Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:24:05 (4003150): wrapper (7.7.26015): starting
08:24:05 (4003150): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 08:24:05] Arguments: --nthreads 12
[2026-01-10 08:24:05] Threads: 12
[2026-01-10 08:24:05] Checking for CVMFS
[2026-01-10 08:24:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:24:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:24:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:24:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:24:05] 2.13.3.0 1986196 3976 84428 154972 1 97 3487613 4097025 1043 130560 0 4955444 99.993 150997 8100 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-10 08:24:05] CVMFS is ok
[2026-01-10 08:24:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:24:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:24:05] Further information can be found at the LHC@home message board.
[2026-01-10 08:24:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:24:05] Checking for apptainer binary...
[2026-01-10 08:24:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:24:05] Running /usr/bin/apptainer --version
[2026-01-10 08:24:05] apptainer version 1.4.4-1.el9
[2026-01-10 08:24:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:24:06] pckelar7.cern.ch
[2026-01-10 08:24:06] apptainer works
[2026-01-10 08:24:06] Set ATHENA_PROC_NUMBER=12
[2026-01-10 08:24:06] Set ATHENA_CORE_NUMBER=12
[2026-01-10 08:24:06] Starting ATLAS job with PandaID=6962320607
[2026-01-10 08:24:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:25:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:25:43] 2026-01-10 10:25:11,199 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 11:25:43] 2026-01-10 10:25:11,205 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.726958333333
[2026-01-10 11:25:43] 2026-01-10 10:25:11,210 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6962320607/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,211 | INFO     | extracted standard info from prmon json
[2026-01-10 11:25:43] 2026-01-10 10:25:11,211 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:25:43] 2026-01-10 10:25:11,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:25:43] 2026-01-10 10:25:11,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:25:43] 2026-01-10 10:25:11,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:25:43] 2026-01-10 10:25:11,218 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:25:43] 2026-01-10 10:25:11,219 | INFO     | sum of square deviations: 1748737904.5
[2026-01-10 11:25:43] 2026-01-10 10:25:11,220 | INFO     | sum of deviations: -41224020423.50001
[2026-01-10 11:25:43] 2026-01-10 10:25:11,220 | INFO     | mean x: 1768035285.5
[2026-01-10 11:25:43] 2026-01-10 10:25:11,220 | INFO     | mean y: 2794086.758426966
[2026-01-10 11:25:43] 2026-01-10 10:25:11,221 | INFO     | intersect: 41681722948.176414
[2026-01-10 11:25:43] 2026-01-10 10:25:11,221 | INFO     | chi2: 2.481231173727617
[2026-01-10 11:25:43] 2026-01-10 10:25:11,222 | INFO     | sum of square deviations: 1605470102.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,223 | INFO     | sum of deviations: -27405829717.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,223 | INFO     | mean x: 1768035133.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,223 | INFO     | mean y: 2808498.2485549133
[2026-01-10 11:25:43] 2026-01-10 10:25:11,223 | INFO     | intersect: 30183669374.019287
[2026-01-10 11:25:43] 2026-01-10 10:25:11,224 | INFO     | chi2: 1.7927140711530705
[2026-01-10 11:25:43] 2026-01-10 10:25:11,224 | INFO     | current chi2=1.7927140711530705 (change=27.749010647007538 %)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,225 | INFO     | sum of square deviations: 1470248962.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,226 | INFO     | sum of deviations: -26018160115.000004
[2026-01-10 11:25:43] 2026-01-10 10:25:11,226 | INFO     | mean x: 1768034980.5
[2026-01-10 11:25:43] 2026-01-10 10:25:11,226 | INFO     | mean y: 2810063.8333333335
[2026-01-10 11:25:43] 2026-01-10 10:25:11,226 | INFO     | intersect: 31290720071.260975
[2026-01-10 11:25:43] 2026-01-10 10:25:11,227 | INFO     | chi2: 1.789472612782491
[2026-01-10 11:25:43] 2026-01-10 10:25:11,227 | INFO     | current chi2=1.789472612782491 (change=0.18081290389463175 %)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,227 | INFO     | right removable region: 167
[2026-01-10 11:25:43] 2026-01-10 10:25:11,228 | INFO     | sum of square deviations: 1605470102.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,229 | INFO     | sum of deviations: -70668188778.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,229 | INFO     | mean x: 1768035438.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,229 | INFO     | mean y: 2825032.2485549133
[2026-01-10 11:25:43] 2026-01-10 10:25:11,230 | INFO     | intersect: 77826673600.42195
[2026-01-10 11:25:43] 2026-01-10 10:25:11,230 | INFO     | chi2: 1.02732520184097
[2026-01-10 11:25:43] 2026-01-10 10:25:11,230 | INFO     | current chi2=1.02732520184097 (change=58.59615126882382 %)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,231 | INFO     | sum of square deviations: 1470248962.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,232 | INFO     | sum of deviations: -69501906384.5
[2026-01-10 11:25:43] 2026-01-10 10:25:11,232 | INFO     | mean x: 1768035590.5
[2026-01-10 11:25:43] 2026-01-10 10:25:11,232 | INFO     | mean y: 2823625.625
[2026-01-10 11:25:43] 2026-01-10 10:25:11,233 | INFO     | intersect: 83581759759.1607
[2026-01-10 11:25:43] 2026-01-10 10:25:11,233 | INFO     | chi2: 0.9897290134402582
[2026-01-10 11:25:43] 2026-01-10 10:25:11,233 | INFO     | current chi2=0.9897290134402582 (change=3.6596190119096934 %)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,233 | INFO     | left removable region: 20
[2026-01-10 11:25:43] 2026-01-10 10:25:11,234 | INFO     | sum of square deviations: 984941258.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,235 | INFO     | sum of deviations: -40075113208.99999
[2026-01-10 11:25:43] 2026-01-10 10:25:11,235 | INFO     | mean x: 1768035560.0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,235 | INFO     | mean y: 2824766.394557823
[2026-01-10 11:25:43] 2026-01-10 10:25:11,236 | INFO     | intersect: 71940338449.60927
[2026-01-10 11:25:43] 2026-01-10 10:25:11,236 | INFO     | chi2: 0.2523652475912693
[2026-01-10 11:25:43] 2026-01-10 10:25:11,236 | INFO     | current memory leak: -40.69 B/s (using 147 data points, chi2=0.25)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,237 | INFO     | could have reported an average CPU frequency of 2808 MHz (9 samples)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,237 | INFO     | ..............................
[2026-01-10 11:25:43] 2026-01-10 10:25:11,237 | INFO     | . Timing measurements:
[2026-01-10 11:25:43] 2026-01-10 10:25:11,237 | INFO     | . get job = 0 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,237 | INFO     | . initial setup = 1 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,238 | INFO     | . payload setup = 8 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,238 | INFO     | . stage-in = 0 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,238 | INFO     | . payload execution = 10812 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,238 | INFO     | . stage-out = 1 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,238 | INFO     | . log creation = 0 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,239 | INFO     | ..............................
[2026-01-10 11:25:43] 2026-01-10 10:25:11,397 | INFO     | 
[2026-01-10 11:25:43] 2026-01-10 10:25:11,398 | INFO     | job summary report
[2026-01-10 11:25:43] 2026-01-10 10:25:11,398 | INFO     | --------------------------------------------------
[2026-01-10 11:25:43] 2026-01-10 10:25:11,398 | INFO     | PanDA job id: 6962320607
[2026-01-10 11:25:43] 2026-01-10 10:25:11,398 | INFO     | task id: 47898826
[2026-01-10 11:25:43] 2026-01-10 10:25:11,398 | INFO     | errors: (none)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,398 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:25:43] 2026-01-10 10:25:11,399 | INFO     | pilot state: finished 
[2026-01-10 11:25:43] 2026-01-10 10:25:11,399 | INFO     | transexitcode: 0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,399 | INFO     | exeerrorcode: 0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,399 | INFO     | exeerrordiag: 
[2026-01-10 11:25:43] 2026-01-10 10:25:11,399 | INFO     | exitcode: 0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,399 | INFO     | exitmsg: OK
[2026-01-10 11:25:43] 2026-01-10 10:25:11,400 | INFO     | cpuconsumptiontime: 121486 s
[2026-01-10 11:25:43] 2026-01-10 10:25:11,400 | INFO     | nevents: 400
[2026-01-10 11:25:43] 2026-01-10 10:25:11,400 | INFO     | neventsw: 0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,400 | INFO     | pid: 4014508
[2026-01-10 11:25:43] 2026-01-10 10:25:11,400 | INFO     | pgrp: 4014508
[2026-01-10 11:25:43] 2026-01-10 10:25:11,400 | INFO     | corecount: 12
[2026-01-10 11:25:43] 2026-01-10 10:25:11,401 | INFO     | event service: False
[2026-01-10 11:25:43] 2026-01-10 10:25:11,401 | INFO     | sizes: {0: 2283141, 1: 2283997, 2: 2283997, 6: 2284287, 12: 2284315, 10825: 2313344, 10827: 2322342, 10829: 2322398, 10838: 2322656}
[2026-01-10 11:25:43] 2026-01-10 10:25:11,401 | INFO     | --------------------------------------------------
[2026-01-10 11:25:43] 2026-01-10 10:25:11,401 | INFO     | 
[2026-01-10 11:25:43] 2026-01-10 10:25:11,401 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-10 11:25:43] 2026-01-10 10:25:11,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,422 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,422 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,425 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:25:43] 2026-01-10 10:25:11,425 | INFO     | job 6962320607 has completed (purged errors)
[2026-01-10 11:25:43] 2026-01-10 10:25:11,425 | INFO     | overall cleanup function is called
[2026-01-10 11:25:43] 2026-01-10 10:25:12,434 | INFO     | --- collectZombieJob: --- 10, [4014508]
[2026-01-10 11:25:43] 2026-01-10 10:25:12,434 | INFO     | zombie collector waiting for pid 4014508
[2026-01-10 11:25:43] 2026-01-10 10:25:12,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:25:43] 2026-01-10 10:25:12,434 | INFO     | collected zombie processes
[2026-01-10 11:25:43] 2026-01-10 10:25:12,435 | INFO     | will attempt to kill all subprocesses of pid=4014508
[2026-01-10 11:25:43] 2026-01-10 10:25:12,619 | INFO     | process IDs to be killed: [4014508] (in reverse order)
[2026-01-10 11:25:43] 2026-01-10 10:25:12,679 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:25:43] 2026-01-10 10:25:12,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:25:43] 2026-01-10 10:25:12,686 | INFO     | did not find any defunct processes belonging to 4014508
[2026-01-10 11:25:43] 2026-01-10 10:25:12,693 | INFO     | did not find any defunct processes belonging to 4014508
[2026-01-10 11:25:43] 2026-01-10 10:25:12,693 | INFO     | ready for new job
[2026-01-10 11:25:43] 2026-01-10 10:25:12,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:25:43] 2026-01-10 10:25:12,695 | INFO     | ***************************************
[2026-01-10 11:25:43] 2026-01-10 10:25:12,696 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:25:43] 2026-01-10 10:25:12,696 | INFO     | ***************************************
[2026-01-10 11:25:43] 2026-01-10 10:25:12,696 | INFO     | 
[2026-01-10 11:25:43] 2026-01-10 10:25:12,697 | INFO     | architecture information:
[2026-01-10 11:25:43] 2026-01-10 10:25:12,698 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:25:43] 2026-01-10 10:25:12,713 | INFO     | cat /etc/os-release:
[2026-01-10 11:25:43] NAME="CentOS Linux"
[2026-01-10 11:25:43] VERSION="7 (Core)"
[2026-01-10 11:25:43] ID="centos"
[2026-01-10 11:25:43] ID_LIKE="rhel fedora"
[2026-01-10 11:25:43] VERSION_ID="7"
[2026-01-10 11:25:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:25:43] ANSI_COLOR="0;31"
[2026-01-10 11:25:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:25:43] HOME_URL="https://www.centos.org/"
[2026-01-10 11:25:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:25:43] 
[2026-01-10 11:25:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:25:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:25:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:25:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:25:43] 
[2026-01-10 11:25:43] 2026-01-10 10:25:12,713 | INFO     | ***************************************
[2026-01-10 11:25:43] 2026-01-10 10:25:13,216 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-10 11:25:43] 2026-01-10 10:25:13,233 | INFO     | sufficient remaining disk space (1785854951424 B)
[2026-01-10 11:25:43] 2026-01-10 10:25:13,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:25:43] 2026-01-10 10:25:13,234 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:25:43] 2026-01-10 10:25:13,234 | INFO     | update_server=False
[2026-01-10 11:25:43] 2026-01-10 10:25:13,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:25:43] 2026-01-10 10:25:13,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:25:43] 2026-01-10 10:25:13,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:25:43] 2026-01-10 10:25:13,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:25:43] 2026-01-10 10:25:13,694 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 11:25:43] 2026-01-10 10:25:13,694 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 11:25:43] 2026-01-10 10:25:13,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:25:43] 2026-01-10 10:25:13,694 | INFO     | will abort loop
[2026-01-10 11:25:43] 2026-01-10 10:25:13,985 | INFO     | all payload control threads have been joined
[2026-01-10 11:25:43] 2026-01-10 10:25:14,154 | INFO     | all data control threads have been joined
[2026-01-10 11:25:43] 2026-01-10 10:25:14,239 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,240 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,320 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,435 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,479 | INFO     | all job control threads have been joined
[2026-01-10 11:25:43] 2026-01-10 10:25:14,502 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,590 | INFO     | [job] validate thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,700 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,726 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,915 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:14,990 | INFO     | [payload] control thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:15,160 | INFO     | [data] control thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:15,199 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:15,241 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:15,485 | INFO     | [job] control thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:15,607 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:17,241 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:25:43] 2026-01-10 10:25:34,065 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:25:43] 2026-01-10 10:25:35,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044503385920)>', '<ExcThread(monitor, started 140044002105088)>']
[2026-01-10 11:25:43] 2026-01-10 10:25:40,850 | INFO     | all workflow threads have been joined
[2026-01-10 11:25:43] 2026-01-10 10:25:40,850 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:25:43] 2026-01-10 10:25:40,851 | INFO     | traces error code: 0
[2026-01-10 11:25:43] 2026-01-10 10:25:40,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:25:43] 2026-01-10 10:25:43,235 | INFO     | PID=4007010 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:25:43] 2026-01-10 10:25:43,236 | INFO     | .. there are 2 such processes running
[2026-01-10 11:25:43] 2026-01-10 10:25:43,237 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:25:43] 2026-01-10 10:25:43,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:25:43] 2026-01-10 10:25:43,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:25:43] 2026-01-10 10:25:43,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:25:43] 2026-01-10 10:25:43,237 | INFO     | [monitor] control thread has ended
[2026-01-10 11:25:43] 2026-01-10 10:25:43,374 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:25:43] 2026-01-10 10:25:43,377 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:25:43] 2026-01-10 10:25:43,380 [wrapper] pilotpid: 4007010
[2026-01-10 11:25:43] 2026-01-10 10:25:43,383 [wrapper] Pilot exit status: 0
[2026-01-10 11:25:43] 2026-01-10 10:25:43,393 [wrapper] pandaids: 6962320607
[2026-01-10 11:25:43] 2026-01-10 10:25:43,430 [wrapper] cleanup supervisor_pilot 4070691 4007011
[2026-01-10 11:25:43] 2026-01-10 10:25:43,433 [wrapper] Test setup, not cleaning
[2026-01-10 11:25:43] 2026-01-10 10:25:43,436 [wrapper] apfmon messages muted
[2026-01-10 11:25:43] 2026-01-10 10:25:43,439 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:25:43] 2026-01-10 10:25:43,442 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:25:43]  *** Error codes and diagnostics ***
[2026-01-10 11:25:43]     "exeErrorCode": 0,
[2026-01-10 11:25:43]     "exeErrorDiag": "",
[2026-01-10 11:25:43]     "pilotErrorCode": 0,
[2026-01-10 11:25:43]     "pilotErrorDiag": "",
[2026-01-10 11:25:43]  *** Listing of results directory ***
[2026-01-10 11:25:43] total 445184
[2026-01-10 11:25:43] -rwx------ 1 boinc boinc     36322 Jan  7 22:00 runpilot2-wrapper.sh
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:05 queuedata.json
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc       100 Jan 10 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:25:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 08:24 run_atlas
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc       105 Jan 10 08:24 job.xml
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc      6251 Jan 10 08:24 init_data.xml
[2026-01-10 11:25:43] -rw-r--r-- 2 boinc boinc 223727161 Jan 10 08:24 EVNT.47898824._000676.pool.root.1
[2026-01-10 11:25:43] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:24 start_atlas.sh
[2026-01-10 11:25:43] drwxrwx--x 2 boinc boinc      4096 Jan 10 08:24 shared
[2026-01-10 11:25:43] -rw-r--r-- 2 boinc boinc    592400 Jan 10 08:24 input.tar.gz
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc         0 Jan 10 08:24 boinc_lockfile
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc      2519 Jan 10 08:24 pandaJob.out
[2026-01-10 11:25:43] -rw------- 1 boinc boinc    989374 Jan 10 08:24 agis_schedconf.cvmfs.json
[2026-01-10 11:25:43] drwx------ 5 boinc boinc      4096 Jan 10 08:24 pilot3
[2026-01-10 11:25:43] -rw------- 1 boinc boinc 224237335 Jan 10 11:24 HITS.47898826._014420.pool.root.1
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc       531 Jan 10 11:24 boinc_task_state.xml
[2026-01-10 11:25:43] -rw------- 1 boinc boinc      1017 Jan 10 11:24 memory_monitor_summary.json
[2026-01-10 11:25:43] -rw------- 1 boinc boinc   1516240 Jan 10 11:24 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:25:43] -rw------- 1 boinc boinc    464669 Jan 10 11:24 log.47898826._014420.job.log.tgz.1
[2026-01-10 11:25:43] -rw------- 1 boinc boinc        95 Jan 10 11:25 pilot_heartbeat.json
[2026-01-10 11:25:43] -rw------- 1 boinc boinc      7802 Jan 10 11:25 heartbeat.json
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:25 boinc_mmap_file
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc        29 Jan 10 11:25 wrapper_checkpoint.txt
[2026-01-10 11:25:43] -rw------- 1 boinc boinc       822 Jan 10 11:25 pilotlog.txt
[2026-01-10 11:25:43] -rw------- 1 boinc boinc   1529810 Jan 10 11:25 log.47898826._014420.job.log.1
[2026-01-10 11:25:43] -rw------- 1 boinc boinc       357 Jan 10 11:25 output.list
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc       620 Jan 10 11:25 runtime_log
[2026-01-10 11:25:43] -rw------- 1 boinc boinc   2017280 Jan 10 11:25 result.tar.gz
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc      8842 Jan 10 11:25 runtime_log.err
[2026-01-10 11:25:43] -rw------- 1 boinc boinc       662 Jan 10 11:25 00vNDmiopx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrwiKDmvE2IQo.diag
[2026-01-10 11:25:43] -rw-r--r-- 1 boinc boinc     21076 Jan 10 11:25 stderr.txt
[2026-01-10 11:25:43] HITS file was successfully produced:
[2026-01-10 11:25:43] -rw------- 1 boinc boinc 224237335 Jan 10 11:24 shared/HITS.pool.root.1
[2026-01-10 11:25:43]  *** Contents of shared directory: ***
[2026-01-10 11:25:43] total 440044
[2026-01-10 11:25:43] -rw-r--r-- 2 boinc boinc 223727161 Jan 10 08:24 ATLAS.root_0
[2026-01-10 11:25:43] -rw-r--r-- 2 boinc boinc     15847 Jan 10 08:24 start_atlas.sh
[2026-01-10 11:25:43] -rw-r--r-- 2 boinc boinc    592400 Jan 10 08:24 input.tar.gz
[2026-01-10 11:25:43] -rw------- 1 boinc boinc 224237335 Jan 10 11:24 HITS.pool.root.1
[2026-01-10 11:25:43] -rw------- 1 boinc boinc   2017280 Jan 10 11:25 result.tar.gz
11:25:45 (4003150): run_atlas exited; CPU time 121656.078938
11:25:45 (4003150): called boinc_finish(0)

</stderr_txt>
]]>

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