_atlas
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc       105 Jan 10 18:06 job.xml
[2026-01-10 21:00:45] -rw-r--r-- 2 boinc boinc 225858644 Jan 10 18:06 EVNT.47898824._001144.pool.root.1
[2026-01-10 21:00:45] -rw-r--r-- 2 boinc boinc    592396 Jan 10 18:06 input.tar.gz
[2026-01-10 21:00:45] -rw-r--r-- 2 boinc boinc     15847 Jan 10 18:06 start_atlas.sh
[2026-01-10 21:00:45] drwxrwx--x 2 boinc boinc      4096 Jan 10 18:06 shared
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc         0 Jan 10 18:06 boinc_setup_complete
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc      6207 Jan 10 18:06 init_data.xml
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc         0 Jan 10 18:06 boinc_lockfile
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc      2519 Jan 10 18:06 pandaJob.out
[2026-01-10 21:00:45] -rw------- 1 boinc boinc    989556 Jan 10 18:06 agis_schedconf.cvmfs.json
[2026-01-10 21:00:45] -rw------- 1 boinc boinc   1516240 Jan 10 18:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 21:00:45] drwx------ 5 boinc boinc      4096 Jan 10 18:06 pilot3
[2026-01-10 21:00:45] -rw------- 1 boinc boinc 215324956 Jan 10 20:59 HITS.47898826._029579.pool.root.1
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc       530 Jan 10 20:59 boinc_task_state.xml
[2026-01-10 21:00:45] -rw------- 1 boinc boinc      1011 Jan 10 20:59 memory_monitor_summary.json
[2026-01-10 21:00:45] -rw------- 1 boinc boinc    306765 Jan 10 20:59 log.47898826._029579.job.log.tgz.1
[2026-01-10 21:00:45] -rw------- 1 boinc boinc      7747 Jan 10 20:59 heartbeat.json
[2026-01-10 21:00:45] -rw------- 1 boinc boinc        95 Jan 10 21:00 pilot_heartbeat.json
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc      8192 Jan 10 21:00 boinc_mmap_file
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc        28 Jan 10 21:00 wrapper_checkpoint.txt
[2026-01-10 21:00:45] -rw------- 1 boinc boinc      4823 Jan 10 21:00 pilotlog.txt
[2026-01-10 21:00:45] -rw------- 1 boinc boinc   1478173 Jan 10 21:00 log.47898826._029579.job.log.1
[2026-01-10 21:00:45] -rw------- 1 boinc boinc       357 Jan 10 21:00 output.list
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc       620 Jan 10 21:00 runtime_log
[2026-01-10 21:00:45] -rw------- 1 boinc boinc   1802240 Jan 10 21:00 result.tar.gz
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc      8903 Jan 10 21:00 runtime_log.err
[2026-01-10 21:00:45] -rw------- 1 boinc boinc       662 Jan 10 21:00 Kg5LDmPi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmv6kKDmGbeNYn.diag
[2026-01-10 21:00:45] -rw-r--r-- 1 boinc boinc      7030 Jan 10 21:00 stderr.txt
[2026-01-10 21:00:45] HITS file was successfully produced:
[2026-01-10 21:00:45] -rw------- 1 boinc boinc 215324956 Jan 10 20:59 shared/HITS.pool.root.1
[2026-01-10 21:00:45]  *** Contents of shared directory: ***
[2026-01-10 21:00:45] total 433212
[2026-01-10 21:00:45] -rw-r--r-- 2 boinc boinc 225858644 Jan 10 18:06 ATLAS.root_0
[2026-01-10 21:00:45] -rw-r--r-- 2 boinc boinc    592396 Jan 10 18:06 input.tar.gz
[2026-01-10 21:00:45] -rw-r--r-- 2 boinc boinc     15847 Jan 10 18:06 start_atlas.sh
[2026-01-10 21:00:45] -rw------- 1 boinc boinc 215324956 Jan 10 20:59 HITS.pool.root.1
[2026-01-10 21:00:45] -rw------- 1 boinc boinc   1802240 Jan 10 21:00 result.tar.gz
21:00:46 (406687): run_atlas exited; CPU time 20299.093766
21:00:46 (406687): called boinc_finish(0)

</stderr_txt>
]]>

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