Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:06:52 (2775272): wrapper (7.7.26015): starting
06:06:52 (2775272): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 06:06:52] Arguments: --nthreads 4
[2026-01-10 06:06:52] Threads: 4
[2026-01-10 06:06:52] Checking for CVMFS
[2026-01-10 06:06:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:06:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:06:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:06:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:06:52] 2.13.3.0 3218523 2016 57084 154979 2 97 5280563 6144001 6290 130560 0 8088419 99.949 360945 1039 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-10 06:06:52] CVMFS is ok
[2026-01-10 06:06:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:06:52] Checking for apptainer binary...
[2026-01-10 06:06:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:06:52] Running /usr/bin/apptainer --version
[2026-01-10 06:06:52] apptainer version 1.4.5
[2026-01-10 06:06:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:06:52] Starfish-Cruncher
[2026-01-10 06:06:52] apptainer works
[2026-01-10 06:06:52] Set ATHENA_PROC_NUMBER=4
[2026-01-10 06:06:52] Set ATHENA_CORE_NUMBER=4
[2026-01-10 06:06:52] Starting ATLAS job with PandaID=6963383704
[2026-01-10 06:06:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:03:18]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:03:18] 2026-01-10 14:02:26,421 | INFO     | time since job start (6925s) is within the limit (349056.0s)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,426 | INFO     | time since job start (6927s) is within the limit (349056.0s)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,814 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 08:03:18] 2026-01-10 14:02:28,818 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3651.4429062499994
[2026-01-10 08:03:18] 2026-01-10 14:02:28,822 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963383704/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,823 | INFO     | extracted standard info from prmon json
[2026-01-10 08:03:18] 2026-01-10 14:02:28,823 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:03:18] 2026-01-10 14:02:28,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:03:18] 2026-01-10 14:02:28,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 08:03:18] 2026-01-10 14:02:28,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 08:03:18] 2026-01-10 14:02:28,825 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:03:18] 2026-01-10 14:02:28,825 | INFO     | sum of square deviations: 459366752.5
[2026-01-10 08:03:18] 2026-01-10 14:02:28,826 | INFO     | sum of deviations: 4306638887.500003
[2026-01-10 08:03:18] 2026-01-10 14:02:28,826 | INFO     | mean x: 1768050291.5
[2026-01-10 08:03:18] 2026-01-10 14:02:28,826 | INFO     | mean y: 2285216.043859649
[2026-01-10 08:03:18] 2026-01-10 14:02:28,826 | INFO     | intersect: -16573477176.402287
[2026-01-10 08:03:18] 2026-01-10 14:02:28,826 | INFO     | chi2: 1.945879865664084
[2026-01-10 08:03:18] 2026-01-10 14:02:28,826 | INFO     | sum of square deviations: 401533110.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | sum of deviations: 10397996072.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | mean x: 1768050139.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | mean y: 2300668.972477064
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | intersect: -45782661872.27612
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | chi2: 1.280226919994552
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | current chi2=1.280226919994552 (change=34.20832690729137 %)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,827 | INFO     | sum of square deviations: 348769330.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | sum of deviations: 9856096319.499998
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | mean x: 1768049986.5
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | mean y: 2299101.644230769
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | intersect: -49962160114.52214
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | chi2: 1.2828236305347884
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | current chi2=1.2828236305347884 (change=-0.20283205263700588 %)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | right removable region: 103
[2026-01-10 08:03:18] 2026-01-10 14:02:28,828 | INFO     | sum of square deviations: 401533110.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | sum of deviations: -5622921623.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | mean x: 1768050444.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | mean y: 2310383.3027522936
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | intersect: 24761436902.46415
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | chi2: 0.7170990593900183
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | current chi2=0.7170990593900183 (change=63.147824691361976 %)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,829 | INFO     | sum of square deviations: 348769330.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | sum of deviations: -4694871954.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | mean x: 1768050596.5
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | mean y: 2307822.5384615385
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | intersect: 23802483023.61139
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | chi2: 0.6978697617377156
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | current chi2=0.6978697617377156 (change=2.6815399351743032 %)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | left removable region: 20
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | sum of square deviations: 177275882.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | sum of deviations: 697533719.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,830 | INFO     | mean x: 1768050566.0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | mean y: 2327257.43373494
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | intersect: -6954484198.069473
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | chi2: 6.96312043326581e-05
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | current memory leak: 3.93 B/s (using 83 data points, chi2=0.00)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | could have reported an average CPU frequency of 3596 MHz (7 samples)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | ..............................
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | . Timing measurements:
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | . get job = 0 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | . initial setup = 2 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | . payload setup = 4 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,831 | INFO     | . stage-in = 0 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,832 | INFO     | . payload execution = 6900 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,832 | INFO     | . stage-out = 0 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,832 | INFO     | . log creation = 0 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,832 | INFO     | ..............................
[2026-01-10 08:03:18] 2026-01-10 14:02:28,902 | INFO     | 
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | job summary report
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | --------------------------------------------------
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | PanDA job id: 6963383704
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | task id: 47929288
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | errors: (none)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | pilot state: finished 
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | transexitcode: 0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | exeerrorcode: 0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | exeerrordiag: 
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | exitcode: 0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | exitmsg: OK
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | cpuconsumptiontime: 26724 s
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | nevents: 400
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | neventsw: 0
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | pid: 2785992
[2026-01-10 08:03:18] 2026-01-10 14:02:28,903 | INFO     | pgrp: 2785992
[2026-01-10 08:03:18] 2026-01-10 14:02:28,904 | INFO     | corecount: 4
[2026-01-10 08:03:18] 2026-01-10 14:02:28,904 | INFO     | event service: False
[2026-01-10 08:03:18] 2026-01-10 14:02:28,904 | INFO     | sizes: {0: 2283970, 3: 2284232, 11: 2284260, 6908: 2311562, 6909: 2320630, 6913: 2320768}
[2026-01-10 08:03:18] 2026-01-10 14:02:28,904 | INFO     | --------------------------------------------------
[2026-01-10 08:03:18] 2026-01-10 14:02:28,904 | INFO     | 
[2026-01-10 08:03:18] 2026-01-10 14:02:28,904 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-10 08:03:18] 2026-01-10 14:02:28,919 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | job 6963383704 has completed (purged errors)
[2026-01-10 08:03:18] 2026-01-10 14:02:28,921 | INFO     | overall cleanup function is called
[2026-01-10 08:03:18] 2026-01-10 14:02:29,929 | INFO     | --- collectZombieJob: --- 10, [2785992]
[2026-01-10 08:03:18] 2026-01-10 14:02:29,929 | INFO     | zombie collector waiting for pid 2785992
[2026-01-10 08:03:18] 2026-01-10 14:02:29,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:03:18] 2026-01-10 14:02:29,929 | INFO     | collected zombie processes
[2026-01-10 08:03:18] 2026-01-10 14:02:29,929 | INFO     | will attempt to kill all subprocesses of pid=2785992
[2026-01-10 08:03:18] 2026-01-10 14:02:30,092 | INFO     | process IDs to be killed: [2785992] (in reverse order)
[2026-01-10 08:03:18] 2026-01-10 14:02:30,153 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:03:18] 2026-01-10 14:02:30,153 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:03:18] 2026-01-10 14:02:30,158 | INFO     | did not find any defunct processes belonging to 2785992
[2026-01-10 08:03:18] 2026-01-10 14:02:30,162 | INFO     | did not find any defunct processes belonging to 2785992
[2026-01-10 08:03:18] 2026-01-10 14:02:30,162 | INFO     | ready for new job
[2026-01-10 08:03:18] 2026-01-10 14:02:30,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:03:18] 2026-01-10 14:02:30,164 | INFO     | ***************************************
[2026-01-10 08:03:18] 2026-01-10 14:02:30,164 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:03:18] 2026-01-10 14:02:30,164 | INFO     | ***************************************
[2026-01-10 08:03:18] 2026-01-10 14:02:30,164 | INFO     | 
[2026-01-10 08:03:18] 2026-01-10 14:02:30,165 | INFO     | architecture information:
[2026-01-10 08:03:18] 2026-01-10 14:02:30,165 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:03:18] 2026-01-10 14:02:30,178 | INFO     | cat /etc/os-release:
[2026-01-10 08:03:18] NAME="CentOS Linux"
[2026-01-10 08:03:18] VERSION="7 (Core)"
[2026-01-10 08:03:18] ID="centos"
[2026-01-10 08:03:18] ID_LIKE="rhel fedora"
[2026-01-10 08:03:18] VERSION_ID="7"
[2026-01-10 08:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:03:18] ANSI_COLOR="0;31"
[2026-01-10 08:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:03:18] HOME_URL="https://www.centos.org/"
[2026-01-10 08:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:03:18] 
[2026-01-10 08:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:03:18] 
[2026-01-10 08:03:18] 2026-01-10 14:02:30,178 | INFO     | ***************************************
[2026-01-10 08:03:18] 2026-01-10 14:02:30,681 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | INFO     | sufficient remaining disk space (1815822204928 B)
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | INFO     | update_server=False
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:03:18] 2026-01-10 14:02:30,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:03:18] 2026-01-10 14:02:30,695 | INFO     | aborting loop
[2026-01-10 08:03:18] 2026-01-10 14:02:31,189 | INFO     | all job control threads have been joined
[2026-01-10 08:03:18] 2026-01-10 14:02:31,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:03:18] 2026-01-10 14:02:31,489 | INFO     | all data control threads have been joined
[2026-01-10 08:03:18] 2026-01-10 14:02:31,699 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:31,700 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:31,700 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:31,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:03:18] 2026-01-10 14:02:32,194 | INFO     | all payload control threads have been joined
[2026-01-10 08:03:18] 2026-01-10 14:02:32,194 | INFO     | [job] control thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:32,378 | INFO     | [job] validate thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:32,416 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:32,494 | INFO     | [data] control thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:32,555 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:32,691 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:32,876 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:33,064 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:33,193 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:33,198 | INFO     | [payload] control thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:33,262 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:33,266 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:02:35,830 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:03:18] 2026-01-10 14:03:01,674 | INFO     | PID=2779174 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 08:03:18] 2026-01-10 14:03:01,675 | INFO     | .. there are 7 such processes running
[2026-01-10 08:03:18] 2026-01-10 14:03:01,675 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:03:18] 2026-01-10 14:03:01,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:03:18] 2026-01-10 14:03:01,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:03:18] 2026-01-10 14:03:12,668 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:03:18] 2026-01-10 14:03:13,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127213024118592)>', '<ExcThread(monitor, started 127212661483264)>']
[2026-01-10 08:03:18] 2026-01-10 14:03:13,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:03:18] 2026-01-10 14:03:13,730 | INFO     | [monitor] control thread has ended
[2026-01-10 08:03:18] 2026-01-10 14:03:18,743 | INFO     | all workflow threads have been joined
[2026-01-10 08:03:18] 2026-01-10 14:03:18,743 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:03:18] 2026-01-10 14:03:18,743 | INFO     | traces error code: 0
[2026-01-10 08:03:18] 2026-01-10 14:03:18,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:03:18] 2026-01-10 14:03:18,817 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:03:18] 2026-01-10 14:03:18,819 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:03:18] 2026-01-10 14:03:18,821 [wrapper] pilotpid: 2779174
[2026-01-10 08:03:18] 2026-01-10 14:03:18,823 [wrapper] Pilot exit status: 0
[2026-01-10 08:03:18] 2026-01-10 14:03:18,831 [wrapper] pandaids: 6963383704
[2026-01-10 08:03:18] 2026-01-10 14:03:18,869 [wrapper] cleanup supervisor_pilot 2910674 2779175
[2026-01-10 08:03:18] 2026-01-10 14:03:18,872 [wrapper] Test setup, not cleaning
[2026-01-10 08:03:18] 2026-01-10 14:03:18,874 [wrapper] apfmon messages muted
[2026-01-10 08:03:18] 2026-01-10 14:03:18,876 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:03:18] 2026-01-10 14:03:18,878 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:03:18]  *** Error codes and diagnostics ***
[2026-01-10 08:03:18]     "exeErrorCode": 0,
[2026-01-10 08:03:18]     "exeErrorDiag": "",
[2026-01-10 08:03:18]     "pilotErrorCode": 0,
[2026-01-10 08:03:18]     "pilotErrorDiag": "",
[2026-01-10 08:03:18]  *** Listing of results directory ***
[2026-01-10 08:03:18] total 430696
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:13 pilot3.tar.gz
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc      5112 Jan  9 01:13 queuedata.json
[2026-01-10 08:03:18] -rwx------ 1 boinc boinc     36322 Jan  9 01:14 runpilot2-wrapper.sh
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc       100 Jan 10 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:03:18] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 06:06 run_atlas
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc       105 Jan 10 06:06 job.xml
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc      9662 Jan 10 06:06 init_data.xml
[2026-01-10 08:03:18] -rw-r--r-- 2 boinc boinc 249645481 Jan 10 06:06 EVNT.47929286._000016.pool.root.1
[2026-01-10 08:03:18] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:06 start_atlas.sh
[2026-01-10 08:03:18] drwxrwx--x 2 boinc boinc      4096 Jan 10 06:06 shared
[2026-01-10 08:03:18] -rw-r--r-- 2 boinc boinc    592401 Jan 10 06:06 input.tar.gz
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc         0 Jan 10 06:06 boinc_lockfile
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc      2548 Jan 10 06:06 pandaJob.out
[2026-01-10 08:03:18] -rw------- 1 boinc boinc    989564 Jan 10 06:06 agis_schedconf.cvmfs.json
[2026-01-10 08:03:18] -rw------- 1 boinc boinc   1516240 Jan 10 06:07 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:03:18] drwx------ 5 boinc boinc      4096 Jan 10 06:07 pilot3
[2026-01-10 08:03:18] -rw------- 1 boinc boinc 184843762 Jan 10 08:02 HITS.47929288._002249.pool.root.1
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc       529 Jan 10 08:02 boinc_task_state.xml
[2026-01-10 08:03:18] -rw------- 1 boinc boinc      1018 Jan 10 08:02 memory_monitor_summary.json
[2026-01-10 08:03:18] -rw------- 1 boinc boinc    301474 Jan 10 08:02 log.47929288._002249.job.log.tgz.1
[2026-01-10 08:03:18] -rw------- 1 boinc boinc      7755 Jan 10 08:02 heartbeat.json
[2026-01-10 08:03:18] -rw------- 1 boinc boinc        95 Jan 10 08:03 pilot_heartbeat.json
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc      8192 Jan 10 08:03 boinc_mmap_file
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc        27 Jan 10 08:03 wrapper_checkpoint.txt
[2026-01-10 08:03:18] -rw------- 1 boinc boinc      4832 Jan 10 08:03 pilotlog.txt
[2026-01-10 08:03:18] -rw------- 1 boinc boinc   1014090 Jan 10 08:03 log.47929288._002249.job.log.1
[2026-01-10 08:03:18] -rw------- 1 boinc boinc       357 Jan 10 08:03 output.list
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc       620 Jan 10 08:03 runtime_log
[2026-01-10 08:03:18] -rw------- 1 boinc boinc   1331200 Jan 10 08:03 result.tar.gz
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc      8933 Jan 10 08:03 runtime_log.err
[2026-01-10 08:03:18] -rw------- 1 boinc boinc       652 Jan 10 08:03 1YiNDmTsLy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvTmKDmeZvtMn.diag
[2026-01-10 08:03:18] -rw-r--r-- 1 boinc boinc     20765 Jan 10 08:03 stderr.txt
[2026-01-10 08:03:18] HITS file was successfully produced:
[2026-01-10 08:03:18] -rw------- 1 boinc boinc 184843762 Jan 10 08:02 shared/HITS.pool.root.1
[2026-01-10 08:03:18]  *** Contents of shared directory: ***
[2026-01-10 08:03:18] total 426212
[2026-01-10 08:03:18] -rw-r--r-- 2 boinc boinc 249645481 Jan 10 06:06 ATLAS.root_0
[2026-01-10 08:03:18] -rw-r--r-- 2 boinc boinc     15847 Jan 10 06:06 start_atlas.sh
[2026-01-10 08:03:18] -rw-r--r-- 2 boinc boinc    592401 Jan 10 06:06 input.tar.gz
[2026-01-10 08:03:18] -rw------- 1 boinc boinc 184843762 Jan 10 08:02 HITS.pool.root.1
[2026-01-10 08:03:18] -rw------- 1 boinc boinc   1331200 Jan 10 08:03 result.tar.gz
08:03:20 (2775272): run_atlas exited; CPU time 26826.992127
08:03:20 (2775272): called boinc_finish(0)

</stderr_txt>
]]>

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