Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:40 (3904873): wrapper (7.7.26015): starting
11:02:40 (3904873): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 11:02:40] Arguments: --nthreads 3
[2026-01-10 11:02:40] Threads: 3
[2026-01-10 11:02:40] Checking for CVMFS
[2026-01-10 11:02:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 11:02:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 11:02:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 11:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 11:02:40] 2.9.2.0 2993219 3669 82592 154974 2 57 22166682 36864001 0 130560 0 2361110 99.989 133135 6093 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 11:02:40] CVMFS is ok
[2026-01-10 11:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 11:02:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 11:02:40] Further information can be found at the LHC@home message board.
[2026-01-10 11:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 11:02:40] Checking for apptainer binary...
[2026-01-10 11:02:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 11:02:40] Running /usr/bin/apptainer --version
[2026-01-10 11:02:40] apptainer version 1.4.1-1.1
[2026-01-10 11:02:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 11:02:40] magicA161
[2026-01-10 11:02:40] apptainer works
[2026-01-10 11:02:40] Set ATHENA_PROC_NUMBER=3
[2026-01-10 11:02:40] Set ATHENA_CORE_NUMBER=3
[2026-01-10 11:02:40] Starting ATLAS job with PandaID=6964539386
[2026-01-10 11:02:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:39:54]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:39:54] 2026-01-10 10:39:11,608 | INFO     | all data control threads have been joined
[2026-01-10 11:39:54] 2026-01-10 10:39:12,379 | INFO     | all payload control threads have been joined
[2026-01-10 11:39:54] 2026-01-10 10:39:12,455 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:12,455 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:12,456 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:12,552 | INFO     | all job control threads have been joined
[2026-01-10 11:39:54] 2026-01-10 10:39:12,614 | INFO     | [data] control thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:12,982 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,322 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,384 | INFO     | [payload] control thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,415 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,456 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,524 | INFO     | [job] validate thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,558 | INFO     | [job] control thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,571 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:39:54] 2026-01-10 10:39:13,655 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:13,943 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:17,581 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:21,898 | INFO     | job.realtimelogging is not enabled
[2026-01-10 11:39:54] 2026-01-10 10:39:22,903 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:39:54] 2026-01-10 10:39:42,258 | INFO     | PID=3908593 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 11:39:54] 2026-01-10 10:39:42,258 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:39:54] 2026-01-10 10:39:42,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:39:54] 2026-01-10 10:39:42,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:39:54] 2026-01-10 10:39:47,880 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:39:54] 2026-01-10 10:39:49,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620124706624)>', '<ExcThread(monitor, started 140619485792000)>']
[2026-01-10 11:39:54] 2026-01-10 10:39:49,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:39:54] 2026-01-10 10:39:49,292 | INFO     | [monitor] control thread has ended
[2026-01-10 11:39:54] 2026-01-10 10:39:54,048 | INFO     | all workflow threads have been joined
[2026-01-10 11:39:54] 2026-01-10 10:39:54,048 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:39:54] 2026-01-10 10:39:54,048 | INFO     | traces error code: 0
[2026-01-10 11:39:54] 2026-01-10 10:39:54,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:39:54] 2026-01-10 10:39:54,098 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:39:54] 2026-01-10 10:39:54,100 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:39:54] 2026-01-10 10:39:54,102 [wrapper] pilotpid: 3908593
[2026-01-10 11:39:54] 2026-01-10 10:39:54,104 [wrapper] Pilot exit status: 0
[2026-01-10 11:39:54] 2026-01-10 10:39:54,111 [wrapper] pandaids: 6964539386
[2026-01-10 11:39:54] 2026-01-10 10:39:54,126 [wrapper] cleanup supervisor_pilot 3921941 3908594
[2026-01-10 11:39:54] 2026-01-10 10:39:54,129 [wrapper] Test setup, not cleaning
[2026-01-10 11:39:54] 2026-01-10 10:39:54,131 [wrapper] apfmon messages muted
[2026-01-10 11:39:54] 2026-01-10 10:39:54,133 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:39:54] 2026-01-10 10:39:54,135 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:39:54]  *** Error codes and diagnostics ***
[2026-01-10 11:39:54]     "exeErrorCode": 0,
[2026-01-10 11:39:54]     "exeErrorDiag": "",
[2026-01-10 11:39:54]     "pilotErrorCode": 0,
[2026-01-10 11:39:54]     "pilotErrorDiag": "",
[2026-01-10 11:39:54]  *** Listing of results directory ***
[2026-01-10 11:39:54] total 435288
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-10 11:39:54] -rwx------ 1 boinc boinc     36322 Jan  9 17:00 runpilot2-wrapper.sh
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc      5112 Jan  9 17:00 queuedata.json
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc       100 Jan 10 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:39:54] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 11:02 run_atlas
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc       105 Jan 10 11:02 job.xml
[2026-01-10 11:39:54] -rw-r--r-- 2 boinc boinc 392805046 Jan 10 11:02 EVNT.47962006._000046.pool.root.1
[2026-01-10 11:39:54] drwxrwx--x 2 boinc boinc      4096 Jan 10 11:02 shared
[2026-01-10 11:39:54] -rw-r--r-- 2 boinc boinc    592613 Jan 10 11:02 input.tar.gz
[2026-01-10 11:39:54] -rw-r--r-- 2 boinc boinc     15847 Jan 10 11:02 start_atlas.sh
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc         0 Jan 10 11:02 boinc_setup_complete
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc      6448 Jan 10 11:02 init_data.xml
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc         0 Jan 10 11:02 boinc_lockfile
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc      2890 Jan 10 11:02 pandaJob.out
[2026-01-10 11:39:54] -rw------- 1 boinc boinc    989548 Jan 10 11:02 agis_schedconf.cvmfs.json
[2026-01-10 11:39:54] -rw------- 1 boinc boinc   1516240 Jan 10 11:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:39:54] drwx------ 5 boinc boinc      4096 Jan 10 11:02 pilot3
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc       528 Jan 10 11:37 boinc_task_state.xml
[2026-01-10 11:39:54] -rw------- 1 boinc boinc        95 Jan 10 11:38 pilot_heartbeat.json
[2026-01-10 11:39:54] -rw------- 1 boinc boinc  47078516 Jan 10 11:38 HITS.47962010._001950.pool.root.1
[2026-01-10 11:39:54] -rw------- 1 boinc boinc      1006 Jan 10 11:39 memory_monitor_summary.json
[2026-01-10 11:39:54] -rw------- 1 boinc boinc    620252 Jan 10 11:39 log.47962010._001950.job.log.tgz.1
[2026-01-10 11:39:54] -rw------- 1 boinc boinc      8511 Jan 10 11:39 heartbeat.json
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc        26 Jan 10 11:39 wrapper_checkpoint.txt
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc      8192 Jan 10 11:39 boinc_mmap_file
[2026-01-10 11:39:54] -rw------- 1 boinc boinc      4824 Jan 10 11:39 pilotlog.txt
[2026-01-10 11:39:54] -rw------- 1 boinc boinc    356186 Jan 10 11:39 log.47962010._001950.job.log.1
[2026-01-10 11:39:54] -rw------- 1 boinc boinc       353 Jan 10 11:39 output.list
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc       620 Jan 10 11:39 runtime_log
[2026-01-10 11:39:54] -rw------- 1 boinc boinc    993280 Jan 10 11:39 result.tar.gz
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc      8912 Jan 10 11:39 runtime_log.err
[2026-01-10 11:39:54] -rw------- 1 boinc boinc       660 Jan 10 11:39 mo3LDmJ5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYgmKDmXVTEYn.diag
[2026-01-10 11:39:54] -rw-r--r-- 1 boinc boinc      6834 Jan 10 11:39 stderr.txt
[2026-01-10 11:39:54] HITS file was successfully produced:
[2026-01-10 11:39:54] -rw------- 1 boinc boinc 47078516 Jan 10 11:38 shared/HITS.pool.root.1
[2026-01-10 11:39:54]  *** Contents of shared directory: ***
[2026-01-10 11:39:54] total 431152
[2026-01-10 11:39:54] -rw-r--r-- 2 boinc boinc 392805046 Jan 10 11:02 ATLAS.root_0
[2026-01-10 11:39:54] -rw-r--r-- 2 boinc boinc    592613 Jan 10 11:02 input.tar.gz
[2026-01-10 11:39:54] -rw-r--r-- 2 boinc boinc     15847 Jan 10 11:02 start_atlas.sh
[2026-01-10 11:39:54] -rw------- 1 boinc boinc  47078516 Jan 10 11:38 HITS.pool.root.1
[2026-01-10 11:39:54] -rw------- 1 boinc boinc    993280 Jan 10 11:39 result.tar.gz
11:39:55 (3904873): run_atlas exited; CPU time 5155.233776
11:39:55 (3904873): called boinc_finish(0)

</stderr_txt>
]]>

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