Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:59:59 (12739): wrapper (7.7.26015): starting
06:59:59 (12739): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 06:59:59] Arguments: --nthreads 8
[2026-01-10 06:59:59] Threads: 8
[2026-01-10 06:59:59] Checking for CVMFS
[2026-01-10 07:00:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:00:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:00:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:00:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:00:03] 2.11.2.0 9903 27079 100788 154969 0 61 14540503 25165824 96 130560 0 3206338 99.515 3410272 2517 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 07:00:03] CVMFS is ok
[2026-01-10 07:00:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:00:03] Checking for apptainer binary...
[2026-01-10 07:00:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:00:03] Running /usr/bin/apptainer --version
[2026-01-10 07:00:03] apptainer version 1.3.2-1.el7
[2026-01-10 07:00:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:00:16] cg-vwn423.simple-grid.lan
[2026-01-10 07:00:16] apptainer works
[2026-01-10 07:00:16] Set ATHENA_PROC_NUMBER=8
[2026-01-10 07:00:16] Set ATHENA_CORE_NUMBER=8
[2026-01-10 07:00:16] Starting ATLAS job with PandaID=6964539323
[2026-01-10 07:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:20:17]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:20:17] 2026-01-10 08:19:32,310 | INFO     | time since job start (8078s) is within the limit (349056.0s)
[2026-01-10 09:20:17] 2026-01-10 08:19:32,776 | INFO     | monitor loop #655: job 0:6964539323 is in state 'finished'
[2026-01-10 09:20:17] 2026-01-10 08:19:32,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:20:17] 2026-01-10 08:19:34,322 | INFO     | time since job start (8080s) is within the limit (349056.0s)
[2026-01-10 09:20:17] 2026-01-10 08:19:35,290 | INFO     | monitor loop #656: job 0:6964539323 is in state 'finished'
[2026-01-10 09:20:17] 2026-01-10 08:19:35,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:20:17] 2026-01-10 08:19:36,338 | INFO     | time since job start (8082s) is within the limit (349056.0s)
[2026-01-10 09:20:17] 2026-01-10 08:19:37,498 | INFO     | PID=16501 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:20:17] 2026-01-10 08:19:37,498 | INFO     | .. there are 2 such processes running
[2026-01-10 09:20:17] 2026-01-10 08:19:37,808 | INFO     | monitor loop #657: job 0:6964539323 is in state 'finished'
[2026-01-10 09:20:17] 2026-01-10 08:19:37,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:20:17] 2026-01-10 08:19:38,501 | INFO     | time since job start (8084s) is within the limit (349056.0s)
[2026-01-10 09:20:17] 2026-01-10 08:19:40,313 | INFO     | monitor loop #658: job 0:6964539323 is in state 'finished'
[2026-01-10 09:20:17] 2026-01-10 08:19:40,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:20:17] 2026-01-10 08:19:40,508 | INFO     | time since job start (8086s) is within the limit (349056.0s)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,403 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:20:17] 2026-01-10 08:19:41,404 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 09:20:17] 2026-01-10 08:19:41,406 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6964539323/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,407 | INFO     | extracted standard info from prmon json
[2026-01-10 09:20:17] 2026-01-10 08:19:41,407 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:20:17] 2026-01-10 08:19:41,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:20:17] 2026-01-10 08:19:41,410 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:20:17] 2026-01-10 08:19:41,411 | INFO     | sum of square deviations: 563032582.622952
[2026-01-10 09:20:17] 2026-01-10 08:19:41,412 | INFO     | sum of deviations: 37673523438.4099
[2026-01-10 09:20:17] 2026-01-10 08:19:41,412 | INFO     | mean x: 1768029354.2459016
[2026-01-10 09:20:17] 2026-01-10 08:19:41,412 | INFO     | mean y: 1909871.3196721312
[2026-01-10 09:20:17] 2026-01-10 08:19:41,412 | INFO     | intersect: -118300116286.17047
[2026-01-10 09:20:17] 2026-01-10 08:19:41,412 | INFO     | chi2: 32.39401046304181
[2026-01-10 09:20:17] 2026-01-10 08:19:41,413 | INFO     | sum of square deviations: 496631182.22222257
[2026-01-10 09:20:17] 2026-01-10 08:19:41,413 | INFO     | sum of deviations: 65674515571.77777
[2026-01-10 09:20:17] 2026-01-10 08:19:41,414 | INFO     | mean x: 1768029201.7777777
[2026-01-10 09:20:17] 2026-01-10 08:19:41,414 | INFO     | mean y: 1974142.9145299145
[2026-01-10 09:20:17] 2026-01-10 08:19:41,414 | INFO     | intersect: -233802236104.10922
[2026-01-10 09:20:17] 2026-01-10 08:19:41,414 | INFO     | chi2: 27.187825325053453
[2026-01-10 09:20:17] 2026-01-10 08:19:41,414 | INFO     | current chi2=27.187825325053453 (change=16.071443651375215 %)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,415 | INFO     | right removable region: 116
[2026-01-10 09:20:17] 2026-01-10 08:19:41,415 | INFO     | sum of square deviations: 496575672.22222257
[2026-01-10 09:20:17] 2026-01-10 08:19:41,416 | INFO     | sum of deviations: 2241228657.111066
[2026-01-10 09:20:17] 2026-01-10 08:19:41,416 | INFO     | mean x: 1768029506.7777777
[2026-01-10 09:20:17] 2026-01-10 08:19:41,416 | INFO     | mean y: 1991237.2735042735
[2026-01-10 09:20:17] 2026-01-10 08:19:41,416 | INFO     | intersect: -7977776235.980832
[2026-01-10 09:20:17] 2026-01-10 08:19:41,416 | INFO     | chi2: 24.992601714377336
[2026-01-10 09:20:17] 2026-01-10 08:19:41,416 | INFO     | current chi2=24.992601714377336 (change=22.848077909676263 %)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,417 | INFO     | left removable region: 10
[2026-01-10 09:20:17] 2026-01-10 08:19:41,417 | INFO     | sum of square deviations: 369265340.3773592
[2026-01-10 09:20:17] 2026-01-10 08:19:41,418 | INFO     | sum of deviations: 4839926535.113206
[2026-01-10 09:20:17] 2026-01-10 08:19:41,418 | INFO     | mean x: 1768029476.3584905
[2026-01-10 09:20:17] 2026-01-10 08:19:41,418 | INFO     | mean y: 2163130.2075471696
[2026-01-10 09:20:17] 2026-01-10 08:19:41,418 | INFO     | intersect: -23171235079.180504
[2026-01-10 09:20:17] 2026-01-10 08:19:41,418 | INFO     | chi2: 13.971072854465863
[2026-01-10 09:20:17] 2026-01-10 08:19:41,418 | INFO     | current memory leak: 13.11 B/s (using 106 data points, chi2=13.97)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,426 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,426 | INFO     | ..............................
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . Timing measurements:
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . get job = 0 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . initial setup = 24 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . payload setup = 179 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . stage-in = 0 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . payload execution = 7572 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . stage-out = 3 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | . log creation = 1 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,427 | INFO     | ..............................
[2026-01-10 09:20:17] 2026-01-10 08:19:41,962 | INFO     | 
[2026-01-10 09:20:17] 2026-01-10 08:19:41,962 | INFO     | job summary report
[2026-01-10 09:20:17] 2026-01-10 08:19:41,962 | INFO     | --------------------------------------------------
[2026-01-10 09:20:17] 2026-01-10 08:19:41,962 | INFO     | PanDA job id: 6964539323
[2026-01-10 09:20:17] 2026-01-10 08:19:41,962 | INFO     | task id: 47962010
[2026-01-10 09:20:17] 2026-01-10 08:19:41,962 | INFO     | errors: (none)
[2026-01-10 09:20:17] 2026-01-10 08:19:41,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:20:17] 2026-01-10 08:19:41,963 | INFO     | pilot state: finished 
[2026-01-10 09:20:17] 2026-01-10 08:19:41,963 | INFO     | transexitcode: 0
[2026-01-10 09:20:17] 2026-01-10 08:19:41,963 | INFO     | exeerrorcode: 0
[2026-01-10 09:20:17] 2026-01-10 08:19:41,963 | INFO     | exeerrordiag: 
[2026-01-10 09:20:17] 2026-01-10 08:19:41,963 | INFO     | exitcode: 0
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | exitmsg: OK
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | cpuconsumptiontime: 19601 s
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | nevents: 50
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | neventsw: 0
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | pid: 22986
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | pgrp: 22986
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | corecount: 8
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | event service: False
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284625, 13: 2284625, 23: 2284681, 34: 2284709, 45: 2284865, 56: 2284893, 66: 2284921, 77: 2284949, 88: 2285005, 99: 2285313, 10
[2026-01-10 09:20:17] 2026-01-10 08:19:41,964 | INFO     | --------------------------------------------------
[2026-01-10 09:20:17] 2026-01-10 08:19:41,965 | INFO     | 
[2026-01-10 09:20:17] 2026-01-10 08:19:41,965 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 09:20:17] 2026-01-10 08:19:42,415 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,417 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:20:17] 2026-01-10 08:19:42,418 | INFO     | job 6964539323 has completed (purged errors)
[2026-01-10 09:20:17] 2026-01-10 08:19:42,418 | INFO     | overall cleanup function is called
[2026-01-10 09:20:17] 2026-01-10 08:19:43,441 | INFO     | --- collectZombieJob: --- 10, [22986]
[2026-01-10 09:20:17] 2026-01-10 08:19:43,441 | INFO     | zombie collector waiting for pid 22986
[2026-01-10 09:20:17] 2026-01-10 08:19:43,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:20:17] 2026-01-10 08:19:43,441 | INFO     | collected zombie processes
[2026-01-10 09:20:17] 2026-01-10 08:19:43,441 | INFO     | will attempt to kill all subprocesses of pid=22986
[2026-01-10 09:20:17] 2026-01-10 08:19:43,537 | INFO     | process IDs to be killed: [22986] (in reverse order)
[2026-01-10 09:20:17] 2026-01-10 08:19:44,693 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:20:17] 2026-01-10 08:19:44,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:20:17] 2026-01-10 08:19:44,696 | INFO     | did not find any defunct processes belonging to 22986
[2026-01-10 09:20:17] 2026-01-10 08:19:44,697 | INFO     | did not find any defunct processes belonging to 22986
[2026-01-10 09:20:17] 2026-01-10 08:19:44,698 | INFO     | ready for new job
[2026-01-10 09:20:17] 2026-01-10 08:19:44,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:20:17] 2026-01-10 08:19:44,700 | INFO     | ***************************************
[2026-01-10 09:20:17] 2026-01-10 08:19:44,700 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:20:17] 2026-01-10 08:19:44,700 | INFO     | ***************************************
[2026-01-10 09:20:17] 2026-01-10 08:19:44,700 | INFO     | 
[2026-01-10 09:20:17] 2026-01-10 08:19:44,701 | INFO     | pilot is running in a VM
[2026-01-10 09:20:17] 2026-01-10 08:19:44,701 | INFO     | architecture information:
[2026-01-10 09:20:17] 2026-01-10 08:19:44,701 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:20:17] 2026-01-10 08:19:44,895 | INFO     | cat /etc/os-release:
[2026-01-10 09:20:17] NAME="CentOS Linux"
[2026-01-10 09:20:17] VERSION="7 (Core)"
[2026-01-10 09:20:17] ID="centos"
[2026-01-10 09:20:17] ID_LIKE="rhel fedora"
[2026-01-10 09:20:17] VERSION_ID="7"
[2026-01-10 09:20:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:20:17] ANSI_COLOR="0;31"
[2026-01-10 09:20:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:20:17] HOME_URL="https://www.centos.org/"
[2026-01-10 09:20:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:20:17] 
[2026-01-10 09:20:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:20:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:20:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:20:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:20:17] 
[2026-01-10 09:20:17] 2026-01-10 08:19:44,895 | INFO     | ***************************************
[2026-01-10 09:20:17] 2026-01-10 08:19:45,399 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 09:20:17] 2026-01-10 08:19:45,631 | INFO     | sufficient remaining disk space (497106812928 B)
[2026-01-10 09:20:17] 2026-01-10 08:19:45,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:20:17] 2026-01-10 08:19:45,632 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:20:17] 2026-01-10 08:19:45,632 | INFO     | update_server=False
[2026-01-10 09:20:17] 2026-01-10 08:19:45,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:20:17] 2026-01-10 08:19:45,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:20:17] 2026-01-10 08:19:46,024 | INFO     | all job control threads have been joined
[2026-01-10 09:20:17] 2026-01-10 08:19:46,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:20:17] 2026-01-10 08:19:46,344 | INFO     | aborting loop
[2026-01-10 09:20:17] 2026-01-10 08:19:46,603 | INFO     | all payload control threads have been joined
[2026-01-10 09:20:17] 2026-01-10 08:19:46,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:20:17] 2026-01-10 08:19:46,624 | INFO     | all data control threads have been joined
[2026-01-10 09:20:17] 2026-01-10 08:19:46,638 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:46,664 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:46,828 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:46,985 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,030 | INFO     | [job] control thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,290 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,350 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,609 | INFO     | [payload] control thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,614 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,630 | INFO     | [data] control thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,640 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,825 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:47,852 | INFO     | [job] validate thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:48,097 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:48,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:20:17] 2026-01-10 08:19:52,564 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:19:55,879 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:20:17] 2026-01-10 08:19:56,885 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:20:17] 2026-01-10 08:20:06,884 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:20:17] 2026-01-10 08:20:06,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844998244160)>', '<ExcThread(monitor, started 139844260980480)>']
[2026-01-10 09:20:17] 2026-01-10 08:20:11,969 | INFO     | all workflow threads have been joined
[2026-01-10 09:20:17] 2026-01-10 08:20:11,969 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:20:17] 2026-01-10 08:20:11,969 | INFO     | traces error code: 0
[2026-01-10 09:20:17] 2026-01-10 08:20:11,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:20:17] 2026-01-10 08:20:13,671 | INFO     | PID=16501 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:20:17] 2026-01-10 08:20:13,671 | INFO     | .. there are 2 such processes running
[2026-01-10 09:20:17] 2026-01-10 08:20:13,677 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:20:17] 2026-01-10 08:20:13,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:20:17] 2026-01-10 08:20:13,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:20:17] 2026-01-10 08:20:13,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:20:17] 2026-01-10 08:20:13,677 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 09:20:17] 2026-01-10 08:20:13,678 | INFO     | [monitor] control thread has ended
[2026-01-10 09:20:17] 2026-01-10 08:20:13,995 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:20:17] 2026-01-10 08:20:14,087 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:20:17] 2026-01-10 08:20:14,132 [wrapper] pilotpid: 16501
[2026-01-10 09:20:17] 2026-01-10 08:20:14,224 [wrapper] Pilot exit status: 0
[2026-01-10 09:20:17] 2026-01-10 08:20:14,434 [wrapper] pandaids: 6964539323
[2026-01-10 09:20:17] 2026-01-10 08:20:14,532 [wrapper] cleanup supervisor_pilot  9020 16502
[2026-01-10 09:20:17] 2026-01-10 08:20:14,553 [wrapper] Test setup, not cleaning
[2026-01-10 09:20:17] 2026-01-10 08:20:14,573 [wrapper] apfmon messages muted
[2026-01-10 09:20:17] 2026-01-10 08:20:14,595 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:20:17] 2026-01-10 08:20:14,615 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:20:17]  *** Error codes and diagnostics ***
[2026-01-10 09:20:17]     "exeErrorCode": 0,
[2026-01-10 09:20:17]     "exeErrorDiag": "",
[2026-01-10 09:20:17]     "pilotErrorCode": 0,
[2026-01-10 09:20:17]     "pilotErrorDiag": "",
[2026-01-10 09:20:17]  *** Listing of results directory ***
[2026-01-10 09:20:17] total 433120
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:59 queuedata.json
[2026-01-10 09:20:17] -rwx------. 1 boinc boinc     36322 Jan  9 17:00 runpilot2-wrapper.sh
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc       100 Jan 10 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:20:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 06:59 run_atlas
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc       105 Jan 10 06:59 job.xml
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc      6390 Jan 10 06:59 init_data.xml
[2026-01-10 09:20:17] -rw-r--r--. 2 boinc boinc 392998403 Jan 10 06:59 EVNT.47962006._000042.pool.root.1
[2026-01-10 09:20:17] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:59 start_atlas.sh
[2026-01-10 09:20:17] drwxrwx--x. 2 boinc boinc        68 Jan 10 06:59 shared
[2026-01-10 09:20:17] -rw-r--r--. 2 boinc boinc    592620 Jan 10 06:59 input.tar.gz
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc         0 Jan 10 06:59 boinc_lockfile
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc      2890 Jan 10 07:00 pandaJob.out
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc    989374 Jan 10 07:04 agis_schedconf.cvmfs.json
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc   1516240 Jan 10 07:04 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:20:17] drwx------. 5 boinc boinc      4096 Jan 10 07:04 pilot3
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc       529 Jan 10 08:55 boinc_task_state.xml
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc  41869129 Jan 10 09:16 HITS.47962010._001887.pool.root.1
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc      1017 Jan 10 09:17 memory_monitor_summary.json
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc   1262108 Jan 10 09:17 log.47962010._001887.job.log.tgz.1
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc      7907 Jan 10 09:19 heartbeat.json
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc      8192 Jan 10 09:19 boinc_mmap_file
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc        27 Jan 10 09:19 wrapper_checkpoint.txt
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc        95 Jan 10 09:20 pilot_heartbeat.json
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc       890 Jan 10 09:20 pilotlog.txt
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc   1115868 Jan 10 09:20 log.47962010._001887.job.log.1
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc       353 Jan 10 09:20 output.list
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc       620 Jan 10 09:20 runtime_log
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc   2396160 Jan 10 09:20 result.tar.gz
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc      8816 Jan 10 09:20 runtime_log.err
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc       654 Jan 10 09:20 4KdMDmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbfmKDmh5LfFn.diag
[2026-01-10 09:20:17] -rw-r--r--. 1 boinc boinc     21330 Jan 10 09:20 stderr.txt
[2026-01-10 09:20:17] HITS file was successfully produced:
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc 41869129 Jan 10 09:16 shared/HITS.pool.root.1
[2026-01-10 09:20:17]  *** Contents of shared directory: ***
[2026-01-10 09:20:17] total 427612
[2026-01-10 09:20:17] -rw-r--r--. 2 boinc boinc 392998403 Jan 10 06:59 ATLAS.root_0
[2026-01-10 09:20:17] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:59 start_atlas.sh
[2026-01-10 09:20:17] -rw-r--r--. 2 boinc boinc    592620 Jan 10 06:59 input.tar.gz
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc  41869129 Jan 10 09:16 HITS.pool.root.1
[2026-01-10 09:20:17] -rw-------. 1 boinc boinc   2396160 Jan 10 09:20 result.tar.gz
09:20:19 (12739): run_atlas exited; CPU time 19621.936817
09:20:19 (12739): called boinc_finish(0)

</stderr_txt>
]]>

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