Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:04:11 (26951): wrapper (7.7.26015): starting
19:04:11 (26951): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 19:04:11] Arguments: --nthreads 12
[2026-01-09 19:04:11] Threads: 12
[2026-01-09 19:04:11] Checking for CVMFS
[2026-01-09 19:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:04:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:04:11] 2.11.2.0 3035 351692 96252 154961 3 59 12488342 20275201 1 130560 3 149049349 99.955 20972573 16299 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:04:11] CVMFS is ok
[2026-01-09 19:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:04:11] Further information can be found at the LHC@home message board.
[2026-01-09 19:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:04:11] Checking for apptainer binary...
[2026-01-09 19:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:04:11] Running /usr/bin/apptainer --version
[2026-01-09 19:04:11] apptainer version 1.3.2-1.el7
[2026-01-09 19:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:04:13] c-205-31.aglt2.org
[2026-01-09 19:04:13] apptainer works
[2026-01-09 19:04:13] Set ATHENA_PROC_NUMBER=12
[2026-01-09 19:04:13] Set ATHENA_CORE_NUMBER=12
[2026-01-09 19:04:13] Starting ATLAS job with PandaID=6964539307
[2026-01-09 19:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:41:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:41:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 19:41:36]  replicas=None
[2026-01-09 19:41:36]  scope=mc16_13TeV
[2026-01-09 19:41:36]  status=None
[2026-01-09 19:41:36]  status_code=0
[2026-01-09 19:41:36]  storage_token=
[2026-01-09 19:41:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6964539307/log.47962010._001871.job.log.tgz.1
[2026-01-09 19:41:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/bc/f2/log.47962010._001871.job.log.tgz.1
[2026-01-09 19:41:36]  workdir=None
[2026-01-09 19:41:36] ]
[2026-01-09 19:41:36] 2026-01-10 00:40:40,130 | INFO     | transferring file log.47962010._001871.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6964539307/log.47962010._001871.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 19:41:36] 2026-01-10 00:40:40,130 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6964539307/log.47962010._001871.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._001871.job
[2026-01-09 19:41:36] 2026-01-10 00:40:40,152 | INFO     | adding to output.list: log.47962010._001871.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/bc/f2/log.47962010._001871.job.log.tgz.
[2026-01-09 19:41:36] 2026-01-10 00:40:40,153 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 19:41:36] 2026-01-10 00:40:40,153 | INFO     | summary of transferred files:
[2026-01-09 19:41:36] 2026-01-10 00:40:40,153 | INFO     |  -- lfn=log.47962010._001871.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 19:41:36] 2026-01-10 00:40:40,154 | INFO     | stage-out finished correctly
[2026-01-09 19:41:36] 2026-01-10 00:40:41,010 | INFO     | monitor loop #170: job 0:6964539307 is in state 'finished'
[2026-01-09 19:41:36] 2026-01-10 00:40:41,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:41:36] 2026-01-10 00:40:41,950 | INFO     | time since job start (2173s) is within the limit (349056.0s)
[2026-01-09 19:41:36] 2026-01-10 00:40:43,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 19:41:36] 2026-01-10 00:40:43,512 | INFO     | monitor loop #171: job 0:6964539307 is in state 'finished'
[2026-01-09 19:41:36] 2026-01-10 00:40:43,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:41:36] 2026-01-10 00:40:43,762 | INFO     | job 6964539307 has state=finished
[2026-01-09 19:41:36] 2026-01-10 00:40:43,762 | INFO     | preparing for final server update for job 6964539307 in state='finished'
[2026-01-09 19:41:36] 2026-01-10 00:40:43,763 | INFO     | this job has now completed (state=finished)
[2026-01-09 19:41:36] 2026-01-10 00:40:43,763 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 19:41:36] 2026-01-10 00:40:43,763 | INFO     | log transfer has been attempted: DONE
[2026-01-09 19:41:36] 2026-01-10 00:40:43,763 | INFO     | job 6964539307 has finished - writing final server update
[2026-01-09 19:41:36] 2026-01-10 00:40:43,764 | INFO     | total number of processed events: 50 (read)
[2026-01-09 19:41:36] 2026-01-10 00:40:43,765 | INFO     | executing command: lscpu
[2026-01-09 19:41:36] 2026-01-10 00:40:43,790 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:41:36] 2026-01-10 00:40:43,955 | INFO     | time since job start (2175s) is within the limit (349056.0s)
[2026-01-09 19:41:36] 2026-01-10 00:40:45,961 | INFO     | time since job start (2177s) is within the limit (349056.0s)
[2026-01-09 19:41:36] 2026-01-10 00:40:46,015 | INFO     | monitor loop #172: job 0:6964539307 is in state 'finished'
[2026-01-09 19:41:36] 2026-01-10 00:40:46,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:41:36] 2026-01-10 00:40:47,080 | INFO     | PID=30630 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:41:36] 2026-01-10 00:40:48,080 | INFO     | time since job start (2180s) is within the limit (349056.0s)
[2026-01-09 19:41:36] 2026-01-10 00:40:48,518 | INFO     | monitor loop #173: job 0:6964539307 is in state 'finished'
[2026-01-09 19:41:36] 2026-01-10 00:40:48,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,110 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 19:41:36] 2026-01-10 00:40:49,114 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-09 19:41:36] 2026-01-10 00:40:49,116 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539307/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,117 | INFO     | extracted standard info from prmon json
[2026-01-09 19:41:36] 2026-01-10 00:40:49,117 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:41:36] 2026-01-10 00:40:49,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:41:36] 2026-01-10 00:40:49,119 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:41:36] 2026-01-10 00:40:49,119 | INFO     | sum of square deviations: 7551314.689655175
[2026-01-09 19:41:36] 2026-01-10 00:40:49,119 | INFO     | sum of deviations: -3311599549.793103
[2026-01-09 19:41:36] 2026-01-10 00:40:49,119 | INFO     | mean x: 1768004658.1034484
[2026-01-09 19:41:36] 2026-01-10 00:40:49,119 | INFO     | mean y: 2809785.9310344825
[2026-01-09 19:41:36] 2026-01-10 00:40:49,119 | INFO     | intersect: 775354343980.1509
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | chi2: 0.44519396410325196
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | current memory leak: -438.55 B/s (using 29 data points, chi2=0.45)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | could have reported an average CPU frequency of 1833 MHz (5 samples)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | ..............................
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | . Timing measurements:
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | . get job = 0 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,120 | INFO     | . initial setup = 2 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,121 | INFO     | . payload setup = 9 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,121 | INFO     | . stage-in = 0 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,121 | INFO     | . payload execution = 2142 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,121 | INFO     | . stage-out = 0 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,121 | INFO     | . log creation = 0 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,121 | INFO     | ..............................
[2026-01-09 19:41:36] 2026-01-10 00:40:49,418 | INFO     | 
[2026-01-09 19:41:36] 2026-01-10 00:40:49,419 | INFO     | job summary report
[2026-01-09 19:41:36] 2026-01-10 00:40:49,419 | INFO     | --------------------------------------------------
[2026-01-09 19:41:36] 2026-01-10 00:40:49,419 | INFO     | PanDA job id: 6964539307
[2026-01-09 19:41:36] 2026-01-10 00:40:49,419 | INFO     | task id: 47962010
[2026-01-09 19:41:36] 2026-01-10 00:40:49,419 | INFO     | errors: (none)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | pilot state: finished 
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | transexitcode: 0
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | exeerrorcode: 0
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | exeerrordiag: 
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | exitcode: 0
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | exitmsg: OK
[2026-01-09 19:41:36] 2026-01-10 00:40:49,420 | INFO     | cpuconsumptiontime: 19129 s
[2026-01-09 19:41:36] 2026-01-10 00:40:49,421 | INFO     | nevents: 50
[2026-01-09 19:41:36] 2026-01-10 00:40:49,421 | INFO     | neventsw: 0
[2026-01-09 19:41:36] 2026-01-10 00:40:49,421 | INFO     | pid: 4723
[2026-01-09 19:41:36] 2026-01-10 00:40:49,421 | INFO     | pgrp: 4723
[2026-01-09 19:41:36] 2026-01-10 00:40:49,421 | INFO     | corecount: 12
[2026-01-09 19:41:36] 2026-01-10 00:40:49,421 | INFO     | event service: False
[2026-01-09 19:41:36] 2026-01-10 00:40:49,422 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 2154: 2310752, 2155: 2319746, 2158: 2319802, 2164: 2320208}
[2026-01-09 19:41:36] 2026-01-10 00:40:49,422 | INFO     | --------------------------------------------------
[2026-01-09 19:41:36] 2026-01-10 00:40:49,422 | INFO     | 
[2026-01-09 19:41:36] 2026-01-10 00:40:49,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:41:36] 2026-01-10 00:40:49,517 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,518 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,526 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,526 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:41:36] 2026-01-10 00:40:49,528 | INFO     | job 6964539307 has completed (purged errors)
[2026-01-09 19:41:36] 2026-01-10 00:40:49,529 | INFO     | overall cleanup function is called
[2026-01-09 19:41:36] 2026-01-10 00:40:50,542 | INFO     | --- collectZombieJob: --- 10, [4723]
[2026-01-09 19:41:36] 2026-01-10 00:40:50,542 | INFO     | zombie collector waiting for pid 4723
[2026-01-09 19:41:36] 2026-01-10 00:40:50,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:41:36] 2026-01-10 00:40:50,543 | INFO     | collected zombie processes
[2026-01-09 19:41:36] 2026-01-10 00:40:50,543 | INFO     | will attempt to kill all subprocesses of pid=4723
[2026-01-09 19:41:36] 2026-01-10 00:40:50,632 | INFO     | process IDs to be killed: [4723] (in reverse order)
[2026-01-09 19:41:36] 2026-01-10 00:40:50,685 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:41:36] 2026-01-10 00:40:50,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:41:36] 2026-01-10 00:40:50,689 | INFO     | did not find any defunct processes belonging to 4723
[2026-01-09 19:41:36] 2026-01-10 00:40:50,692 | INFO     | did not find any defunct processes belonging to 4723
[2026-01-09 19:41:36] 2026-01-10 00:40:50,693 | INFO     | ready for new job
[2026-01-09 19:41:36] 2026-01-10 00:40:50,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:41:36] 2026-01-10 00:40:50,694 | INFO     | ***************************************
[2026-01-09 19:41:36] 2026-01-10 00:40:50,695 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:41:36] 2026-01-10 00:40:50,695 | INFO     | ***************************************
[2026-01-09 19:41:36] 2026-01-10 00:40:50,695 | INFO     | 
[2026-01-09 19:41:36] 2026-01-10 00:40:50,695 | INFO     | architecture information:
[2026-01-09 19:41:36] 2026-01-10 00:40:50,696 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:41:36] 2026-01-10 00:40:50,711 | INFO     | cat /etc/os-release:
[2026-01-09 19:41:36] NAME="CentOS Linux"
[2026-01-09 19:41:36] VERSION="7 (Core)"
[2026-01-09 19:41:36] ID="centos"
[2026-01-09 19:41:36] ID_LIKE="rhel fedora"
[2026-01-09 19:41:36] VERSION_ID="7"
[2026-01-09 19:41:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:41:36] ANSI_COLOR="0;31"
[2026-01-09 19:41:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:41:36] HOME_URL="https://www.centos.org/"
[2026-01-09 19:41:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:41:36] 
[2026-01-09 19:41:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:41:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:41:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:41:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:41:36] 
[2026-01-09 19:41:36] 2026-01-10 00:40:50,711 | INFO     | ***************************************
[2026-01-09 19:41:36] 2026-01-10 00:40:51,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:41:36] 2026-01-10 00:40:51,231 | INFO     | sufficient remaining disk space (29145169920 B)
[2026-01-09 19:41:36] 2026-01-10 00:40:51,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:41:36] 2026-01-10 00:40:51,232 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:41:36] 2026-01-10 00:40:51,232 | INFO     | update_server=False
[2026-01-09 19:41:36] 2026-01-10 00:40:51,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:41:36] 2026-01-10 00:40:51,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:41:36] 2026-01-10 00:40:51,289 | INFO     | all payload control threads have been joined
[2026-01-09 19:41:36] 2026-01-10 00:40:51,455 | INFO     | all data control threads have been joined
[2026-01-09 19:41:36] 2026-01-10 00:40:51,682 | INFO     | all job control threads have been joined
[2026-01-09 19:41:36] 2026-01-10 00:40:52,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:41:36] 2026-01-10 00:40:52,026 | INFO     | aborting loop
[2026-01-09 19:41:36] 2026-01-10 00:40:52,237 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,294 | INFO     | [payload] control thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,344 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,404 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,460 | INFO     | [data] control thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,561 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,687 | INFO     | [job] control thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:52,843 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:53,031 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:53,231 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:53,238 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:53,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:41:36] 2026-01-10 00:40:53,686 | INFO     | [job] validate thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:53,689 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:54,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:41:36] 2026-01-10 00:40:55,216 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:40:57,628 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:41:02,086 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:41:36] 2026-01-10 00:41:03,092 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:41:36] 2026-01-10 00:41:21,264 | INFO     | PID=30630 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 19:41:36] 2026-01-10 00:41:21,265 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:41:36] 2026-01-10 00:41:21,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:41:36] 2026-01-10 00:41:21,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:41:36] 2026-01-10 00:41:30,936 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:41:36] 2026-01-10 00:41:31,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635321317184)>', '<ExcThread(monitor, started 140634560108288)>']
[2026-01-09 19:41:36] 2026-01-10 00:41:31,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:41:36] 2026-01-10 00:41:31,316 | INFO     | [monitor] control thread has ended
[2026-01-09 19:41:36] 2026-01-10 00:41:36,182 | INFO     | all workflow threads have been joined
[2026-01-09 19:41:36] 2026-01-10 00:41:36,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:41:36] 2026-01-10 00:41:36,183 | INFO     | traces error code: 0
[2026-01-09 19:41:36] 2026-01-10 00:41:36,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:41:36] 2026-01-10 00:41:36,283 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:41:36] 2026-01-10 00:41:36,287 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:41:36] 2026-01-10 00:41:36,291 [wrapper] pilotpid: 30630
[2026-01-09 19:41:36] 2026-01-10 00:41:36,295 [wrapper] Pilot exit status: 0
[2026-01-09 19:41:36] 2026-01-10 00:41:36,310 [wrapper] pandaids: 6964539307
[2026-01-09 19:41:36] 2026-01-10 00:41:36,356 [wrapper] cleanup supervisor_pilot 18218 30631
[2026-01-09 19:41:36] 2026-01-10 00:41:36,360 [wrapper] Test setup, not cleaning
[2026-01-09 19:41:36] 2026-01-10 00:41:36,364 [wrapper] apfmon messages muted
[2026-01-09 19:41:36] 2026-01-10 00:41:36,368 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:41:36] 2026-01-10 00:41:36,372 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:41:36]  *** Error codes and diagnostics ***
[2026-01-09 19:41:36]     "exeErrorCode": 0,
[2026-01-09 19:41:36]     "exeErrorDiag": "",
[2026-01-09 19:41:36]     "pilotErrorCode": 0,
[2026-01-09 19:41:36]     "pilotErrorDiag": "",
[2026-01-09 19:41:36]  *** Listing of results directory ***
[2026-01-09 19:41:36] total 436556
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 10:59 queuedata.json
[2026-01-09 19:41:36] -rwx------ 1 boincer umatlas     36322 Jan  9 11:00 runpilot2-wrapper.sh
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas       100 Jan  9 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:41:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 19:04 run_atlas
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas       105 Jan  9 19:04 job.xml
[2026-01-09 19:41:36] -rw-r--r-- 2 boincer umatlas 392637332 Jan  9 19:04 EVNT.47962006._000038.pool.root.1
[2026-01-09 19:41:36] -rw-r--r-- 2 boincer umatlas    592619 Jan  9 19:04 input.tar.gz
[2026-01-09 19:41:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 19:04 start_atlas.sh
[2026-01-09 19:41:36] drwxrwx--x 2 boincer umatlas      4096 Jan  9 19:04 shared
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas         0 Jan  9 19:04 boinc_lockfile
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas      2890 Jan  9 19:04 pandaJob.out
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas        57 Jan  9 19:04 setup.sh.local
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas    989374 Jan  9 19:04 agis_schedconf.cvmfs.json
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas   1516240 Jan  9 19:04 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:41:36] drwx------ 5 boincer umatlas      4096 Jan  9 19:04 pilot3
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas       530 Jan  9 19:31 boinc_task_state.xml
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 19:36 init_data.xml
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas  46573613 Jan  9 19:40 HITS.47962010._001871.pool.root.1
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas      1054 Jan  9 19:40 memory_monitor_summary.json
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas   1596844 Jan  9 19:40 log.47962010._001871.job.log.tgz.1
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas        95 Jan  9 19:40 pilot_heartbeat.json
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas      8621 Jan  9 19:40 heartbeat.json
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 19:41 boinc_mmap_file
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas        27 Jan  9 19:41 wrapper_checkpoint.txt
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas      4818 Jan  9 19:41 pilotlog.txt
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas    355110 Jan  9 19:41 log.47962010._001871.job.log.1
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas       353 Jan  9 19:41 output.list
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas       620 Jan  9 19:41 runtime_log
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas   1976320 Jan  9 19:41 result.tar.gz
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 19:41 runtime_log.err
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas       659 Jan  9 19:41 A49LDmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNfmKDmwmPNun.diag
[2026-01-09 19:41:36] -rw-r--r-- 1 boincer umatlas     22066 Jan  9 19:41 stderr.txt
[2026-01-09 19:41:36] HITS file was successfully produced:
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas 46573613 Jan  9 19:40 shared/HITS.pool.root.1
[2026-01-09 19:41:36]  *** Contents of shared directory: ***
[2026-01-09 19:41:36] total 431448
[2026-01-09 19:41:36] -rw-r--r-- 2 boincer umatlas 392637332 Jan  9 19:04 ATLAS.root_0
[2026-01-09 19:41:36] -rw-r--r-- 2 boincer umatlas    592619 Jan  9 19:04 input.tar.gz
[2026-01-09 19:41:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 19:04 start_atlas.sh
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas  46573613 Jan  9 19:40 HITS.pool.root.1
[2026-01-09 19:41:36] -rw------- 1 boincer umatlas   1976320 Jan  9 19:41 result.tar.gz
19:41:38 (26951): run_atlas exited; CPU time 18740.443556
19:41:38 (26951): called boinc_finish(0)

</stderr_txt>
]]>

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