Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:19:26 (2672845): wrapper (7.7.26015): starting
04:19:26 (2672845): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 04:19:26] Arguments: --nthreads 4
[2026-01-11 04:19:26] Threads: 4
[2026-01-11 04:19:26] Checking for CVMFS
[2026-01-11 04:19:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 04:19:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 04:19:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 04:19:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 04:19:26] 2.13.3.0 4011391 2894 57916 154987 0 81 4944360 6144000 2591 130560 0 7286767 99.997 95220 101 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-11 04:19:26] CVMFS is ok
[2026-01-11 04:19:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:19:26] Checking for apptainer binary...
[2026-01-11 04:19:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 04:19:26] Running /usr/bin/apptainer --version
[2026-01-11 04:19:26] apptainer version 1.4.0
[2026-01-11 04:19:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:19:27] Zen
[2026-01-11 04:19:27] apptainer works
[2026-01-11 04:19:27] Set ATHENA_PROC_NUMBER=4
[2026-01-11 04:19:27] Set ATHENA_CORE_NUMBER=4
[2026-01-11 04:19:27] Starting ATLAS job with PandaID=6963381823
[2026-01-11 04:19:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 13:06:32]  *** The last 200 lines of the pilot log: ***
[2026-01-11 13:06:32] 2026-01-11 02:05:24,932 | INFO     | time since job start (31546s) is within the limit (349056.0s)
[2026-01-11 13:06:32] 2026-01-11 02:05:26,585 | INFO     | monitor loop #2358: job 0:6963381823 is in state 'finished'
[2026-01-11 13:06:32] 2026-01-11 02:05:26,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 13:06:32] 2026-01-11 02:05:26,937 | INFO     | time since job start (31548s) is within the limit (349056.0s)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,055 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 13:06:32] 2026-01-11 02:05:28,059 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4036.0628333333334
[2026-01-11 13:06:32] 2026-01-11 02:05:28,062 | INFO     | using path: /home/michael/Boinc/BOINC/slots/3/PanDA_Pilot-6963381823/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,063 | INFO     | extracted standard info from prmon json
[2026-01-11 13:06:32] 2026-01-11 02:05:28,063 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 13:06:32] 2026-01-11 02:05:28,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 13:06:32] 2026-01-11 02:05:28,069 | INFO     | fitting pss+swap vs Time
[2026-01-11 13:06:32] 2026-01-11 02:05:28,070 | INFO     | sum of square deviations: 42849763418.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,075 | INFO     | sum of deviations: 155650301994.99994
[2026-01-11 13:06:32] 2026-01-11 02:05:28,075 | INFO     | mean x: 1768081337.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,075 | INFO     | mean y: 2242515.752417795
[2026-01-11 13:06:32] 2026-01-11 02:05:28,075 | INFO     | intersect: -6420252548.483301
[2026-01-11 13:06:32] 2026-01-11 02:05:28,075 | INFO     | chi2: 6.122959371075326
[2026-01-11 13:06:32] 2026-01-11 02:05:28,076 | INFO     | sum of square deviations: 41618521728.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,080 | INFO     | sum of deviations: 274019405583.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,080 | INFO     | mean x: 1768081184.5
[2026-01-11 13:06:32] 2026-01-11 02:05:28,080 | INFO     | mean y: 2257182.84375
[2026-01-11 13:06:32] 2026-01-11 02:05:28,080 | INFO     | intersect: -11638919271.36999
[2026-01-11 13:06:32] 2026-01-11 02:05:28,081 | INFO     | chi2: 3.7956408606349687
[2026-01-11 13:06:32] 2026-01-11 02:05:28,081 | INFO     | current chi2=3.7956408606349687 (change=38.00970036539094 %)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,081 | INFO     | sum of square deviations: 40411094438.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,085 | INFO     | sum of deviations: 303514398741.0001
[2026-01-11 13:06:32] 2026-01-11 02:05:28,086 | INFO     | mean x: 1768081032.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,086 | INFO     | mean y: 2260899.402366864
[2026-01-11 13:06:32] 2026-01-11 02:05:28,086 | INFO     | intersect: -13277212443.646393
[2026-01-11 13:06:32] 2026-01-11 02:05:28,086 | INFO     | chi2: 3.5606293154163873
[2026-01-11 13:06:32] 2026-01-11 02:05:28,086 | INFO     | current chi2=3.5606293154163873 (change=6.191617011396243 %)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,086 | INFO     | right removable region: 506
[2026-01-11 13:06:32] 2026-01-11 02:05:28,087 | INFO     | sum of square deviations: 41618521728.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,091 | INFO     | sum of deviations: 34192550911.5
[2026-01-11 13:06:32] 2026-01-11 02:05:28,091 | INFO     | mean x: 1768081489.5
[2026-01-11 13:06:32] 2026-01-11 02:05:28,091 | INFO     | mean y: 2257544.451171875
[2026-01-11 13:06:32] 2026-01-11 02:05:28,091 | INFO     | intersect: -1450346100.1596985
[2026-01-11 13:06:32] 2026-01-11 02:05:28,092 | INFO     | chi2: 3.6185777472290015
[2026-01-11 13:06:32] 2026-01-11 02:05:28,092 | INFO     | current chi2=3.6185777472290015 (change=40.90149014669193 %)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,092 | INFO     | sum of square deviations: 40411094438.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,096 | INFO     | sum of deviations: -34158009509.000015
[2026-01-11 13:06:32] 2026-01-11 02:05:28,096 | INFO     | mean x: 1768081642.0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,096 | INFO     | mean y: 2266156.187376726
[2026-01-11 13:06:32] 2026-01-11 02:05:28,096 | INFO     | intersect: 1496760437.5234838
[2026-01-11 13:06:32] 2026-01-11 02:05:28,097 | INFO     | chi2: 2.7161576948856836
[2026-01-11 13:06:32] 2026-01-11 02:05:28,097 | INFO     | current chi2=2.7161576948856836 (change=24.938528764080424 %)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,097 | INFO     | left removable region: 20
[2026-01-11 13:06:32] 2026-01-11 02:05:28,097 | INFO     | sum of square deviations: 35594704597.5
[2026-01-11 13:06:32] 2026-01-11 02:05:28,101 | INFO     | sum of deviations: 108231359166.49998
[2026-01-11 13:06:32] 2026-01-11 02:05:28,101 | INFO     | mean x: 1768081611.5
[2026-01-11 13:06:32] 2026-01-11 02:05:28,101 | INFO     | mean y: 2286014.5658436213
[2026-01-11 13:06:32] 2026-01-11 02:05:28,101 | INFO     | intersect: -5373847264.0730505
[2026-01-11 13:06:32] 2026-01-11 02:05:28,102 | INFO     | chi2: 0.11607054904975596
[2026-01-11 13:06:32] 2026-01-11 02:05:28,102 | INFO     | current memory leak: 3.04 B/s (using 486 data points, chi2=0.12)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,102 | INFO     | could have reported an average CPU frequency of 4253 MHz (21 samples)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,102 | INFO     | ..............................
[2026-01-11 13:06:32] 2026-01-11 02:05:28,102 | INFO     | . Timing measurements:
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . get job = 0 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . initial setup = 5 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . payload setup = 4 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . stage-in = 0 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . payload execution = 31515 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . stage-out = 6 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | . log creation = 0 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,103 | INFO     | ..............................
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | 
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | job summary report
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | --------------------------------------------------
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | PanDA job id: 6963381823
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | task id: 47962010
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | errors: (none)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | pilot state: finished 
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | transexitcode: 0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | exeerrorcode: 0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,173 | INFO     | exeerrordiag: 
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | exitcode: 0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | exitmsg: OK
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | cpuconsumptiontime: 122799 s
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | nevents: 900
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | neventsw: 0
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | pid: 2683258
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | pgrp: 2683258
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | corecount: 4
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | event service: False
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | sizes: {0: 2284635, 3: 2284897, 11: 2284925, 31523: 2324605, 31529: 2333677, 31536: 2333867}
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | --------------------------------------------------
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | 
[2026-01-11 13:06:32] 2026-01-11 02:05:28,174 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/3
[2026-01-11 13:06:32] 2026-01-11 02:05:28,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,196 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,196 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 13:06:32] 2026-01-11 02:05:28,196 | INFO     | job 6963381823 has completed (purged errors)
[2026-01-11 13:06:32] 2026-01-11 02:05:28,196 | INFO     | overall cleanup function is called
[2026-01-11 13:06:32] 2026-01-11 02:05:29,208 | INFO     | --- collectZombieJob: --- 10, [2683258]
[2026-01-11 13:06:32] 2026-01-11 02:05:29,208 | INFO     | zombie collector waiting for pid 2683258
[2026-01-11 13:06:32] 2026-01-11 02:05:29,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 13:06:32] 2026-01-11 02:05:29,209 | INFO     | collected zombie processes
[2026-01-11 13:06:32] 2026-01-11 02:05:29,209 | INFO     | will attempt to kill all subprocesses of pid=2683258
[2026-01-11 13:06:32] 2026-01-11 02:05:29,361 | INFO     | process IDs to be killed: [2683258] (in reverse order)
[2026-01-11 13:06:32] 2026-01-11 02:05:29,423 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 13:06:32] 2026-01-11 02:05:29,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 13:06:32] 2026-01-11 02:05:29,427 | INFO     | did not find any defunct processes belonging to 2683258
[2026-01-11 13:06:32] 2026-01-11 02:05:29,431 | INFO     | did not find any defunct processes belonging to 2683258
[2026-01-11 13:06:32] 2026-01-11 02:05:29,431 | INFO     | ready for new job
[2026-01-11 13:06:32] 2026-01-11 02:05:29,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 13:06:32] 2026-01-11 02:05:29,434 | INFO     | ***************************************
[2026-01-11 13:06:32] 2026-01-11 02:05:29,434 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 13:06:32] 2026-01-11 02:05:29,434 | INFO     | ***************************************
[2026-01-11 13:06:32] 2026-01-11 02:05:29,434 | INFO     | 
[2026-01-11 13:06:32] 2026-01-11 02:05:29,436 | INFO     | architecture information:
[2026-01-11 13:06:32] 2026-01-11 02:05:29,436 | INFO     | executing command: cat /etc/os-release
[2026-01-11 13:06:32] 2026-01-11 02:05:29,452 | INFO     | cat /etc/os-release:
[2026-01-11 13:06:32] NAME="CentOS Linux"
[2026-01-11 13:06:32] VERSION="7 (Core)"
[2026-01-11 13:06:32] ID="centos"
[2026-01-11 13:06:32] ID_LIKE="rhel fedora"
[2026-01-11 13:06:32] VERSION_ID="7"
[2026-01-11 13:06:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 13:06:32] ANSI_COLOR="0;31"
[2026-01-11 13:06:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 13:06:32] HOME_URL="https://www.centos.org/"
[2026-01-11 13:06:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 13:06:32] 
[2026-01-11 13:06:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 13:06:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 13:06:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 13:06:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 13:06:32] 
[2026-01-11 13:06:32] 2026-01-11 02:05:29,452 | INFO     | ***************************************
[2026-01-11 13:06:32] 2026-01-11 02:05:29,955 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/3
[2026-01-11 13:06:32] 2026-01-11 02:05:29,971 | INFO     | sufficient remaining disk space (202654089216 B)
[2026-01-11 13:06:32] 2026-01-11 02:05:29,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 13:06:32] 2026-01-11 02:05:29,972 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 13:06:32] 2026-01-11 02:05:29,972 | INFO     | update_server=False
[2026-01-11 13:06:32] 2026-01-11 02:05:29,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 13:06:32] 2026-01-11 02:05:29,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:06:32] 2026-01-11 02:05:30,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 13:06:32] 2026-01-11 02:05:30,093 | INFO     | aborting loop
[2026-01-11 13:06:32] 2026-01-11 02:05:30,777 | INFO     | all payload control threads have been joined
[2026-01-11 13:06:32] 2026-01-11 02:05:30,977 | INFO     | [job] retrieve thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:30,977 | INFO     | [job] queue monitor thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:30,996 | INFO     | all data control threads have been joined
[2026-01-11 13:06:32] 2026-01-11 02:05:31,098 | INFO     | [job] job monitor thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:31,179 | INFO     | [data] copytool_in thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:31,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 13:06:32] 2026-01-11 02:05:31,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 13:06:32] 2026-01-11 02:05:31,428 | INFO     | all job control threads have been joined
[2026-01-11 13:06:32] 2026-01-11 02:05:31,672 | INFO     | [payload] validate_post thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:31,781 | INFO     | [payload] control thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,002 | INFO     | [data] control thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,105 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,183 | INFO     | [job] validate thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,188 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,199 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,316 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,421 | INFO     | [payload] failed_post thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:32,433 | INFO     | [job] control thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:33,336 | INFO     | [data] copytool_out thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:05:35,393 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 13:06:32] 2026-01-11 02:06:00,151 | INFO     | PID=2676661 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 13:06:32] 2026-01-11 02:06:00,151 | INFO     | .. there are 4 such processes running
[2026-01-11 13:06:32] 2026-01-11 02:06:00,151 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 13:06:32] 2026-01-11 02:06:00,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 13:06:32] 2026-01-11 02:06:00,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 13:06:32] 2026-01-11 02:06:26,057 | INFO     | [monitor] cgroup control has ended
[2026-01-11 13:06:32] 2026-01-11 02:06:27,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138203928639296)>', '<ExcThread(monitor, started 138203424077568)>']
[2026-01-11 13:06:32] 2026-01-11 02:06:27,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 13:06:32] 2026-01-11 02:06:27,276 | INFO     | [monitor] control thread has ended
[2026-01-11 13:06:32] 2026-01-11 02:06:32,079 | INFO     | all workflow threads have been joined
[2026-01-11 13:06:32] 2026-01-11 02:06:32,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 13:06:32] 2026-01-11 02:06:32,080 | INFO     | traces error code: 0
[2026-01-11 13:06:32] 2026-01-11 02:06:32,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 13:06:32] 2026-01-11 02:06:32,169 [wrapper] ==== pilot stdout END ====
[2026-01-11 13:06:32] 2026-01-11 02:06:32,173 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 13:06:32] 2026-01-11 02:06:32,175 [wrapper] pilotpid: 2676661
[2026-01-11 13:06:32] 2026-01-11 02:06:32,178 [wrapper] Pilot exit status: 0
[2026-01-11 13:06:32] 2026-01-11 02:06:32,187 [wrapper] pandaids: 6963381823
[2026-01-11 13:06:32] 2026-01-11 02:06:32,228 [wrapper] cleanup supervisor_pilot 3038997 2676662
[2026-01-11 13:06:32] 2026-01-11 02:06:32,230 [wrapper] Test setup, not cleaning
[2026-01-11 13:06:32] 2026-01-11 02:06:32,233 [wrapper] apfmon messages muted
[2026-01-11 13:06:32] 2026-01-11 02:06:32,235 [wrapper] ==== wrapper stdout END ====
[2026-01-11 13:06:32] 2026-01-11 02:06:32,237 [wrapper] ==== wrapper stderr END ====
[2026-01-11 13:06:32]  *** Error codes and diagnostics ***
[2026-01-11 13:06:32]     "exeErrorCode": 0,
[2026-01-11 13:06:32]     "exeErrorDiag": "",
[2026-01-11 13:06:32]     "pilotErrorCode": 0,
[2026-01-11 13:06:32]     "pilotErrorDiag": "",
[2026-01-11 13:06:32]  *** Listing of results directory ***
[2026-01-11 13:06:32] total 1165092
[2026-01-11 13:06:32] -rwx------ 1 michael michael     36322 Jan  9 18:17 runpilot2-wrapper.sh
[2026-01-11 13:06:32] -rw-r--r-- 1 michael michael    579449 Jan  9 18:20 pilot3.tar.gz
[2026-01-11 13:06:32] -rw-r--r-- 1 michael michael      5112 Jan  9 18:21 queuedata.json
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael       100 Jan 11 04:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 13:06:32] -rwxr-xr-x 1 michael michael      7986 Jan 11 04:19 run_atlas
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael       105 Jan 11 04:19 job.xml
[2026-01-11 13:06:32] -rw-r--r-- 2 michael michael 392806840 Jan 11 04:19 EVNT.47962006._000123.pool.root.1
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael      9822 Jan 11 04:19 init_data.xml
[2026-01-11 13:06:32] drwxrwx--x 2 michael michael      4096 Jan 11 04:19 shared
[2026-01-11 13:06:32] -rw-r--r-- 2 michael michael    592617 Jan 11 04:19 input.tar.gz
[2026-01-11 13:06:32] -rw-r--r-- 2 michael michael     15847 Jan 11 04:19 start_atlas.sh
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael         0 Jan 11 04:19 boinc_lockfile
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael      2893 Jan 11 04:19 pandaJob.out
[2026-01-11 13:06:32] -rw------- 1 michael michael        50 Jan 11 04:19 setup.sh.local
[2026-01-11 13:06:32] -rw------- 1 michael michael    989548 Jan 11 04:19 agis_schedconf.cvmfs.json
[2026-01-11 13:06:32] drwx------ 5 michael michael      4096 Jan 11 04:19 pilot3
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael       532 Jan 11 12:55 boinc_task_state.xml
[2026-01-11 13:06:32] -rw------- 1 michael michael 784566205 Jan 11 13:04 HITS.47962010._001771.pool.root.1
[2026-01-11 13:06:32] -rw------- 1 michael michael      1028 Jan 11 13:05 memory_monitor_summary.json
[2026-01-11 13:06:32] -rw------- 1 michael michael   1516240 Jan 11 13:05 agis_ddmendpoints.agis.ALL.json
[2026-01-11 13:06:32] -rw------- 1 michael michael   1328855 Jan 11 13:05 log.47962010._001771.job.log.tgz.1
[2026-01-11 13:06:32] -rw------- 1 michael michael      8533 Jan 11 13:05 heartbeat.json
[2026-01-11 13:06:32] -rw------- 1 michael michael        95 Jan 11 13:06 pilot_heartbeat.json
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael      8192 Jan 11 13:06 boinc_mmap_file
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael        29 Jan 11 13:06 wrapper_checkpoint.txt
[2026-01-11 13:06:32] -rw------- 1 michael michael      4835 Jan 11 13:06 pilotlog.txt
[2026-01-11 13:06:32] -rw------- 1 michael michael   4544561 Jan 11 13:06 log.47962010._001771.job.log.1
[2026-01-11 13:06:32] -rw------- 1 michael michael       353 Jan 11 13:06 output.list
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael       620 Jan 11 13:06 runtime_log
[2026-01-11 13:06:32] -rw------- 1 michael michael   5898240 Jan 11 13:06 result.tar.gz
[2026-01-11 13:06:32] -rw------- 1 michael michael       648 Jan 11 13:06 S3GKDmcvLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXRhKDmFUwtkn.diag
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael      9446 Jan 11 13:06 runtime_log.err
[2026-01-11 13:06:32] -rw-rw-r-- 1 michael michael     20859 Jan 11 13:06 stderr.txt
[2026-01-11 13:06:32] HITS file was successfully produced:
[2026-01-11 13:06:32] -rw------- 1 michael michael 784566205 Jan 11 13:04 shared/HITS.pool.root.1
[2026-01-11 13:06:32]  *** Contents of shared directory: ***
[2026-01-11 13:06:32] total 1156148
[2026-01-11 13:06:32] -rw-r--r-- 2 michael michael 392806840 Jan 11 04:19 ATLAS.root_0
[2026-01-11 13:06:32] -rw-r--r-- 2 michael michael    592617 Jan 11 04:19 input.tar.gz
[2026-01-11 13:06:32] -rw-r--r-- 2 michael michael     15847 Jan 11 04:19 start_atlas.sh
[2026-01-11 13:06:32] -rw------- 1 michael michael 784566205 Jan 11 13:04 HITS.pool.root.1
[2026-01-11 13:06:32] -rw------- 1 michael michael   5898240 Jan 11 13:06 result.tar.gz
13:06:34 (2672845): run_atlas exited; CPU time 122945.027048
13:06:34 (2672845): called boinc_finish(0)

</stderr_txt>
]]>

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