Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:00 (18981): wrapper (7.7.26015): starting
18:52:00 (18981): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:52:00] Arguments: --nthreads 8
[2026-01-09 18:52:00] Threads: 8
[2026-01-09 18:52:00] Checking for CVMFS
[2026-01-09 18:52:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:52:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:52:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:52:01] 2.11.2.0 2804 126570 115728 154961 0 58 18560058 20275200 1 130560 0 29467794 99.804 8620800 33024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:52:01] CVMFS is ok
[2026-01-09 18:52:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:52:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:52:01] Further information can be found at the LHC@home message board.
[2026-01-09 18:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:52:01] Checking for apptainer binary...
[2026-01-09 18:52:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:52:01] Running /usr/bin/apptainer --version
[2026-01-09 18:52:01] apptainer version 1.3.2-1.el7
[2026-01-09 18:52:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:52:02] c-204-28.aglt2.org
[2026-01-09 18:52:02] apptainer works
[2026-01-09 18:52:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:52:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:52:02] Starting ATLAS job with PandaID=6963381820
[2026-01-09 18:52:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:48:10 (6121): wrapper (7.7.26015): starting
06:48:10 (6121): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 06:48:10] Arguments: --nthreads 8
[2026-01-10 06:48:10] Threads: 8
[2026-01-10 06:48:10] This job has been restarted, cleaning up previous attempt
[2026-01-10 06:48:10] Checking for CVMFS
[2026-01-10 06:48:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:48:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:48:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:48:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:48:11] 2.11.2.0 2804 127286 116100 154978 1 57 10167278 20275201 1 130560 0 29695068 99.789 8935330 33140 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 06:48:11] CVMFS is ok
[2026-01-10 06:48:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 06:48:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 06:48:11] Further information can be found at the LHC@home message board.
[2026-01-10 06:48:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:48:11] Checking for apptainer binary...
[2026-01-10 06:48:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:48:11] Running /usr/bin/apptainer --version
[2026-01-10 06:48:11] apptainer version 1.3.2-1.el7
[2026-01-10 06:48:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:48:13] c-204-28.aglt2.org
[2026-01-10 06:48:13] apptainer works
[2026-01-10 06:48:13] Set ATHENA_PROC_NUMBER=8
[2026-01-10 06:48:13] Set ATHENA_CORE_NUMBER=8
[2026-01-10 06:48:13] Starting ATLAS job with PandaID=6963381820
[2026-01-10 06:48:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:07:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:07:07] 2026-01-11 01:06:33,618 | INFO     | time since job start (47881s) is within the limit (349056.0s)
[2026-01-10 20:07:07] 2026-01-11 01:06:33,902 | INFO     | monitor loop #3532: job 0:6963381820 is in state 'finished'
[2026-01-10 20:07:07] 2026-01-11 01:06:33,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,068 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 20:07:07] 2026-01-11 01:06:34,071 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2026-01-10 20:07:07] 2026-01-11 01:06:34,073 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963381820/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,074 | INFO     | extracted standard info from prmon json
[2026-01-10 20:07:07] 2026-01-11 01:06:34,074 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:07:07] 2026-01-11 01:06:34,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:07:07] 2026-01-11 01:06:34,088 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:07:07] 2026-01-11 01:06:34,089 | INFO     | sum of square deviations: 149998438140.8202
[2026-01-10 20:07:07] 2026-01-11 01:06:34,101 | INFO     | sum of deviations: 1006440973915.4161
[2026-01-10 20:07:07] 2026-01-11 01:06:34,101 | INFO     | mean x: 1768069657.5426753
[2026-01-10 20:07:07] 2026-01-11 01:06:34,101 | INFO     | mean y: 2857697.315923567
[2026-01-10 20:07:07] 2026-01-11 01:06:34,102 | INFO     | intersect: -11860317480.661407
[2026-01-10 20:07:07] 2026-01-11 01:06:34,102 | INFO     | chi2: 6.082803015862928
[2026-01-10 20:07:07] 2026-01-11 01:06:34,103 | INFO     | sum of square deviations: 147150570484.33847
[2026-01-10 20:07:07] 2026-01-11 01:06:34,115 | INFO     | sum of deviations: 1243460166505.4915
[2026-01-10 20:07:07] 2026-01-11 01:06:34,116 | INFO     | mean x: 1768069505.0461538
[2026-01-10 20:07:07] 2026-01-11 01:06:34,116 | INFO     | mean y: 2870379.264102564
[2026-01-10 20:07:07] 2026-01-11 01:06:34,116 | INFO     | intersect: -14937771671.267164
[2026-01-10 20:07:07] 2026-01-11 01:06:34,117 | INFO     | chi2: 3.3716266811675943
[2026-01-10 20:07:07] 2026-01-11 01:06:34,117 | INFO     | current chi2=3.3716266811675943 (change=44.57116772686936 %)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,118 | INFO     | sum of square deviations: 144338982577.83746
[2026-01-10 20:07:07] 2026-01-11 01:06:34,130 | INFO     | sum of deviations: 1346142403745.275
[2026-01-10 20:07:07] 2026-01-11 01:06:34,130 | INFO     | mean x: 1768069352.5496774
[2026-01-10 20:07:07] 2026-01-11 01:06:34,130 | INFO     | mean y: 2875944.499354839
[2026-01-10 20:07:07] 2026-01-11 01:06:34,130 | INFO     | intersect: -16486592705.773804
[2026-01-10 20:07:07] 2026-01-11 01:06:34,131 | INFO     | chi2: 2.7518483952849597
[2026-01-10 20:07:07] 2026-01-11 01:06:34,131 | INFO     | current chi2=2.7518483952849597 (change=18.382174080672698 %)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,131 | INFO     | right removable region: 774
[2026-01-10 20:07:07] 2026-01-11 01:06:34,132 | INFO     | sum of square deviations: 147150310624.33847
[2026-01-10 20:07:07] 2026-01-11 01:06:34,144 | INFO     | sum of deviations: 767222714248.8448
[2026-01-10 20:07:07] 2026-01-11 01:06:34,144 | INFO     | mean x: 1768069810.0461538
[2026-01-10 20:07:07] 2026-01-11 01:06:34,145 | INFO     | mean y: 2870495.532051282
[2026-01-10 20:07:07] 2026-01-11 01:06:34,145 | INFO     | intersect: -9215617137.212952
[2026-01-10 20:07:07] 2026-01-11 01:06:34,145 | INFO     | chi2: 3.5965612937614173
[2026-01-10 20:07:07] 2026-01-11 01:06:34,146 | INFO     | current chi2=3.5965612937614173 (change=40.87329008711625 %)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,146 | INFO     | sum of square deviations: 144338462857.83762
[2026-01-10 20:07:07] 2026-01-11 01:06:34,158 | INFO     | sum of deviations: 717164710139.5247
[2026-01-10 20:07:07] 2026-01-11 01:06:34,159 | INFO     | mean x: 1768069962.5496774
[2026-01-10 20:07:07] 2026-01-11 01:06:34,159 | INFO     | mean y: 2873209.7006451613
[2026-01-10 20:07:07] 2026-01-11 01:06:34,159 | INFO     | intersect: -8782015842.687424
[2026-01-10 20:07:07] 2026-01-11 01:06:34,160 | INFO     | chi2: 3.545228686040491
[2026-01-10 20:07:07] 2026-01-11 01:06:34,160 | INFO     | current chi2=3.545228686040491 (change=1.4272690920065165 %)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,160 | INFO     | left removable region: 20
[2026-01-10 20:07:07] 2026-01-11 01:06:34,161 | INFO     | sum of square deviations: 132920340935.19337
[2026-01-10 20:07:07] 2026-01-11 01:06:34,172 | INFO     | sum of deviations: 997766350048.6299
[2026-01-10 20:07:07] 2026-01-11 01:06:34,173 | INFO     | mean x: 1768069932.061008
[2026-01-10 20:07:07] 2026-01-11 01:06:34,173 | INFO     | mean y: 2896325.225464191
[2026-01-10 20:07:07] 2026-01-11 01:06:34,173 | INFO     | intersect: -13269118103.351389
[2026-01-10 20:07:07] 2026-01-11 01:06:34,174 | INFO     | chi2: 0.13455995704522503
[2026-01-10 20:07:07] 2026-01-11 01:06:34,174 | INFO     | current memory leak: 7.51 B/s (using 754 data points, chi2=0.13)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,174 | INFO     | could have reported an average CPU frequency of 2147 MHz (30 samples)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | ..............................
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . Timing measurements:
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . get job = 0 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . initial setup = 2 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . payload setup = 9 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . stage-in = 0 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . payload execution = 47838 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . stage-out = 3 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,175 | INFO     | . log creation = 0 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,176 | INFO     | ..............................
[2026-01-10 20:07:07] 2026-01-11 01:06:34,264 | INFO     | 
[2026-01-10 20:07:07] 2026-01-11 01:06:34,264 | INFO     | job summary report
[2026-01-10 20:07:07] 2026-01-11 01:06:34,264 | INFO     | --------------------------------------------------
[2026-01-10 20:07:07] 2026-01-11 01:06:34,265 | INFO     | PanDA job id: 6963381820
[2026-01-10 20:07:07] 2026-01-11 01:06:34,265 | INFO     | task id: 47962010
[2026-01-10 20:07:07] 2026-01-11 01:06:34,265 | INFO     | errors: (none)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,265 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:07:07] 2026-01-11 01:06:34,265 | INFO     | pilot state: finished 
[2026-01-10 20:07:07] 2026-01-11 01:06:34,265 | INFO     | transexitcode: 0
[2026-01-10 20:07:07] 2026-01-11 01:06:34,266 | INFO     | exeerrorcode: 0
[2026-01-10 20:07:07] 2026-01-11 01:06:34,266 | INFO     | exeerrordiag: 
[2026-01-10 20:07:07] 2026-01-11 01:06:34,266 | INFO     | exitcode: 0
[2026-01-10 20:07:07] 2026-01-11 01:06:34,266 | INFO     | exitmsg: OK
[2026-01-10 20:07:07] 2026-01-11 01:06:34,266 | INFO     | cpuconsumptiontime: 370520 s
[2026-01-10 20:07:07] 2026-01-11 01:06:34,266 | INFO     | nevents: 900
[2026-01-10 20:07:07] 2026-01-11 01:06:34,267 | INFO     | neventsw: 0
[2026-01-10 20:07:07] 2026-01-11 01:06:34,267 | INFO     | pid: 16613
[2026-01-10 20:07:07] 2026-01-11 01:06:34,267 | INFO     | pgrp: 16613
[2026-01-10 20:07:07] 2026-01-11 01:06:34,267 | INFO     | corecount: 8
[2026-01-10 20:07:07] 2026-01-11 01:06:34,267 | INFO     | event service: False
[2026-01-10 20:07:07] 2026-01-11 01:06:34,267 | INFO     | sizes: {0: 2284453, 1: 2284652, 7: 2284914, 11: 2284942, 47851: 2331993, 47852: 2331992, 47855: 2341226, 47864: 2341416}
[2026-01-10 20:07:07] 2026-01-11 01:06:34,268 | INFO     | --------------------------------------------------
[2026-01-10 20:07:07] 2026-01-11 01:06:34,268 | INFO     | 
[2026-01-10 20:07:07] 2026-01-11 01:06:34,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 20:07:07] 2026-01-11 01:06:34,295 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,295 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,296 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,296 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,298 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,299 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:07:07] 2026-01-11 01:06:34,299 | INFO     | job 6963381820 has completed (purged errors)
[2026-01-10 20:07:07] 2026-01-11 01:06:34,299 | INFO     | overall cleanup function is called
[2026-01-10 20:07:07] 2026-01-11 01:06:35,313 | INFO     | --- collectZombieJob: --- 10, [16613]
[2026-01-10 20:07:07] 2026-01-11 01:06:35,314 | INFO     | zombie collector waiting for pid 16613
[2026-01-10 20:07:07] 2026-01-11 01:06:35,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:07:07] 2026-01-11 01:06:35,314 | INFO     | collected zombie processes
[2026-01-10 20:07:07] 2026-01-11 01:06:35,314 | INFO     | will attempt to kill all subprocesses of pid=16613
[2026-01-10 20:07:07] 2026-01-11 01:06:35,402 | INFO     | process IDs to be killed: [16613] (in reverse order)
[2026-01-10 20:07:07] 2026-01-11 01:06:35,456 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:07:07] 2026-01-11 01:06:35,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:07:07] 2026-01-11 01:06:35,461 | INFO     | did not find any defunct processes belonging to 16613
[2026-01-10 20:07:07] 2026-01-11 01:06:35,463 | INFO     | did not find any defunct processes belonging to 16613
[2026-01-10 20:07:07] 2026-01-11 01:06:35,463 | INFO     | ready for new job
[2026-01-10 20:07:07] 2026-01-11 01:06:35,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:07:07] 2026-01-11 01:06:35,467 | INFO     | ***************************************
[2026-01-10 20:07:07] 2026-01-11 01:06:35,467 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:07:07] 2026-01-11 01:06:35,467 | INFO     | ***************************************
[2026-01-10 20:07:07] 2026-01-11 01:06:35,467 | INFO     | 
[2026-01-10 20:07:07] 2026-01-11 01:06:35,468 | INFO     | architecture information:
[2026-01-10 20:07:07] 2026-01-11 01:06:35,468 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:07:07] 2026-01-11 01:06:35,489 | INFO     | cat /etc/os-release:
[2026-01-10 20:07:07] NAME="CentOS Linux"
[2026-01-10 20:07:07] VERSION="7 (Core)"
[2026-01-10 20:07:07] ID="centos"
[2026-01-10 20:07:07] ID_LIKE="rhel fedora"
[2026-01-10 20:07:07] VERSION_ID="7"
[2026-01-10 20:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:07:07] ANSI_COLOR="0;31"
[2026-01-10 20:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:07:07] HOME_URL="https://www.centos.org/"
[2026-01-10 20:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:07:07] 
[2026-01-10 20:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:07:07] 
[2026-01-10 20:07:07] 2026-01-11 01:06:35,490 | INFO     | ***************************************
[2026-01-10 20:07:07] 2026-01-11 01:06:35,993 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 20:07:07] 2026-01-11 01:06:36,015 | INFO     | sufficient remaining disk space (17599299584 B)
[2026-01-10 20:07:07] 2026-01-11 01:06:36,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:07:07] 2026-01-11 01:06:36,016 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:07:07] 2026-01-11 01:06:36,016 | INFO     | update_server=False
[2026-01-10 20:07:07] 2026-01-11 01:06:36,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:07:07] 2026-01-11 01:06:36,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:07:07] 2026-01-11 01:06:36,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:07:07] 2026-01-11 01:06:36,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:07:07] 2026-01-11 01:06:36,062 | INFO     | all payload control threads have been joined
[2026-01-10 20:07:07] 2026-01-11 01:06:36,410 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:07:07] 2026-01-11 01:06:36,410 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:07:07] 2026-01-11 01:06:36,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:07:07] 2026-01-11 01:06:36,411 | INFO     | will abort loop
[2026-01-10 20:07:07] 2026-01-11 01:06:36,453 | INFO     | all data control threads have been joined
[2026-01-10 20:07:07] 2026-01-11 01:06:37,022 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,024 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,067 | INFO     | [payload] control thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,085 | INFO     | all job control threads have been joined
[2026-01-10 20:07:07] 2026-01-11 01:06:37,120 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,131 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,219 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,412 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,455 | INFO     | [data] control thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,736 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,743 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:37,784 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:38,023 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:38,090 | INFO     | [job] control thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:38,318 | INFO     | [job] validate thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:40,023 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:07:07] 2026-01-11 01:06:51,571 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:07:07] 2026-01-11 01:06:52,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709063587648)>', '<ExcThread(monitor, started 139707946092288)>']
[2026-01-10 20:07:07] 2026-01-11 01:06:57,612 | INFO     | all workflow threads have been joined
[2026-01-10 20:07:07] 2026-01-11 01:06:57,612 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:07:07] 2026-01-11 01:06:57,613 | INFO     | traces error code: 0
[2026-01-10 20:07:07] 2026-01-11 01:06:57,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:07:07] 2026-01-11 01:07:06,830 | INFO     | PID=10180 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 20:07:07] 2026-01-11 01:07:06,831 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:07:07] 2026-01-11 01:07:06,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:07:07] 2026-01-11 01:07:06,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:07:07] 2026-01-11 01:07:06,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:07:07] 2026-01-11 01:07:06,831 | INFO     | [monitor] control thread has ended
[2026-01-10 20:07:07] 2026-01-11 01:07:06,939 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:07:07] 2026-01-11 01:07:06,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:07:07] 2026-01-11 01:07:06,949 [wrapper] pilotpid: 10180
[2026-01-10 20:07:07] 2026-01-11 01:07:06,954 [wrapper] Pilot exit status: 0
[2026-01-10 20:07:07] 2026-01-11 01:07:06,973 [wrapper] pandaids: 6963381820 6963381820
[2026-01-10 20:07:07] 2026-01-11 01:07:07,016 [wrapper] cleanup supervisor_pilot 13557 10181
[2026-01-10 20:07:07] 2026-01-11 01:07:07,022 [wrapper] Test setup, not cleaning
[2026-01-10 20:07:07] 2026-01-11 01:07:07,027 [wrapper] apfmon messages muted
[2026-01-10 20:07:07] 2026-01-11 01:07:07,032 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:07:07] 2026-01-11 01:07:07,037 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:07:07]  *** Error codes and diagnostics ***
[2026-01-10 20:07:07]     "exeErrorCode": 0,
[2026-01-10 20:07:07]     "exeErrorDiag": "",
[2026-01-10 20:07:07]     "pilotErrorCode": 0,
[2026-01-10 20:07:07]     "pilotErrorDiag": "",
[2026-01-10 20:07:07]  *** Listing of results directory ***
[2026-01-10 20:07:07] total 1549184
[2026-01-10 20:07:07] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 20:07:07] -rwx------ 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:07:07] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:51 run_atlas
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:51 job.xml
[2026-01-10 20:07:07] -rw-r--r-- 3 boincer umatlas 392806840 Jan  9 18:52 EVNT.47962006._000123.pool.root.1
[2026-01-10 20:07:07] -rw-r--r-- 3 boincer umatlas 392806840 Jan  9 18:52 ATLAS.root_0
[2026-01-10 20:07:07] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:52 start_atlas.sh
[2026-01-10 20:07:07] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:52 shared
[2026-01-10 20:07:07] -rw-r--r-- 2 boincer umatlas    592617 Jan  9 18:52 input.tar.gz
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:52 boinc_lockfile
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas      2893 Jan 10 06:48 pandaJob.out
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas        57 Jan 10 06:48 setup.sh.local
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas    989564 Jan 10 06:48 agis_schedconf.cvmfs.json
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas       533 Jan 10 19:55 boinc_task_state.xml
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas      5911 Jan 10 20:00 init_data.xml
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas 779621401 Jan 10 20:05 HITS.47962010._001768.pool.root.1
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas      1060 Jan 10 20:06 memory_monitor_summary.json
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas   1516240 Jan 10 20:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas   2005923 Jan 10 20:06 log.47962010._001768.job.log.tgz.1
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas      8649 Jan 10 20:06 heartbeat.json
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 20:06 boinc_mmap_file
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas        29 Jan 10 20:06 wrapper_checkpoint.txt
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas        96 Jan 10 20:07 pilot_heartbeat.json
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas       745 Jan 10 20:07 pilotlog.txt
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas   6601487 Jan 10 20:07 log.47962010._001768.job.log.1
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas       353 Jan 10 20:07 output.list
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas       620 Jan 10 20:07 runtime_log
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas   8622080 Jan 10 20:07 result.tar.gz
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas       793 Jan 10 20:07 sjANDmTsLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdTmKDmNJL9Vo.diag
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas      9428 Jan 10 20:07 runtime_log.err
[2026-01-10 20:07:07] -rw-r--r-- 1 boincer umatlas     23356 Jan 10 20:07 stderr.txt
[2026-01-10 20:07:07] HITS file was successfully produced:
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas 779621401 Jan 10 20:05 shared/HITS.pool.root.1
[2026-01-10 20:07:07]  *** Contents of shared directory: ***
[2026-01-10 20:07:07] total 1153976
[2026-01-10 20:07:07] -rw-r--r-- 3 boincer umatlas 392806840 Jan  9 18:52 ATLAS.root_0
[2026-01-10 20:07:07] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:52 start_atlas.sh
[2026-01-10 20:07:07] -rw-r--r-- 2 boincer umatlas    592617 Jan  9 18:52 input.tar.gz
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas 779621401 Jan 10 20:05 HITS.pool.root.1
[2026-01-10 20:07:07] -rw------- 1 boincer umatlas   8622080 Jan 10 20:07 result.tar.gz
20:07:08 (6121): run_atlas exited; CPU time 366780.038639
20:07:08 (6121): called boinc_finish(0)

</stderr_txt>
]]>

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