Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:10 (5994): wrapper (7.7.26015): starting
18:56:10 (5994): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 18:56:10] Arguments: --nthreads 12
[2026-01-09 18:56:10] Threads: 12
[2026-01-09 18:56:10] Checking for CVMFS
[2026-01-09 18:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:56:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:56:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:56:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:56:10] 2.11.2.0 3165 137350 100488 154961 1 59 14592761 20275200 1 130560 0 51248651 99.889 8143503 40757 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:56:10] CVMFS is ok
[2026-01-09 18:56:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:56:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:56:10] Further information can be found at the LHC@home message board.
[2026-01-09 18:56:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:56:10] Checking for apptainer binary...
[2026-01-09 18:56:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:56:10] Running /usr/bin/apptainer --version
[2026-01-09 18:56:10] apptainer version 1.3.2-1.el7
[2026-01-09 18:56:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:56:11] c-115-40.aglt2.org
[2026-01-09 18:56:11] apptainer works
[2026-01-09 18:56:11] Set ATHENA_PROC_NUMBER=12
[2026-01-09 18:56:11] Set ATHENA_CORE_NUMBER=12
[2026-01-09 18:56:11] Starting ATLAS job with PandaID=6963188591
[2026-01-09 18:56:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:27:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:27:41]  protocol_id=None
[2026-01-09 20:27:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 20:27:41]  replicas=None
[2026-01-09 20:27:41]  scope=mc23_13p6TeV
[2026-01-09 20:27:41]  status=None
[2026-01-09 20:27:41]  status_code=0
[2026-01-09 20:27:41]  storage_token=
[2026-01-09 20:27:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963188591/log.47898826._037678.job.log.tgz.1
[2026-01-09 20:27:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/03/log.47898826._037678.job.log.tgz.1
[2026-01-09 20:27:41]  workdir=None
[2026-01-09 20:27:41] ]
[2026-01-09 20:27:41] 2026-01-10 01:26:32,541 | INFO     | transferring file log.47898826._037678.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963188591/log.47898826._037678.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 20:27:41] 2026-01-10 01:26:32,541 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963188591/log.47898826._037678.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._037678.job
[2026-01-09 20:27:41] 2026-01-10 01:26:32,562 | INFO     | adding to output.list: log.47898826._037678.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/03/log.47898826._037678.job.log.tg
[2026-01-09 20:27:41] 2026-01-10 01:26:32,563 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 20:27:41] 2026-01-10 01:26:32,563 | INFO     | summary of transferred files:
[2026-01-09 20:27:41] 2026-01-10 01:26:32,563 | INFO     |  -- lfn=log.47898826._037678.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 20:27:41] 2026-01-10 01:26:32,564 | INFO     | stage-out finished correctly
[2026-01-09 20:27:41] 2026-01-10 01:26:33,011 | INFO     | time since job start (5407s) is within the limit (349056.0s)
[2026-01-09 20:27:41] 2026-01-10 01:26:34,904 | INFO     | monitor loop #405: job 0:6963188591 is in state 'finished'
[2026-01-09 20:27:41] 2026-01-10 01:26:34,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:27:41] 2026-01-10 01:26:35,017 | INFO     | time since job start (5409s) is within the limit (349056.0s)
[2026-01-09 20:27:41] 2026-01-10 01:26:36,076 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 20:27:41] 2026-01-10 01:26:36,149 | INFO     | job 6963188591 has state=finished
[2026-01-09 20:27:41] 2026-01-10 01:26:36,149 | INFO     | preparing for final server update for job 6963188591 in state='finished'
[2026-01-09 20:27:41] 2026-01-10 01:26:36,149 | INFO     | this job has now completed (state=finished)
[2026-01-09 20:27:41] 2026-01-10 01:26:36,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 20:27:41] 2026-01-10 01:26:36,150 | INFO     | log transfer has been attempted: DONE
[2026-01-09 20:27:41] 2026-01-10 01:26:36,150 | INFO     | job 6963188591 has finished - writing final server update
[2026-01-09 20:27:41] 2026-01-10 01:26:36,150 | INFO     | total number of processed events: 400 (read)
[2026-01-09 20:27:41] 2026-01-10 01:26:36,151 | INFO     | executing command: lscpu
[2026-01-09 20:27:41] 2026-01-10 01:26:36,186 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 20:27:41] 2026-01-10 01:26:37,023 | INFO     | time since job start (5411s) is within the limit (349056.0s)
[2026-01-09 20:27:41] 2026-01-10 01:26:37,407 | INFO     | monitor loop #406: job 0:6963188591 is in state 'finished'
[2026-01-09 20:27:41] 2026-01-10 01:26:37,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:27:41] 2026-01-10 01:26:39,029 | INFO     | time since job start (5413s) is within the limit (349056.0s)
[2026-01-09 20:27:41] 2026-01-10 01:26:39,910 | INFO     | monitor loop #407: job 0:6963188591 is in state 'finished'
[2026-01-09 20:27:41] 2026-01-10 01:26:39,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,856 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 20:27:41] 2026-01-10 01:26:40,860 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2026-01-09 20:27:41] 2026-01-10 01:26:40,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188591/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,864 | INFO     | extracted standard info from prmon json
[2026-01-09 20:27:41] 2026-01-10 01:26:40,864 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:27:41] 2026-01-10 01:26:40,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:27:41] 2026-01-10 01:26:40,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:27:41] 2026-01-10 01:26:40,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:27:41] 2026-01-10 01:26:40,866 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:27:41] 2026-01-10 01:26:40,866 | INFO     | sum of square deviations: 170944600.5
[2026-01-09 20:27:41] 2026-01-10 01:26:40,866 | INFO     | sum of deviations: -5580239862.0
[2026-01-09 20:27:41] 2026-01-10 01:26:40,866 | INFO     | mean x: 1768005790.5
[2026-01-09 20:27:41] 2026-01-10 01:26:40,866 | INFO     | mean y: 2726973.7317073173
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | intersect: 57716725307.331726
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | chi2: 0.06281118347589454
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | current memory leak: -32.64 B/s (using 82 data points, chi2=0.06)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | could have reported an average CPU frequency of 2193 MHz (6 samples)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | ..............................
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | . Timing measurements:
[2026-01-09 20:27:41] 2026-01-10 01:26:40,867 | INFO     | . get job = 0 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | . initial setup = 2 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | . payload setup = 6 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | . stage-in = 0 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | . payload execution = 5378 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | . stage-out = 0 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | . log creation = 0 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,868 | INFO     | ..............................
[2026-01-09 20:27:41] 2026-01-10 01:26:40,942 | INFO     | 
[2026-01-09 20:27:41] 2026-01-10 01:26:40,942 | INFO     | job summary report
[2026-01-09 20:27:41] 2026-01-10 01:26:40,942 | INFO     | --------------------------------------------------
[2026-01-09 20:27:41] 2026-01-10 01:26:40,942 | INFO     | PanDA job id: 6963188591
[2026-01-09 20:27:41] 2026-01-10 01:26:40,942 | INFO     | task id: 47898826
[2026-01-09 20:27:41] 2026-01-10 01:26:40,943 | INFO     | errors: (none)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:27:41] 2026-01-10 01:26:40,943 | INFO     | pilot state: finished 
[2026-01-09 20:27:41] 2026-01-10 01:26:40,943 | INFO     | transexitcode: 0
[2026-01-09 20:27:41] 2026-01-10 01:26:40,943 | INFO     | exeerrorcode: 0
[2026-01-09 20:27:41] 2026-01-10 01:26:40,943 | INFO     | exeerrordiag: 
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | exitcode: 0
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | exitmsg: OK
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | cpuconsumptiontime: 59532 s
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | nevents: 400
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | neventsw: 0
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | pid: 16058
[2026-01-09 20:27:41] 2026-01-10 01:26:40,944 | INFO     | pgrp: 16058
[2026-01-09 20:27:41] 2026-01-10 01:26:40,945 | INFO     | corecount: 12
[2026-01-09 20:27:41] 2026-01-10 01:26:40,945 | INFO     | event service: False
[2026-01-09 20:27:41] 2026-01-10 01:26:40,945 | INFO     | sizes: {0: 2283971, 1: 2283971, 5: 2284261, 11: 2284317, 5388: 2310821, 5390: 2319819, 5393: 2320003, 5398: 2320197}
[2026-01-09 20:27:41] 2026-01-10 01:26:40,945 | INFO     | --------------------------------------------------
[2026-01-09 20:27:41] 2026-01-10 01:26:40,945 | INFO     | 
[2026-01-09 20:27:41] 2026-01-10 01:26:40,945 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:27:41] 2026-01-10 01:26:40,968 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,969 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,969 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,969 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,972 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:27:41] 2026-01-10 01:26:40,972 | INFO     | job 6963188591 has completed (purged errors)
[2026-01-09 20:27:41] 2026-01-10 01:26:40,972 | INFO     | overall cleanup function is called
[2026-01-09 20:27:41] 2026-01-10 01:26:41,980 | INFO     | --- collectZombieJob: --- 10, [16058]
[2026-01-09 20:27:41] 2026-01-10 01:26:41,980 | INFO     | zombie collector waiting for pid 16058
[2026-01-09 20:27:41] 2026-01-10 01:26:41,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:27:41] 2026-01-10 01:26:41,980 | INFO     | collected zombie processes
[2026-01-09 20:27:41] 2026-01-10 01:26:41,980 | INFO     | will attempt to kill all subprocesses of pid=16058
[2026-01-09 20:27:41] 2026-01-10 01:26:42,064 | INFO     | process IDs to be killed: [16058] (in reverse order)
[2026-01-09 20:27:41] 2026-01-10 01:26:42,115 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:27:41] 2026-01-10 01:26:42,116 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:27:41] 2026-01-10 01:26:42,119 | INFO     | did not find any defunct processes belonging to 16058
[2026-01-09 20:27:41] 2026-01-10 01:26:42,122 | INFO     | did not find any defunct processes belonging to 16058
[2026-01-09 20:27:41] 2026-01-10 01:26:42,122 | INFO     | ready for new job
[2026-01-09 20:27:41] 2026-01-10 01:26:42,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:27:41] 2026-01-10 01:26:42,124 | INFO     | ***************************************
[2026-01-09 20:27:41] 2026-01-10 01:26:42,124 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:27:41] 2026-01-10 01:26:42,124 | INFO     | ***************************************
[2026-01-09 20:27:41] 2026-01-10 01:26:42,124 | INFO     | 
[2026-01-09 20:27:41] 2026-01-10 01:26:42,125 | INFO     | architecture information:
[2026-01-09 20:27:41] 2026-01-10 01:26:42,125 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:27:41] 2026-01-10 01:26:42,139 | INFO     | cat /etc/os-release:
[2026-01-09 20:27:41] NAME="CentOS Linux"
[2026-01-09 20:27:41] VERSION="7 (Core)"
[2026-01-09 20:27:41] ID="centos"
[2026-01-09 20:27:41] ID_LIKE="rhel fedora"
[2026-01-09 20:27:41] VERSION_ID="7"
[2026-01-09 20:27:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:27:41] ANSI_COLOR="0;31"
[2026-01-09 20:27:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:27:41] HOME_URL="https://www.centos.org/"
[2026-01-09 20:27:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:27:41] 
[2026-01-09 20:27:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:27:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:27:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:27:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:27:41] 
[2026-01-09 20:27:41] 2026-01-10 01:26:42,139 | INFO     | ***************************************
[2026-01-09 20:27:41] 2026-01-10 01:26:42,642 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:27:41] 2026-01-10 01:26:42,658 | INFO     | sufficient remaining disk space (18663604224 B)
[2026-01-09 20:27:41] 2026-01-10 01:26:42,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:27:41] 2026-01-10 01:26:42,662 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:27:41] 2026-01-10 01:26:42,662 | INFO     | update_server=False
[2026-01-09 20:27:41] 2026-01-10 01:26:42,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:27:41] 2026-01-10 01:26:42,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:27:41] 2026-01-10 01:26:42,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:27:41] 2026-01-10 01:26:43,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:27:41] 2026-01-10 01:26:43,338 | INFO     | all data control threads have been joined
[2026-01-09 20:27:41] 2026-01-10 01:26:43,373 | INFO     | all job control threads have been joined
[2026-01-09 20:27:41] 2026-01-10 01:26:43,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:27:41] 2026-01-10 01:26:43,424 | INFO     | aborting loop
[2026-01-09 20:27:41] 2026-01-10 01:26:43,570 | INFO     | all payload control threads have been joined
[2026-01-09 20:27:41] 2026-01-10 01:26:43,668 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:43,668 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,103 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,346 | INFO     | [data] control thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,378 | INFO     | [job] control thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,430 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,570 | INFO     | [job] validate thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,575 | INFO     | [payload] control thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,821 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,844 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:44,978 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:45,137 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:45,144 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:45,165 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:46,667 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:26:53,431 | INFO     | job.realtimelogging is not enabled
[2026-01-09 20:27:41] 2026-01-10 01:26:54,437 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:27:41] 2026-01-10 01:27:12,240 | INFO     | PID=9682 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 20:27:41] 2026-01-10 01:27:12,240 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:27:41] 2026-01-10 01:27:12,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:27:41] 2026-01-10 01:27:12,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:27:41] 2026-01-10 01:27:34,676 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:27:41] 2026-01-10 01:27:36,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384264206144)>', '<ExcThread(monitor, started 140383514240768)>']
[2026-01-09 20:27:41] 2026-01-10 01:27:36,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:27:41] 2026-01-10 01:27:36,358 | INFO     | [monitor] control thread has ended
[2026-01-09 20:27:41] 2026-01-10 01:27:41,303 | INFO     | all workflow threads have been joined
[2026-01-09 20:27:41] 2026-01-10 01:27:41,303 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:27:41] 2026-01-10 01:27:41,304 | INFO     | traces error code: 0
[2026-01-09 20:27:41] 2026-01-10 01:27:41,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:27:41] 2026-01-10 01:27:41,405 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:27:41] 2026-01-10 01:27:41,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:27:41] 2026-01-10 01:27:41,413 [wrapper] pilotpid: 9682
[2026-01-09 20:27:41] 2026-01-10 01:27:41,417 [wrapper] Pilot exit status: 0
[2026-01-09 20:27:41] 2026-01-10 01:27:41,432 [wrapper] pandaids: 6963188591
[2026-01-09 20:27:41] 2026-01-10 01:27:41,475 [wrapper] cleanup supervisor_pilot 27688 9683
[2026-01-09 20:27:41] 2026-01-10 01:27:41,479 [wrapper] Test setup, not cleaning
[2026-01-09 20:27:41] 2026-01-10 01:27:41,483 [wrapper] apfmon messages muted
[2026-01-09 20:27:41] 2026-01-10 01:27:41,486 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:27:41] 2026-01-10 01:27:41,490 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:27:41]  *** Error codes and diagnostics ***
[2026-01-09 20:27:41]     "exeErrorCode": 0,
[2026-01-09 20:27:41]     "exeErrorDiag": "",
[2026-01-09 20:27:41]     "pilotErrorCode": 0,
[2026-01-09 20:27:41]     "pilotErrorDiag": "",
[2026-01-09 20:27:41]  *** Listing of results directory ***
[2026-01-09 20:27:41] total 432736
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 20:27:41] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:27:41] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:56 run_atlas
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:56 job.xml
[2026-01-09 20:27:41] -rw-r--r-- 2 boincer umatlas 223304562 Jan  9 18:56 EVNT.47898824._001446.pool.root.1
[2026-01-09 20:27:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:56 start_atlas.sh
[2026-01-09 20:27:41] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:56 shared
[2026-01-09 20:27:41] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 18:56 input.tar.gz
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:56 boinc_lockfile
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 18:56 pandaJob.out
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas        57 Jan  9 18:56 setup.sh.local
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas    989374 Jan  9 18:56 agis_schedconf.cvmfs.json
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas   1516240 Jan  9 18:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:27:41] drwx------ 5 boincer umatlas      4096 Jan  9 18:56 pilot3
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 20:20 init_data.xml
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas 213580558 Jan  9 20:26 HITS.47898826._037678.pool.root.1
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas       529 Jan  9 20:26 boinc_task_state.xml
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas      1047 Jan  9 20:26 memory_monitor_summary.json
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas    385927 Jan  9 20:26 log.47898826._037678.job.log.tgz.1
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas        95 Jan  9 20:26 pilot_heartbeat.json
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas      7849 Jan  9 20:26 heartbeat.json
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 20:27 boinc_mmap_file
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas        27 Jan  9 20:27 wrapper_checkpoint.txt
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas      4817 Jan  9 20:27 pilotlog.txt
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas    775672 Jan  9 20:27 log.47898826._037678.job.log.1
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas       357 Jan  9 20:27 output.list
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas       620 Jan  9 20:27 runtime_log
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas   1177600 Jan  9 20:27 result.tar.gz
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas       659 Jan  9 20:27 WzNNDm8EJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJKmKDmxuEUzm.diag
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 20:27 runtime_log.err
[2026-01-09 20:27:41] -rw-r--r-- 1 boincer umatlas     21832 Jan  9 20:27 stderr.txt
[2026-01-09 20:27:41] HITS file was successfully produced:
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas 213580558 Jan  9 20:26 shared/HITS.pool.root.1
[2026-01-09 20:27:41]  *** Contents of shared directory: ***
[2026-01-09 20:27:41] total 428400
[2026-01-09 20:27:41] -rw-r--r-- 2 boincer umatlas 223304562 Jan  9 18:56 ATLAS.root_0
[2026-01-09 20:27:41] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:56 start_atlas.sh
[2026-01-09 20:27:41] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 18:56 input.tar.gz
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas 213580558 Jan  9 20:26 HITS.pool.root.1
[2026-01-09 20:27:41] -rw------- 1 boincer umatlas   1177600 Jan  9 20:27 result.tar.gz
20:27:43 (5994): run_atlas exited; CPU time 59503.344703
20:27:43 (5994): called boinc_finish(0)

</stderr_txt>
]]>

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