Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:49 (25862): wrapper (7.7.26015): starting
18:58:49 (25862): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:58:49] Arguments: --nthreads 8
[2026-01-09 18:58:49] Threads: 8
[2026-01-09 18:58:49] Checking for CVMFS
[2026-01-09 18:58:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:58:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:58:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:58:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:58:50] 2.11.2.0 2822 137349 86852 154961 1 58 13896280 20275200 1 130560 0 34718240 99.835 8501384 31271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:58:50] CVMFS is ok
[2026-01-09 18:58:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:58:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:58:50] Further information can be found at the LHC@home message board.
[2026-01-09 18:58:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:58:50] Checking for apptainer binary...
[2026-01-09 18:58:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:58:50] Running /usr/bin/apptainer --version
[2026-01-09 18:58:50] apptainer version 1.3.2-1.el7
[2026-01-09 18:58:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:58:52] c-204-37.aglt2.org
[2026-01-09 18:58:52] apptainer works
[2026-01-09 18:58:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:58:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:58:52] Starting ATLAS job with PandaID=6964539335
[2026-01-09 18:58:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:01:26]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:01:26]  scope=mc16_13TeV
[2026-01-09 20:01:26]  status=None
[2026-01-09 20:01:26]  status_code=0
[2026-01-09 20:01:26]  storage_token=
[2026-01-09 20:01:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6964539335/log.47962010._001899.job.log.tgz.1
[2026-01-09 20:01:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e3/e3/log.47962010._001899.job.log.tgz.1
[2026-01-09 20:01:26]  workdir=None
[2026-01-09 20:01:26] ]
[2026-01-09 20:01:26] 2026-01-10 01:00:39,716 | INFO     | transferring file log.47962010._001899.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6964539335/log.47962010._001899.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 20:01:26] 2026-01-10 01:00:39,716 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6964539335/log.47962010._001899.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._001899.job
[2026-01-09 20:01:26] 2026-01-10 01:00:39,745 | INFO     | adding to output.list: log.47962010._001899.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e3/e3/log.47962010._001899.job.log.tgz.
[2026-01-09 20:01:26] 2026-01-10 01:00:39,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 20:01:26] 2026-01-10 01:00:39,747 | INFO     | summary of transferred files:
[2026-01-09 20:01:26] 2026-01-10 01:00:39,747 | INFO     |  -- lfn=log.47962010._001899.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 20:01:26] 2026-01-10 01:00:39,748 | INFO     | stage-out finished correctly
[2026-01-09 20:01:26] 2026-01-10 01:00:41,339 | INFO     | time since job start (3689s) is within the limit (349056.0s)
[2026-01-09 20:01:26] 2026-01-10 01:00:41,984 | INFO     | monitor loop #277: job 0:6964539335 is in state 'finished'
[2026-01-09 20:01:26] 2026-01-10 01:00:41,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:26] 2026-01-10 01:00:42,341 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 20:01:26] 2026-01-10 01:00:43,347 | INFO     | time since job start (3691s) is within the limit (349056.0s)
[2026-01-09 20:01:26] 2026-01-10 01:00:43,861 | INFO     | job 6964539335 has state=finished
[2026-01-09 20:01:26] 2026-01-10 01:00:43,861 | INFO     | preparing for final server update for job 6964539335 in state='finished'
[2026-01-09 20:01:26] 2026-01-10 01:00:43,862 | INFO     | this job has now completed (state=finished)
[2026-01-09 20:01:26] 2026-01-10 01:00:43,862 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 20:01:26] 2026-01-10 01:00:43,862 | INFO     | log transfer has been attempted: DONE
[2026-01-09 20:01:26] 2026-01-10 01:00:43,863 | INFO     | job 6964539335 has finished - writing final server update
[2026-01-09 20:01:26] 2026-01-10 01:00:43,863 | INFO     | total number of processed events: 50 (read)
[2026-01-09 20:01:26] 2026-01-10 01:00:43,864 | INFO     | executing command: lscpu
[2026-01-09 20:01:26] 2026-01-10 01:00:43,891 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 20:01:26] 2026-01-10 01:00:44,487 | INFO     | monitor loop #278: job 0:6964539335 is in state 'finished'
[2026-01-09 20:01:26] 2026-01-10 01:00:44,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:26] 2026-01-10 01:00:45,352 | INFO     | time since job start (3693s) is within the limit (349056.0s)
[2026-01-09 20:01:26] 2026-01-10 01:00:46,991 | INFO     | monitor loop #279: job 0:6964539335 is in state 'finished'
[2026-01-09 20:01:26] 2026-01-10 01:00:46,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:26] 2026-01-10 01:00:47,358 | INFO     | time since job start (3695s) is within the limit (349056.0s)
[2026-01-09 20:01:26] 2026-01-10 01:00:49,364 | INFO     | time since job start (3697s) is within the limit (349056.0s)
[2026-01-09 20:01:26] 2026-01-10 01:00:49,492 | INFO     | monitor loop #280: job 0:6964539335 is in state 'finished'
[2026-01-09 20:01:26] 2026-01-10 01:00:49,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:01:26] 2026-01-10 01:00:51,876 | INFO     | time since job start (3699s) is within the limit (349056.0s)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,056 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 20:01:26] 2026-01-10 01:00:52,059 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.375
[2026-01-09 20:01:26] 2026-01-10 01:00:52,060 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539335/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,061 | INFO     | extracted standard info from prmon json
[2026-01-09 20:01:26] 2026-01-10 01:00:52,061 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:01:26] 2026-01-10 01:00:52,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:01:26] 2026-01-10 01:00:52,063 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:01:26] 2026-01-10 01:00:52,063 | INFO     | sum of square deviations: 46143705.54716989
[2026-01-09 20:01:26] 2026-01-10 01:00:52,064 | INFO     | sum of deviations: -7612193083.754717
[2026-01-09 20:01:26] 2026-01-10 01:00:52,064 | INFO     | mean x: 1768005077.3207548
[2026-01-09 20:01:26] 2026-01-10 01:00:52,064 | INFO     | mean y: 2459199.867924528
[2026-01-09 20:01:26] 2026-01-10 01:00:52,064 | INFO     | intersect: 291665121789.16907
[2026-01-09 20:01:26] 2026-01-10 01:00:52,064 | INFO     | chi2: 0.48626497551681985
[2026-01-09 20:01:26] 2026-01-10 01:00:52,065 | INFO     | current memory leak: -164.97 B/s (using 53 data points, chi2=0.49)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,065 | INFO     | could have reported an average CPU frequency of 1826 MHz (6 samples)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,065 | INFO     | ..............................
[2026-01-09 20:01:26] 2026-01-10 01:00:52,065 | INFO     | . Timing measurements:
[2026-01-09 20:01:26] 2026-01-10 01:00:52,065 | INFO     | . get job = 0 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,065 | INFO     | . initial setup = 2 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,066 | INFO     | . payload setup = 10 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,066 | INFO     | . stage-in = 0 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,066 | INFO     | . payload execution = 3653 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,066 | INFO     | . stage-out = 2 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,066 | INFO     | . log creation = 1 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,066 | INFO     | ..............................
[2026-01-09 20:01:26] 2026-01-10 01:00:52,316 | INFO     | 
[2026-01-09 20:01:26] 2026-01-10 01:00:52,316 | INFO     | job summary report
[2026-01-09 20:01:26] 2026-01-10 01:00:52,316 | INFO     | --------------------------------------------------
[2026-01-09 20:01:26] 2026-01-10 01:00:52,316 | INFO     | PanDA job id: 6964539335
[2026-01-09 20:01:26] 2026-01-10 01:00:52,317 | INFO     | task id: 47962010
[2026-01-09 20:01:26] 2026-01-10 01:00:52,317 | INFO     | errors: (none)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:01:26] 2026-01-10 01:00:52,317 | INFO     | pilot state: finished 
[2026-01-09 20:01:26] 2026-01-10 01:00:52,317 | INFO     | transexitcode: 0
[2026-01-09 20:01:26] 2026-01-10 01:00:52,317 | INFO     | exeerrorcode: 0
[2026-01-09 20:01:26] 2026-01-10 01:00:52,318 | INFO     | exeerrordiag: 
[2026-01-09 20:01:26] 2026-01-10 01:00:52,318 | INFO     | exitcode: 0
[2026-01-09 20:01:26] 2026-01-10 01:00:52,318 | INFO     | exitmsg: OK
[2026-01-09 20:01:26] 2026-01-10 01:00:52,318 | INFO     | cpuconsumptiontime: 23052 s
[2026-01-09 20:01:26] 2026-01-10 01:00:52,318 | INFO     | nevents: 50
[2026-01-09 20:01:26] 2026-01-10 01:00:52,318 | INFO     | neventsw: 0
[2026-01-09 20:01:26] 2026-01-10 01:00:52,319 | INFO     | pid: 4696
[2026-01-09 20:01:26] 2026-01-10 01:00:52,319 | INFO     | pgrp: 4696
[2026-01-09 20:01:26] 2026-01-10 01:00:52,319 | INFO     | corecount: 8
[2026-01-09 20:01:26] 2026-01-10 01:00:52,319 | INFO     | event service: False
[2026-01-09 20:01:26] 2026-01-10 01:00:52,319 | INFO     | sizes: {0: 2284569, 6: 2284831, 11: 2284859, 3668: 2311414, 3670: 2320408, 3673: 2320464, 3682: 2320838}
[2026-01-09 20:01:26] 2026-01-10 01:00:52,320 | INFO     | --------------------------------------------------
[2026-01-09 20:01:26] 2026-01-10 01:00:52,320 | INFO     | 
[2026-01-09 20:01:26] 2026-01-10 01:00:52,320 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:01:26] 2026-01-10 01:00:52,346 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,347 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,347 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,347 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,350 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,350 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:01:26] 2026-01-10 01:00:52,350 | INFO     | job 6964539335 has completed (purged errors)
[2026-01-09 20:01:26] 2026-01-10 01:00:52,351 | INFO     | overall cleanup function is called
[2026-01-09 20:01:26] 2026-01-10 01:00:53,366 | INFO     | --- collectZombieJob: --- 10, [4696]
[2026-01-09 20:01:26] 2026-01-10 01:00:53,366 | INFO     | zombie collector waiting for pid 4696
[2026-01-09 20:01:26] 2026-01-10 01:00:53,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:01:26] 2026-01-10 01:00:53,366 | INFO     | collected zombie processes
[2026-01-09 20:01:26] 2026-01-10 01:00:53,366 | INFO     | will attempt to kill all subprocesses of pid=4696
[2026-01-09 20:01:26] 2026-01-10 01:00:53,456 | INFO     | process IDs to be killed: [4696] (in reverse order)
[2026-01-09 20:01:26] 2026-01-10 01:00:53,512 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:01:26] 2026-01-10 01:00:53,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:01:26] 2026-01-10 01:00:53,516 | INFO     | did not find any defunct processes belonging to 4696
[2026-01-09 20:01:26] 2026-01-10 01:00:53,520 | INFO     | did not find any defunct processes belonging to 4696
[2026-01-09 20:01:26] 2026-01-10 01:00:53,520 | INFO     | ready for new job
[2026-01-09 20:01:26] 2026-01-10 01:00:53,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:01:26] 2026-01-10 01:00:54,272 | INFO     | ***************************************
[2026-01-09 20:01:26] 2026-01-10 01:00:54,275 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:01:26] 2026-01-10 01:00:54,275 | INFO     | ***************************************
[2026-01-09 20:01:26] 2026-01-10 01:00:54,275 | INFO     | 
[2026-01-09 20:01:26] 2026-01-10 01:00:54,276 | INFO     | architecture information:
[2026-01-09 20:01:26] 2026-01-10 01:00:54,277 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:01:26] 2026-01-10 01:00:54,296 | INFO     | cat /etc/os-release:
[2026-01-09 20:01:26] NAME="CentOS Linux"
[2026-01-09 20:01:26] VERSION="7 (Core)"
[2026-01-09 20:01:26] ID="centos"
[2026-01-09 20:01:26] ID_LIKE="rhel fedora"
[2026-01-09 20:01:26] VERSION_ID="7"
[2026-01-09 20:01:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:01:26] ANSI_COLOR="0;31"
[2026-01-09 20:01:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:01:26] HOME_URL="https://www.centos.org/"
[2026-01-09 20:01:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:01:26] 
[2026-01-09 20:01:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:01:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:01:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:01:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:01:26] 
[2026-01-09 20:01:26] 2026-01-10 01:00:54,297 | INFO     | ***************************************
[2026-01-09 20:01:26] 2026-01-10 01:00:54,800 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:01:26] 2026-01-10 01:00:54,820 | INFO     | sufficient remaining disk space (18338545664 B)
[2026-01-09 20:01:26] 2026-01-10 01:00:54,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:01:26] 2026-01-10 01:00:54,821 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:01:26] 2026-01-10 01:00:54,821 | INFO     | update_server=False
[2026-01-09 20:01:26] 2026-01-10 01:00:54,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:01:26] 2026-01-10 01:00:54,883 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:01:26] 2026-01-10 01:00:54,883 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:01:26] 2026-01-10 01:00:54,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:01:26] 2026-01-10 01:00:54,884 | INFO     | will abort loop
[2026-01-09 20:01:26] 2026-01-10 01:00:55,222 | INFO     | all data control threads have been joined
[2026-01-09 20:01:26] 2026-01-10 01:00:55,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:01:26] 2026-01-10 01:00:55,374 | INFO     | all payload control threads have been joined
[2026-01-09 20:01:26] 2026-01-10 01:00:55,827 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:55,890 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,036 | INFO     | all job control threads have been joined
[2026-01-09 20:01:26] 2026-01-10 01:00:56,124 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,228 | INFO     | [data] control thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,236 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,278 | INFO     | [job] validate thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,376 | INFO     | [payload] control thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,532 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,538 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,560 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,690 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:56,698 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:57,042 | INFO     | [job] control thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:57,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:01:26] 2026-01-10 01:00:57,365 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:00:57,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:01:26] 2026-01-10 01:00:58,171 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:01:01,445 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:01:26] 2026-01-10 01:01:17,713 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:01:26] 2026-01-10 01:01:19,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926776039232)>', '<ExcThread(monitor, started 139926167332608)>']
[2026-01-09 20:01:26] 2026-01-10 01:01:24,613 | INFO     | all workflow threads have been joined
[2026-01-09 20:01:26] 2026-01-10 01:01:24,613 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:01:26] 2026-01-10 01:01:24,614 | INFO     | traces error code: 0
[2026-01-09 20:01:26] 2026-01-10 01:01:24,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:01:26] 2026-01-10 01:01:25,094 | INFO     | PID=29944 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 20:01:26] 2026-01-10 01:01:25,691 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:01:26] 2026-01-10 01:01:25,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:01:26] 2026-01-10 01:01:25,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:01:26] 2026-01-10 01:01:25,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:01:26] 2026-01-10 01:01:25,692 | INFO     | [monitor] control thread has ended
[2026-01-09 20:01:26] 2026-01-10 01:01:25,797 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:01:26] 2026-01-10 01:01:25,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:01:26] 2026-01-10 01:01:25,806 [wrapper] pilotpid: 29944
[2026-01-09 20:01:26] 2026-01-10 01:01:25,810 [wrapper] Pilot exit status: 0
[2026-01-09 20:01:26] 2026-01-10 01:01:25,828 [wrapper] pandaids: 6964539335
[2026-01-09 20:01:26] 2026-01-10 01:01:25,879 [wrapper] cleanup supervisor_pilot   792 29945
[2026-01-09 20:01:26] 2026-01-10 01:01:25,885 [wrapper] Test setup, not cleaning
[2026-01-09 20:01:26] 2026-01-10 01:01:25,890 [wrapper] apfmon messages muted
[2026-01-09 20:01:26] 2026-01-10 01:01:25,895 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:01:26] 2026-01-10 01:01:25,899 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:01:26]  *** Error codes and diagnostics ***
[2026-01-09 20:01:26]     "exeErrorCode": 0,
[2026-01-09 20:01:26]     "exeErrorDiag": "",
[2026-01-09 20:01:26]     "pilotErrorCode": 0,
[2026-01-09 20:01:26]     "pilotErrorDiag": "",
[2026-01-09 20:01:26]  *** Listing of results directory ***
[2026-01-09 20:01:26] total 437328
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 20:01:26] -rwx------ 1 boincer umatlas     36322 Jan  9 11:00 runpilot2-wrapper.sh
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 11:00 queuedata.json
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:01:26] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:58 run_atlas
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:58 job.xml
[2026-01-09 20:01:26] -rw-r--r-- 2 boincer umatlas 392998403 Jan  9 18:58 EVNT.47962006._000042.pool.root.1
[2026-01-09 20:01:26] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:58 start_atlas.sh
[2026-01-09 20:01:26] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:58 shared
[2026-01-09 20:01:26] -rw-r--r-- 2 boincer umatlas    592613 Jan  9 18:58 input.tar.gz
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:58 boinc_lockfile
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas      2890 Jan  9 18:58 pandaJob.out
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas        57 Jan  9 18:58 setup.sh.local
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas    989374 Jan  9 18:59 agis_schedconf.cvmfs.json
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas   1516240 Jan  9 18:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:01:26] drwx------ 5 boincer umatlas      4096 Jan  9 18:59 pilot3
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas       529 Jan  9 19:47 boinc_task_state.xml
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 19:56 init_data.xml
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas  47393778 Jan  9 20:00 HITS.47962010._001899.pool.root.1
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas      1051 Jan  9 20:00 memory_monitor_summary.json
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas   1205249 Jan  9 20:00 log.47962010._001899.job.log.tgz.1
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas      8620 Jan  9 20:00 heartbeat.json
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 20:01 boinc_mmap_file
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas        27 Jan  9 20:01 wrapper_checkpoint.txt
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas        95 Jan  9 20:01 pilot_heartbeat.json
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas       745 Jan  9 20:01 pilotlog.txt
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas    552702 Jan  9 20:01 log.47962010._001899.job.log.1
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas       353 Jan  9 20:01 output.list
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas       620 Jan  9 20:01 runtime_log
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas   1781760 Jan  9 20:01 result.tar.gz
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas      9342 Jan  9 20:01 runtime_log.err
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas       659 Jan  9 20:01 lc4MDmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnfmKDmu22yTo.diag
[2026-01-09 20:01:26] -rw-r--r-- 1 boincer umatlas     22013 Jan  9 20:01 stderr.txt
[2026-01-09 20:01:26] HITS file was successfully produced:
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas 47393778 Jan  9 20:00 shared/HITS.pool.root.1
[2026-01-09 20:01:26]  *** Contents of shared directory: ***
[2026-01-09 20:01:26] total 432412
[2026-01-09 20:01:26] -rw-r--r-- 2 boincer umatlas 392998403 Jan  9 18:58 ATLAS.root_0
[2026-01-09 20:01:26] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:58 start_atlas.sh
[2026-01-09 20:01:26] -rw-r--r-- 2 boincer umatlas    592613 Jan  9 18:58 input.tar.gz
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas  47393778 Jan  9 20:00 HITS.pool.root.1
[2026-01-09 20:01:26] -rw------- 1 boincer umatlas   1781760 Jan  9 20:01 result.tar.gz
20:01:27 (25862): run_atlas exited; CPU time 22786.809636
20:01:27 (25862): called boinc_finish(0)

</stderr_txt>
]]>

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