Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:35:51 (178013): wrapper (7.7.26015): starting
19:35:51 (178013): wrapper: running run_atlas (--nthreads 10)
[2026-01-09 19:35:52] Arguments: --nthreads 10
[2026-01-09 19:35:52] Threads: 10
[2026-01-09 19:35:52] Checking for CVMFS
[2026-01-09 19:35:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:35:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:35:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:36:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:36:13] 2.13.3.0 14106 94088 161140 154962 0 407 34946245 40960000 34071 16776704 0 1065821313 99.713 814164072 48533 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:36:13] CVMFS is ok
[2026-01-09 19:36:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:36:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:36:13] Further information can be found at the LHC@home message board.
[2026-01-09 19:36:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:36:13] Checking for apptainer binary...
[2026-01-09 19:36:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:36:13] Running /usr/bin/apptainer --version
[2026-01-09 19:36:13] apptainer version 1.4.5-2.el9
[2026-01-09 19:36:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:36:13] c8-7-5.aglt2.org
[2026-01-09 19:36:13] apptainer works
[2026-01-09 19:36:14] Set ATHENA_PROC_NUMBER=10
[2026-01-09 19:36:14] Set ATHENA_CORE_NUMBER=10
[2026-01-09 19:36:14] Starting ATLAS job with PandaID=6963194222
[2026-01-09 19:36:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:26:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:26:23] 2026-01-10 03:25:17,508 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:26:23] 2026-01-10 03:25:17,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:26:23] 2026-01-10 03:25:17,510 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:26:23] 2026-01-10 03:25:17,510 | INFO     | sum of square deviations: 1342738849.6564376
[2026-01-09 22:26:23] 2026-01-10 03:25:17,511 | INFO     | sum of deviations: 177621519715.57043
[2026-01-09 22:26:23] 2026-01-10 03:25:17,511 | INFO     | mean x: 1768010508.2638037
[2026-01-09 22:26:23] 2026-01-10 03:25:17,511 | INFO     | mean y: 2859805.079754601
[2026-01-09 22:26:23] 2026-01-10 03:25:17,511 | INFO     | intersect: -233874869606.9102
[2026-01-09 22:26:23] 2026-01-10 03:25:17,511 | INFO     | chi2: 11.986915668751971
[2026-01-09 22:26:23] 2026-01-10 03:25:17,511 | INFO     | sum of square deviations: 1222946710.6835465
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | sum of deviations: 192578124863.7341
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | mean x: 1768010355.78481
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | mean y: 2878344.639240506
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | intersect: -278406733523.4006
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | chi2: 11.175887508330803
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | current chi2=11.175887508330803 (change=6.765945325997352 %)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | right removable region: 157
[2026-01-09 22:26:23] 2026-01-10 03:25:17,512 | INFO     | sum of square deviations: 1222850508.9177215
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | sum of deviations: 110161577283.72157
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | mean x: 1768010660.8037975
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | mean y: 2945598.7974683545
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | intersect: -159269869539.464
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | chi2: 6.421326348820304
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | current chi2=6.421326348820304 (change=46.43053704332212 %)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | sum of square deviations: 1110311142.6405284
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | sum of deviations: 49696226643.803925
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | mean x: 1768010813.3464053
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | mean y: 3027584.098039216
[2026-01-09 22:26:23] 2026-01-10 03:25:17,513 | INFO     | intersect: -79131066197.76138
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | chi2: 2.456739825092814
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | current chi2=2.456739825092814 (change=61.740928717255514 %)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | sum of square deviations: 1004906491.8108102
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | sum of deviations: 16114882055.689196
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | mean x: 1768010965.8783784
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | mean y: 3075673.871621622
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | intersect: -28349102783.006283
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | chi2: 0.989413760257031
[2026-01-09 22:26:23] 2026-01-10 03:25:17,514 | INFO     | current chi2=0.989413760257031 (change=59.726555081197844 %)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | sum of square deviations: 906540469.6643332
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | sum of deviations: 10205244528.678324
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | mean x: 1768011118.2937062
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | mean y: 3084784.5314685316
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | intersect: -19900037464.704803
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | chi2: 0.9717387934291595
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | current chi2=0.9717387934291595 (change=1.7864080264337425 %)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | left removable region: 40
[2026-01-09 22:26:23] 2026-01-10 03:25:17,515 | INFO     | sum of square deviations: 496550653.2991453
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | sum of deviations: 18337059278.205128
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | mean x: 1768011545.2393162
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | mean y: 3132764.564102564
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | intersect: -65287552675.48301
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | chi2: 0.004427692139014427
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | current memory leak: 36.93 B/s (using 117 data points, chi2=0.00)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | ..............................
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . Timing measurements:
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . get job = 0 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . initial setup = 4 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . payload setup = 45 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . stage-in = 0 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . payload execution = 9973 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . stage-out = 0 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,516 | INFO     | . log creation = 0 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,517 | INFO     | ..............................
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | 
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | job summary report
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | --------------------------------------------------
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | PanDA job id: 6963194222
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | task id: 47962010
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | errors: (none)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | pilot state: finished 
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | transexitcode: 0
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | exeerrorcode: 0
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | exeerrordiag: 
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | exitcode: 0
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | exitmsg: OK
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | cpuconsumptiontime: 71944 s
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | nevents: 450
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | neventsw: 0
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | pid: 224306
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | pgrp: 224306
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | corecount: 10
[2026-01-09 22:26:23] 2026-01-10 03:25:17,567 | INFO     | event service: False
[2026-01-09 22:26:23] 2026-01-10 03:25:17,568 | INFO     | sizes: {0: 2284449, 1: 2284648, 12: 2284648, 22: 2284676, 27: 2284966, 33: 2284994, 10023: 2314718, 10024: 2323712, 10025: 2323768, 10031: 2324078}
[2026-01-09 22:26:23] 2026-01-10 03:25:17,568 | INFO     | --------------------------------------------------
[2026-01-09 22:26:23] 2026-01-10 03:25:17,568 | INFO     | 
[2026-01-09 22:26:23] 2026-01-10 03:25:17,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-09 22:26:23] 2026-01-10 03:25:17,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | job 6963194222 has completed (purged errors)
[2026-01-09 22:26:23] 2026-01-10 03:25:17,585 | INFO     | overall cleanup function is called
[2026-01-09 22:26:23] 2026-01-10 03:25:18,601 | INFO     | --- collectZombieJob: --- 10, [224306]
[2026-01-09 22:26:23] 2026-01-10 03:25:18,601 | INFO     | zombie collector waiting for pid 224306
[2026-01-09 22:26:23] 2026-01-10 03:25:18,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:26:23] 2026-01-10 03:25:18,601 | INFO     | collected zombie processes
[2026-01-09 22:26:23] 2026-01-10 03:25:18,601 | INFO     | will attempt to kill all subprocesses of pid=224306
[2026-01-09 22:26:23] 2026-01-10 03:25:18,977 | INFO     | process IDs to be killed: [224306] (in reverse order)
[2026-01-09 22:26:23] 2026-01-10 03:25:19,125 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:26:23] 2026-01-10 03:25:19,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:26:23] 2026-01-10 03:25:19,148 | INFO     | did not find any defunct processes belonging to 224306
[2026-01-09 22:26:23] 2026-01-10 03:25:19,167 | INFO     | did not find any defunct processes belonging to 224306
[2026-01-09 22:26:23] 2026-01-10 03:25:19,168 | INFO     | ready for new job
[2026-01-09 22:26:23] 2026-01-10 03:25:19,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:26:23] 2026-01-10 03:25:19,169 | INFO     | ***************************************
[2026-01-09 22:26:23] 2026-01-10 03:25:19,171 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:26:23] 2026-01-10 03:25:19,171 | INFO     | ***************************************
[2026-01-09 22:26:23] 2026-01-10 03:25:19,171 | INFO     | 
[2026-01-09 22:26:23] 2026-01-10 03:25:19,175 | INFO     | architecture information:
[2026-01-09 22:26:23] 2026-01-10 03:25:19,175 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:26:23] 2026-01-10 03:25:19,188 | INFO     | cat /etc/os-release:
[2026-01-09 22:26:23] NAME="CentOS Linux"
[2026-01-09 22:26:23] VERSION="7 (Core)"
[2026-01-09 22:26:23] ID="centos"
[2026-01-09 22:26:23] ID_LIKE="rhel fedora"
[2026-01-09 22:26:23] VERSION_ID="7"
[2026-01-09 22:26:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:26:23] ANSI_COLOR="0;31"
[2026-01-09 22:26:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:26:23] HOME_URL="https://www.centos.org/"
[2026-01-09 22:26:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:26:23] 
[2026-01-09 22:26:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:26:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:26:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:26:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:26:23] 
[2026-01-09 22:26:23] 2026-01-10 03:25:19,188 | INFO     | ***************************************
[2026-01-09 22:26:23] 2026-01-10 03:25:19,691 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-09 22:26:23] 2026-01-10 03:25:19,707 | INFO     | sufficient remaining disk space (171615191040 B)
[2026-01-09 22:26:23] 2026-01-10 03:25:19,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:26:23] 2026-01-10 03:25:19,708 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:26:23] 2026-01-10 03:25:19,708 | INFO     | update_server=False
[2026-01-09 22:26:23] 2026-01-10 03:25:19,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:26:23] 2026-01-10 03:25:19,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:26:23] 2026-01-10 03:25:19,811 | INFO     | all data control threads have been joined
[2026-01-09 22:26:23] 2026-01-10 03:25:19,860 | INFO     | all job control threads have been joined
[2026-01-09 22:26:23] 2026-01-10 03:25:20,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:26:23] 2026-01-10 03:25:20,452 | INFO     | aborting loop
[2026-01-09 22:26:23] 2026-01-10 03:25:20,713 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:20,781 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:20,807 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:20,816 | INFO     | [data] control thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:20,865 | INFO     | [job] control thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:21,036 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:21,057 | INFO     | all payload control threads have been joined
[2026-01-09 22:26:23] 2026-01-10 03:25:21,058 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:21,278 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:21,457 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:21,714 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:21,954 | INFO     | [job] validate thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:22,062 | INFO     | [payload] control thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:22,252 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:22,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:26:23] 2026-01-10 03:25:22,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:26:23] 2026-01-10 03:25:23,584 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:26,499 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:29,760 | INFO     | job.realtimelogging is not enabled
[2026-01-09 22:26:23] 2026-01-10 03:25:30,765 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:26:23] 2026-01-10 03:25:51,091 | INFO     | PID=194007 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 22:26:23] 2026-01-10 03:25:51,092 | INFO     | .. there are 32 such processes running
[2026-01-09 22:26:23] 2026-01-10 03:25:51,092 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:26:23] 2026-01-10 03:25:51,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:26:23] 2026-01-10 03:25:51,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:26:23] 2026-01-10 03:26:17,747 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:26:23] 2026-01-10 03:26:18,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710281615168)>', '<ExcThread(monitor, started 140709931755264)>']
[2026-01-09 22:26:23] 2026-01-10 03:26:19,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:26:23] 2026-01-10 03:26:19,229 | INFO     | [monitor] control thread has ended
[2026-01-09 22:26:23] 2026-01-10 03:26:23,418 | INFO     | all workflow threads have been joined
[2026-01-09 22:26:23] 2026-01-10 03:26:23,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:26:23] 2026-01-10 03:26:23,418 | INFO     | traces error code: 0
[2026-01-09 22:26:23] 2026-01-10 03:26:23,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:26:23] 2026-01-10 03:26:23,508 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:26:23] 2026-01-10 03:26:23,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:26:23] 2026-01-10 03:26:23,511 [wrapper] pilotpid: 194007
[2026-01-09 22:26:23] 2026-01-10 03:26:23,513 [wrapper] Pilot exit status: 0
[2026-01-09 22:26:23] 2026-01-10 03:26:23,521 [wrapper] pandaids: 6963194222
[2026-01-09 22:26:23] 2026-01-10 03:26:23,631 [wrapper] cleanup supervisor_pilot 1796713 194008
[2026-01-09 22:26:23] 2026-01-10 03:26:23,634 [wrapper] Test setup, not cleaning
[2026-01-09 22:26:23] 2026-01-10 03:26:23,637 [wrapper] apfmon messages muted
[2026-01-09 22:26:23] 2026-01-10 03:26:23,641 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:26:23] 2026-01-10 03:26:23,643 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:26:23]  *** Error codes and diagnostics ***
[2026-01-09 22:26:23]     "exeErrorCode": 0,
[2026-01-09 22:26:23]     "exeErrorDiag": "",
[2026-01-09 22:26:23]     "pilotErrorCode": 0,
[2026-01-09 22:26:23]     "pilotErrorDiag": "",
[2026-01-09 22:26:23]  *** Listing of results directory ***
[2026-01-09 22:26:23] total 772020
[2026-01-09 22:26:23] -rwx------. 1 boincer umatlas     36322 Jan  9 02:16 runpilot2-wrapper.sh
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:20 queuedata.json
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:20 pilot3.tar.gz
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:26:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:35 run_atlas
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:35 job.xml
[2026-01-09 22:26:23] -rw-r--r--. 2 boincer umatlas 389451780 Jan  9 19:35 EVNT.47962006._000055.pool.root.1
[2026-01-09 22:26:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:35 start_atlas.sh
[2026-01-09 22:26:23] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:35 shared
[2026-01-09 22:26:23] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 19:35 input.tar.gz
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:35 boinc_lockfile
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas      2891 Jan  9 19:36 pandaJob.out
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas        57 Jan  9 19:36 setup.sh.local
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas    989374 Jan  9 19:36 agis_schedconf.cvmfs.json
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:26:23] drwx------. 5 boincer umatlas      4096 Jan  9 19:37 pilot3
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas      7172 Jan  9 22:18 init_data.xml
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas       530 Jan  9 22:20 boinc_task_state.xml
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas 391242994 Jan  9 22:24 HITS.47962010._000561.pool.root.1
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas        95 Jan  9 22:25 pilot_heartbeat.json
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas      1040 Jan  9 22:25 memory_monitor_summary.json
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas   1585485 Jan  9 22:25 log.47962010._000561.job.log.tgz.1
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas      8552 Jan  9 22:25 heartbeat.json
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:26 boinc_mmap_file
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas        27 Jan  9 22:26 wrapper_checkpoint.txt
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas      4896 Jan  9 22:26 pilotlog.txt
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas   1377088 Jan  9 22:26 log.47962010._000561.job.log.1
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas       353 Jan  9 22:26 output.list
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:26 runtime_log
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas   2979840 Jan  9 22:26 result.tar.gz
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas       655 Jan  9 22:26 XpdLDm3uLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNNhKDmuIJs6m.diag
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas      9335 Jan  9 22:26 runtime_log.err
[2026-01-09 22:26:23] -rw-r--r--. 1 boincer umatlas     21027 Jan  9 22:26 stderr.txt
[2026-01-09 22:26:23] HITS file was successfully produced:
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas 391242994 Jan  9 22:24 shared/HITS.pool.root.1
[2026-01-09 22:26:23]  *** Contents of shared directory: ***
[2026-01-09 22:26:23] total 765920
[2026-01-09 22:26:23] -rw-r--r--. 2 boincer umatlas 389451780 Jan  9 19:35 ATLAS.root_0
[2026-01-09 22:26:23] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:35 start_atlas.sh
[2026-01-09 22:26:23] -rw-r--r--. 2 boincer umatlas    592612 Jan  9 19:35 input.tar.gz
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas 391242994 Jan  9 22:24 HITS.pool.root.1
[2026-01-09 22:26:23] -rw-------. 1 boincer umatlas   2979840 Jan  9 22:26 result.tar.gz
22:26:25 (178013): run_atlas exited; CPU time 71965.259127
22:26:25 (178013): called boinc_finish(0)

</stderr_txt>
]]>

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