Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:32:36 (756558): wrapper (7.7.26015): starting
03:32:36 (756558): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 03:32:36] Arguments: --nthreads 12
[2026-01-10 03:32:36] Threads: 12
[2026-01-10 03:32:36] Checking for CVMFS
[2026-01-10 03:32:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 03:32:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 03:32:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 03:32:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 03:32:36] 2.11.0.0 331953 2595 98200 154966 3 228 3486522 6144001 14041 130560 0 31221668 99.999 224283 284 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 03:32:36] CVMFS is ok
[2026-01-10 03:32:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 03:32:36] Checking for apptainer binary...
[2026-01-10 03:32:36] apptainer is not installed, using version from CVMFS
[2026-01-10 03:32:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 03:32:36] radiat0r
[2026-01-10 03:32:36] apptainer works
[2026-01-10 03:32:36] Set ATHENA_PROC_NUMBER=12
[2026-01-10 03:32:36] Set ATHENA_CORE_NUMBER=12
[2026-01-10 03:32:36] Starting ATLAS job with PandaID=6964539153
[2026-01-10 03:32:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:31:26]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:31:26]  storage_token=
[2026-01-10 04:31:26]  surl=/var/lib/boinc/slots/18/PanDA_Pilot-6964539153/log.47898826._040037.job.log.tgz.1
[2026-01-10 04:31:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/1d/log.47898826._040037.job.log.tgz.1
[2026-01-10 04:31:26]  workdir=None
[2026-01-10 04:31:26] ]
[2026-01-10 04:31:26] 2026-01-10 04:30:43,038 | INFO     | transferring file log.47898826._040037.job.log.tgz.1 from /var/lib/boinc/slots/18/PanDA_Pilot-6964539153/log.47898826._040037.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-10 04:31:26] 2026-01-10 04:30:43,038 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/18/PanDA_Pilot-6964539153/log.47898826._040037.job.log.tgz.1 /var/lib/boinc/slots/18/log.47898826._040037.j
[2026-01-10 04:31:26] 2026-01-10 04:30:43,062 | INFO     | adding to output.list: log.47898826._040037.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/1d/log.47898826._040037.job.log.tg
[2026-01-10 04:31:26] 2026-01-10 04:30:43,063 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 04:31:26] 2026-01-10 04:30:43,063 | INFO     | summary of transferred files:
[2026-01-10 04:31:26] 2026-01-10 04:30:43,063 | INFO     |  -- lfn=log.47898826._040037.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 04:31:26] 2026-01-10 04:30:43,063 | INFO     | stage-out finished correctly
[2026-01-10 04:31:26] 2026-01-10 04:30:43,556 | INFO     | PID=761271 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 04:31:26] 2026-01-10 04:30:44,557 | INFO     | time since job start (3472s) is within the limit (349056.0s)
[2026-01-10 04:31:26] 2026-01-10 04:30:45,257 | INFO     | monitor loop #248: job 0:6964539153 is in state 'finished'
[2026-01-10 04:31:26] 2026-01-10 04:30:45,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:31:26] 2026-01-10 04:30:46,280 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 04:31:26] 2026-01-10 04:30:46,562 | INFO     | time since job start (3474s) is within the limit (349056.0s)
[2026-01-10 04:31:26] 2026-01-10 04:30:47,674 | INFO     | job 6964539153 has state=finished
[2026-01-10 04:31:26] 2026-01-10 04:30:47,674 | INFO     | preparing for final server update for job 6964539153 in state='finished'
[2026-01-10 04:31:26] 2026-01-10 04:30:47,674 | INFO     | this job has now completed (state=finished)
[2026-01-10 04:31:26] 2026-01-10 04:30:47,675 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 04:31:26] 2026-01-10 04:30:47,675 | INFO     | log transfer has been attempted: DONE
[2026-01-10 04:31:26] 2026-01-10 04:30:47,675 | INFO     | job 6964539153 has finished - writing final server update
[2026-01-10 04:31:26] 2026-01-10 04:30:47,675 | INFO     | total number of processed events: 400 (read)
[2026-01-10 04:31:26] 2026-01-10 04:30:47,678 | INFO     | executing command: lscpu
[2026-01-10 04:31:26] 2026-01-10 04:30:47,761 | INFO     | monitor loop #249: job 0:6964539153 is in state 'finished'
[2026-01-10 04:31:26] 2026-01-10 04:30:47,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:31:26] 2026-01-10 04:30:47,832 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 04:31:26] 2026-01-10 04:30:48,568 | INFO     | time since job start (3476s) is within the limit (349056.0s)
[2026-01-10 04:31:26] 2026-01-10 04:30:50,264 | INFO     | monitor loop #250: job 0:6964539153 is in state 'finished'
[2026-01-10 04:31:26] 2026-01-10 04:30:50,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:31:26] 2026-01-10 04:30:50,572 | INFO     | time since job start (3478s) is within the limit (349056.0s)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,576 | INFO     | time since job start (3480s) is within the limit (349056.0s)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,699 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 04:31:26] 2026-01-10 04:30:52,768 | INFO     | monitor loop #251: job 0:6964539153 is in state 'finished'
[2026-01-10 04:31:26] 2026-01-10 04:30:52,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,770 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 1868.7222929687498
[2026-01-10 04:31:26] 2026-01-10 04:30:52,821 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6964539153/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,821 | INFO     | extracted standard info from prmon json
[2026-01-10 04:31:26] 2026-01-10 04:30:52,821 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:31:26] 2026-01-10 04:30:52,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:31:26] 2026-01-10 04:30:52,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:31:26] 2026-01-10 04:30:52,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | sum of square deviations: 38744912.5
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | sum of deviations: 12386965.000000123
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | mean x: 1768017805.5
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | mean y: 2744193.36
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | intersect: -562500977.2441541
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | chi2: 0.08446065453151981
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | current memory leak: 0.32 B/s (using 50 data points, chi2=0.08)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,823 | INFO     | could have reported an average CPU frequency of 2275 MHz (5 samples)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | ..............................
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . Timing measurements:
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . get job = 0 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . initial setup = 3 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . payload setup = 8 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . stage-in = 0 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . payload execution = 3439 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . stage-out = 0 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | . log creation = 0 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,824 | INFO     | ..............................
[2026-01-10 04:31:26] 2026-01-10 04:30:52,881 | INFO     | 
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | job summary report
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | --------------------------------------------------
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | PanDA job id: 6964539153
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | task id: 47898826
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | errors: (none)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | pilot state: finished 
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | transexitcode: 0
[2026-01-10 04:31:26] 2026-01-10 04:30:52,882 | INFO     | exeerrorcode: 0
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | exeerrordiag: 
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | exitcode: 0
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | exitmsg: OK
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | cpuconsumptiontime: 36120 s
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | nevents: 400
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | neventsw: 0
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | pid: 769410
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | pgrp: 769410
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | corecount: 12
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | event service: False
[2026-01-10 04:31:26] 2026-01-10 04:30:52,883 | INFO     | sizes: {0: 2283750, 1: 2283949, 8: 2284211, 12: 2284239, 3451: 2310004, 3452: 2319004, 3455: 2319188, 3462: 2319414}
[2026-01-10 04:31:26] 2026-01-10 04:30:52,884 | INFO     | --------------------------------------------------
[2026-01-10 04:31:26] 2026-01-10 04:30:52,884 | INFO     | 
[2026-01-10 04:31:26] 2026-01-10 04:30:52,884 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-10 04:31:26] 2026-01-10 04:30:52,907 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,909 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,910 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:31:26] 2026-01-10 04:30:52,910 | INFO     | job 6964539153 has completed (purged errors)
[2026-01-10 04:31:26] 2026-01-10 04:30:52,910 | INFO     | overall cleanup function is called
[2026-01-10 04:31:26] 2026-01-10 04:30:53,920 | INFO     | --- collectZombieJob: --- 10, [769410]
[2026-01-10 04:31:26] 2026-01-10 04:30:53,921 | INFO     | zombie collector waiting for pid 769410
[2026-01-10 04:31:26] 2026-01-10 04:30:53,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:31:26] 2026-01-10 04:30:53,921 | INFO     | collected zombie processes
[2026-01-10 04:31:26] 2026-01-10 04:30:53,921 | INFO     | will attempt to kill all subprocesses of pid=769410
[2026-01-10 04:31:26] 2026-01-10 04:30:54,336 | INFO     | process IDs to be killed: [769410] (in reverse order)
[2026-01-10 04:31:26] 2026-01-10 04:30:54,492 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:31:26] 2026-01-10 04:30:54,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:31:26] 2026-01-10 04:30:54,520 | INFO     | did not find any defunct processes belonging to 769410
[2026-01-10 04:31:26] 2026-01-10 04:30:54,544 | INFO     | did not find any defunct processes belonging to 769410
[2026-01-10 04:31:26] 2026-01-10 04:30:54,545 | INFO     | ready for new job
[2026-01-10 04:31:26] 2026-01-10 04:30:54,545 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:31:26] 2026-01-10 04:30:54,547 | INFO     | ***************************************
[2026-01-10 04:31:26] 2026-01-10 04:30:54,547 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:31:26] 2026-01-10 04:30:54,547 | INFO     | ***************************************
[2026-01-10 04:31:26] 2026-01-10 04:30:54,547 | INFO     | 
[2026-01-10 04:31:26] 2026-01-10 04:30:54,581 | INFO     | architecture information:
[2026-01-10 04:31:26] 2026-01-10 04:30:54,582 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:31:26] 2026-01-10 04:30:54,603 | INFO     | cat /etc/os-release:
[2026-01-10 04:31:26] NAME="CentOS Linux"
[2026-01-10 04:31:26] VERSION="7 (Core)"
[2026-01-10 04:31:26] ID="centos"
[2026-01-10 04:31:26] ID_LIKE="rhel fedora"
[2026-01-10 04:31:26] VERSION_ID="7"
[2026-01-10 04:31:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:31:26] ANSI_COLOR="0;31"
[2026-01-10 04:31:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:31:26] HOME_URL="https://www.centos.org/"
[2026-01-10 04:31:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:31:26] 
[2026-01-10 04:31:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:31:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:31:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:31:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:31:26] 
[2026-01-10 04:31:26] 2026-01-10 04:30:54,603 | INFO     | ***************************************
[2026-01-10 04:31:26] 2026-01-10 04:30:55,104 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-10 04:31:26] 2026-01-10 04:30:55,127 | INFO     | sufficient remaining disk space (1712443097088 B)
[2026-01-10 04:31:26] 2026-01-10 04:30:55,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:31:26] 2026-01-10 04:30:55,128 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:31:26] 2026-01-10 04:30:55,128 | INFO     | update_server=False
[2026-01-10 04:31:26] 2026-01-10 04:30:55,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:31:26] 2026-01-10 04:30:55,271 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 04:31:26] 2026-01-10 04:30:55,272 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 04:31:26] 2026-01-10 04:30:55,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:31:26] 2026-01-10 04:30:55,272 | INFO     | will abort loop
[2026-01-10 04:31:26] 2026-01-10 04:30:55,403 | INFO     | all payload control threads have been joined
[2026-01-10 04:31:26] 2026-01-10 04:30:55,513 | INFO     | all data control threads have been joined
[2026-01-10 04:31:26] 2026-01-10 04:30:56,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:31:26] 2026-01-10 04:30:56,134 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,277 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,296 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,324 | INFO     | all job control threads have been joined
[2026-01-10 04:31:26] 2026-01-10 04:30:56,408 | INFO     | [payload] control thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,471 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,521 | INFO     | [data] control thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,635 | INFO     | [job] validate thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,722 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:56,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:31:26] 2026-01-10 04:30:56,892 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:57,138 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:57,271 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:57,329 | INFO     | [job] control thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:57,405 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:31:26] 2026-01-10 04:30:57,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:31:26] 2026-01-10 04:30:58,140 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:30:58,898 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:31:00,898 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:31:05,558 | INFO     | job.realtimelogging is not enabled
[2026-01-10 04:31:26] 2026-01-10 04:31:06,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:31:26] 2026-01-10 04:31:08,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667587348288)>', '<ExcThread(monitor, started 139667001292544)>']
[2026-01-10 04:31:26] 2026-01-10 04:31:13,162 | INFO     | all workflow threads have been joined
[2026-01-10 04:31:26] 2026-01-10 04:31:13,162 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:31:26] 2026-01-10 04:31:13,163 | INFO     | traces error code: 0
[2026-01-10 04:31:26] 2026-01-10 04:31:13,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:31:26] 2026-01-10 04:31:26,161 | INFO     | PID=761271 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:31:26] 2026-01-10 04:31:26,161 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:31:26] 2026-01-10 04:31:26,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:31:26] 2026-01-10 04:31:26,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:31:26] 2026-01-10 04:31:26,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:31:26] 2026-01-10 04:31:26,162 | INFO     | [monitor] control thread has ended
[2026-01-10 04:31:26] 2026-01-10 04:31:26,253 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:31:26] 2026-01-10 04:31:26,257 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:31:26] 2026-01-10 04:31:26,262 [wrapper] pilotpid: 761271
[2026-01-10 04:31:26] 2026-01-10 04:31:26,266 [wrapper] Pilot exit status: 0
[2026-01-10 04:31:26] 2026-01-10 04:31:26,281 [wrapper] pandaids: 6964539153
[2026-01-10 04:31:26] 2026-01-10 04:31:26,396 [wrapper] cleanup supervisor_pilot  860666 761272
[2026-01-10 04:31:26] 2026-01-10 04:31:26,401 [wrapper] Test setup, not cleaning
[2026-01-10 04:31:26] 2026-01-10 04:31:26,406 [wrapper] apfmon messages muted
[2026-01-10 04:31:26] 2026-01-10 04:31:26,410 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:31:26] 2026-01-10 04:31:26,414 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:31:26]  *** Error codes and diagnostics ***
[2026-01-10 04:31:26]     "exeErrorCode": 0,
[2026-01-10 04:31:26]     "exeErrorDiag": "",
[2026-01-10 04:31:26]     "pilotErrorCode": 0,
[2026-01-10 04:31:26]     "pilotErrorDiag": "",
[2026-01-10 04:31:26]  *** Listing of results directory ***
[2026-01-10 04:31:26] total 438084
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc    579449 Jan  9 15:55 pilot3.tar.gz
[2026-01-10 04:31:26] -rwx------ 1 boinc boinc     36322 Jan  9 15:59 runpilot2-wrapper.sh
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc      5112 Jan  9 15:59 queuedata.json
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc       100 Jan 10 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:31:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 03:32 run_atlas
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc       105 Jan 10 03:32 job.xml
[2026-01-10 04:31:26] -rw-r--r-- 2 boinc boinc 224159761 Jan 10 03:32 EVNT.47898824._001158.pool.root.1
[2026-01-10 04:31:26] -rw-r--r-- 2 boinc boinc     15847 Jan 10 03:32 start_atlas.sh
[2026-01-10 04:31:26] drwxrwx--x 2 boinc boinc      4096 Jan 10 03:32 shared
[2026-01-10 04:31:26] -rw-r--r-- 2 boinc boinc    592394 Jan 10 03:32 input.tar.gz
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc      9416 Jan 10 03:32 init_data.xml
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc         0 Jan 10 03:32 boinc_setup_complete
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc         0 Jan 10 03:32 boinc_lockfile
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc      2519 Jan 10 03:32 pandaJob.out
[2026-01-10 04:31:26] -rw------- 1 boinc boinc    989374 Jan 10 03:32 agis_schedconf.cvmfs.json
[2026-01-10 04:31:26] -rw------- 1 boinc boinc   1516240 Jan 10 03:32 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:31:26] drwx------ 5 boinc boinc      4096 Jan 10 03:32 pilot3
[2026-01-10 04:31:26] -rw------- 1 boinc boinc 218776805 Jan 10 04:30 HITS.47898826._040037.pool.root.1
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc       529 Jan 10 04:30 boinc_task_state.xml
[2026-01-10 04:31:26] -rw------- 1 boinc boinc      1028 Jan 10 04:30 memory_monitor_summary.json
[2026-01-10 04:31:26] -rw------- 1 boinc boinc    359350 Jan 10 04:30 log.47898826._040037.job.log.tgz.1
[2026-01-10 04:31:26] -rw------- 1 boinc boinc      7746 Jan 10 04:30 heartbeat.json
[2026-01-10 04:31:26] -rw------- 1 boinc boinc        95 Jan 10 04:30 pilot_heartbeat.json
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc      8192 Jan 10 04:31 boinc_mmap_file
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc        27 Jan 10 04:31 wrapper_checkpoint.txt
[2026-01-10 04:31:26] -rw------- 1 boinc boinc       746 Jan 10 04:31 pilotlog.txt
[2026-01-10 04:31:26] -rw------- 1 boinc boinc    512703 Jan 10 04:31 log.47898826._040037.job.log.1
[2026-01-10 04:31:26] -rw------- 1 boinc boinc       357 Jan 10 04:31 output.list
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc       620 Jan 10 04:31 runtime_log
[2026-01-10 04:31:26] -rw------- 1 boinc boinc    890880 Jan 10 04:31 result.tar.gz
[2026-01-10 04:31:26] -rw------- 1 boinc boinc       643 Jan 10 04:31 SxILDmK4Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvemKDmHvGKxn.diag
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc      8788 Jan 10 04:31 runtime_log.err
[2026-01-10 04:31:26] -rw-r--r-- 1 boinc boinc     22049 Jan 10 04:31 stderr.txt
[2026-01-10 04:31:26] HITS file was successfully produced:
[2026-01-10 04:31:26] -rw------- 1 boinc boinc 218776805 Jan 10 04:30 shared/HITS.pool.root.1
[2026-01-10 04:31:26]  *** Contents of shared directory: ***
[2026-01-10 04:31:26] total 434036
[2026-01-10 04:31:26] -rw-r--r-- 2 boinc boinc 224159761 Jan 10 03:32 ATLAS.root_0
[2026-01-10 04:31:26] -rw-r--r-- 2 boinc boinc     15847 Jan 10 03:32 start_atlas.sh
[2026-01-10 04:31:26] -rw-r--r-- 2 boinc boinc    592394 Jan 10 03:32 input.tar.gz
[2026-01-10 04:31:26] -rw------- 1 boinc boinc 218776805 Jan 10 04:30 HITS.pool.root.1
[2026-01-10 04:31:26] -rw------- 1 boinc boinc    890880 Jan 10 04:31 result.tar.gz
04:31:28 (756558): run_atlas exited; CPU time 36299.887004
04:31:28 (756558): called boinc_finish(0)

</stderr_txt>
]]>

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