Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:54:09 (2705155): wrapper (7.7.26015): starting
05:54:09 (2705155): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 05:54:09] Arguments: --nthreads 4
[2026-01-10 05:54:09] Threads: 4
[2026-01-10 05:54:09] Checking for CVMFS
[2026-01-10 05:54:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:54:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:54:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:54:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:54:09] 2.13.3.0 3218523 2003 55304 154978 2 251 4667759 6144000 5394 130560 0 7883106 99.996 142570 1443 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-10 05:54:09] CVMFS is ok
[2026-01-10 05:54:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:54:09] Checking for apptainer binary...
[2026-01-10 05:54:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:54:09] Running /usr/bin/apptainer --version
[2026-01-10 05:54:09] apptainer version 1.4.5
[2026-01-10 05:54:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:54:09] Starfish-Cruncher
[2026-01-10 05:54:09] apptainer works
[2026-01-10 05:54:09] Set ATHENA_PROC_NUMBER=4
[2026-01-10 05:54:09] Set ATHENA_CORE_NUMBER=4
[2026-01-10 05:54:09] Starting ATLAS job with PandaID=6964539306
[2026-01-10 05:54:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:49:40]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:49:40]  lfn=log.47962010._001870.job.log.tgz.1
[2026-01-10 06:49:40]  mtime=0
[2026-01-10 06:49:40]  protocol_id=None
[2026-01-10 06:49:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 06:49:40]  replicas=None
[2026-01-10 06:49:40]  scope=mc16_13TeV
[2026-01-10 06:49:40]  status=None
[2026-01-10 06:49:40]  status_code=0
[2026-01-10 06:49:40]  storage_token=
[2026-01-10 06:49:40]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6964539306/log.47962010._001870.job.log.tgz.1
[2026-01-10 06:49:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/23/c6/log.47962010._001870.job.log.tgz.1
[2026-01-10 06:49:40]  workdir=None
[2026-01-10 06:49:40] ]
[2026-01-10 06:49:40] 2026-01-10 12:49:03,451 | INFO     | transferring file log.47962010._001870.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6964539306/log.47962010._001870.job.log.tgz.1 to /var/lib/boinc
[2026-01-10 06:49:40] 2026-01-10 12:49:03,451 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6964539306/log.47962010._001870.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.479620
[2026-01-10 06:49:40] 2026-01-10 12:49:03,467 | INFO     | adding to output.list: log.47962010._001870.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/23/c6/log.47962010._001870.job.log.tgz.
[2026-01-10 06:49:40] 2026-01-10 12:49:03,468 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 06:49:40] 2026-01-10 12:49:03,468 | INFO     | summary of transferred files:
[2026-01-10 06:49:40] 2026-01-10 12:49:03,468 | INFO     |  -- lfn=log.47962010._001870.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 06:49:40] 2026-01-10 12:49:03,468 | INFO     | stage-out finished correctly
[2026-01-10 06:49:40] 2026-01-10 12:49:03,536 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 06:49:40] 2026-01-10 12:49:04,959 | INFO     | job 6964539306 has state=finished
[2026-01-10 06:49:40] 2026-01-10 12:49:04,959 | INFO     | preparing for final server update for job 6964539306 in state='finished'
[2026-01-10 06:49:40] 2026-01-10 12:49:04,959 | INFO     | this job has now completed (state=finished)
[2026-01-10 06:49:40] 2026-01-10 12:49:04,960 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 06:49:40] 2026-01-10 12:49:04,960 | INFO     | log transfer has been attempted: DONE
[2026-01-10 06:49:40] 2026-01-10 12:49:04,960 | INFO     | job 6964539306 has finished - writing final server update
[2026-01-10 06:49:40] 2026-01-10 12:49:04,960 | INFO     | total number of processed events: 50 (read)
[2026-01-10 06:49:40] 2026-01-10 12:49:04,961 | INFO     | executing command: lscpu
[2026-01-10 06:49:40] 2026-01-10 12:49:04,989 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 06:49:40] 2026-01-10 12:49:05,080 | INFO     | time since job start (3287s) is within the limit (349056.0s)
[2026-01-10 06:49:40] 2026-01-10 12:49:07,085 | INFO     | time since job start (3289s) is within the limit (349056.0s)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,089 | WARNING  | process 2715878 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 06:49:40] 2026-01-10 12:49:08,089 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6964539306/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,260 | INFO     | number of running child processes to parent process 2715878: 1
[2026-01-10 06:49:40] 2026-01-10 12:49:08,260 | INFO     | maximum number of monitored processes: 9
[2026-01-10 06:49:40] 2026-01-10 12:49:08,809 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 06:49:40] 2026-01-10 12:49:08,812 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3559.393124999999
[2026-01-10 06:49:40] 2026-01-10 12:49:08,816 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6964539306/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,817 | INFO     | extracted standard info from prmon json
[2026-01-10 06:49:40] 2026-01-10 12:49:08,817 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:49:40] 2026-01-10 12:49:08,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:49:40] 2026-01-10 12:49:08,818 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:49:40] 2026-01-10 12:49:08,818 | INFO     | sum of square deviations: 32179208.0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | sum of deviations: 3250717328.0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | mean x: 1768047788.0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | mean y: 2066325.914893617
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | intersect: -178604678165.23822
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | chi2: 0.3652191222123999
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | current memory leak: 101.02 B/s (using 47 data points, chi2=0.37)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | could have reported an average CPU frequency of 3693 MHz (5 samples)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | ..............................
[2026-01-10 06:49:40] 2026-01-10 12:49:08,819 | INFO     | . Timing measurements:
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . get job = 0 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . initial setup = 2 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . payload setup = 4 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . stage-in = 0 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . payload execution = 3263 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . stage-out = 0 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | . log creation = 0 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,820 | INFO     | ..............................
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | 
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | job summary report
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | --------------------------------------------------
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | PanDA job id: 6964539306
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | task id: 47962010
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | errors: (none)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,888 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | pilot state: finished 
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | transexitcode: 0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | exeerrorcode: 0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | exeerrordiag: 
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | exitcode: 0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | exitmsg: OK
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | cpuconsumptiontime: 10895 s
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | nevents: 50
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | neventsw: 0
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | pid: 2715878
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | pgrp: 2715878
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | corecount: 4
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | event service: False
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | sizes: {0: 2284576, 3: 2284838, 11: 2284866, 3271: 2320062, 3277: 2320284}
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | --------------------------------------------------
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | 
[2026-01-10 06:49:40] 2026-01-10 12:49:08,889 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-10 06:49:40] 2026-01-10 12:49:08,904 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,906 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,906 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:49:40] 2026-01-10 12:49:08,906 | INFO     | job 6964539306 has completed (purged errors)
[2026-01-10 06:49:40] 2026-01-10 12:49:08,906 | INFO     | overall cleanup function is called
[2026-01-10 06:49:40] 2026-01-10 12:49:09,917 | INFO     | --- collectZombieJob: --- 10, [2715878]
[2026-01-10 06:49:40] 2026-01-10 12:49:09,917 | INFO     | zombie collector waiting for pid 2715878
[2026-01-10 06:49:40] 2026-01-10 12:49:09,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:49:40] 2026-01-10 12:49:09,917 | INFO     | collected zombie processes
[2026-01-10 06:49:40] 2026-01-10 12:49:09,918 | INFO     | will attempt to kill all subprocesses of pid=2715878
[2026-01-10 06:49:40] 2026-01-10 12:49:10,093 | INFO     | process IDs to be killed: [2715878] (in reverse order)
[2026-01-10 06:49:40] 2026-01-10 12:49:10,156 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:49:40] 2026-01-10 12:49:10,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:49:40] 2026-01-10 12:49:10,161 | INFO     | did not find any defunct processes belonging to 2715878
[2026-01-10 06:49:40] 2026-01-10 12:49:10,165 | INFO     | did not find any defunct processes belonging to 2715878
[2026-01-10 06:49:40] 2026-01-10 12:49:10,165 | INFO     | ready for new job
[2026-01-10 06:49:40] 2026-01-10 12:49:10,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:49:40] 2026-01-10 12:49:10,166 | INFO     | ***************************************
[2026-01-10 06:49:40] 2026-01-10 12:49:10,166 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:49:40] 2026-01-10 12:49:10,166 | INFO     | ***************************************
[2026-01-10 06:49:40] 2026-01-10 12:49:10,166 | INFO     | 
[2026-01-10 06:49:40] 2026-01-10 12:49:10,168 | INFO     | architecture information:
[2026-01-10 06:49:40] 2026-01-10 12:49:10,168 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:49:40] 2026-01-10 12:49:10,180 | INFO     | cat /etc/os-release:
[2026-01-10 06:49:40] NAME="CentOS Linux"
[2026-01-10 06:49:40] VERSION="7 (Core)"
[2026-01-10 06:49:40] ID="centos"
[2026-01-10 06:49:40] ID_LIKE="rhel fedora"
[2026-01-10 06:49:40] VERSION_ID="7"
[2026-01-10 06:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:49:40] ANSI_COLOR="0;31"
[2026-01-10 06:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:49:40] HOME_URL="https://www.centos.org/"
[2026-01-10 06:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:49:40] 
[2026-01-10 06:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:49:40] 
[2026-01-10 06:49:40] 2026-01-10 12:49:10,180 | INFO     | ***************************************
[2026-01-10 06:49:40] 2026-01-10 12:49:10,683 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-10 06:49:40] 2026-01-10 12:49:10,696 | INFO     | sufficient remaining disk space (1815115464704 B)
[2026-01-10 06:49:40] 2026-01-10 12:49:10,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:49:40] 2026-01-10 12:49:10,696 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:49:40] 2026-01-10 12:49:10,696 | INFO     | update_server=False
[2026-01-10 06:49:40] 2026-01-10 12:49:10,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:49:40] 2026-01-10 12:49:10,697 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:49:40] 2026-01-10 12:49:10,763 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 06:49:40] 2026-01-10 12:49:10,764 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 06:49:40] 2026-01-10 12:49:10,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:49:40] 2026-01-10 12:49:10,764 | INFO     | will abort loop
[2026-01-10 06:49:40] 2026-01-10 12:49:11,042 | INFO     | all payload control threads have been joined
[2026-01-10 06:49:40] 2026-01-10 12:49:11,165 | INFO     | all data control threads have been joined
[2026-01-10 06:49:40] 2026-01-10 12:49:11,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:49:40] 2026-01-10 12:49:11,699 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:11,702 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:11,771 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,024 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,046 | INFO     | [payload] control thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,170 | INFO     | [data] control thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,243 | INFO     | all job control threads have been joined
[2026-01-10 06:49:40] 2026-01-10 12:49:12,319 | INFO     | [job] validate thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,404 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,406 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,611 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:12,887 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:13,123 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:13,248 | INFO     | [job] control thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:13,553 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:14,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:49:40] 2026-01-10 12:49:18,121 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:21,571 | INFO     | job.realtimelogging is not enabled
[2026-01-10 06:49:40] 2026-01-10 12:49:22,576 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:49:40] 2026-01-10 12:49:22,909 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:49:40] 2026-01-10 12:49:23,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133834544236352)>', '<ExcThread(monitor, started 133833924011776)>']
[2026-01-10 06:49:40] 2026-01-10 12:49:28,977 | INFO     | all workflow threads have been joined
[2026-01-10 06:49:40] 2026-01-10 12:49:28,977 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:49:40] 2026-01-10 12:49:28,977 | INFO     | traces error code: 0
[2026-01-10 06:49:40] 2026-01-10 12:49:28,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:49:40] 2026-01-10 12:49:39,159 | INFO     | 3293s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 06:49:40] 2026-01-10 12:49:40,358 | INFO     | PID=2709055 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 06:49:40] 2026-01-10 12:49:40,359 | INFO     | .. there are 8 such processes running
[2026-01-10 06:49:40] 2026-01-10 12:49:40,359 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:49:40] 2026-01-10 12:49:40,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:49:40] 2026-01-10 12:49:40,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:49:40] 2026-01-10 12:49:40,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:49:40] 2026-01-10 12:49:40,359 | INFO     | [monitor] control thread has ended
[2026-01-10 06:49:40] 2026-01-10 12:49:40,431 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:49:40] 2026-01-10 12:49:40,433 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:49:40] 2026-01-10 12:49:40,435 [wrapper] pilotpid: 2709055
[2026-01-10 06:49:40] 2026-01-10 12:49:40,437 [wrapper] Pilot exit status: 0
[2026-01-10 06:49:40] 2026-01-10 12:49:40,445 [wrapper] pandaids: 6964539306
[2026-01-10 06:49:40] 2026-01-10 12:49:40,481 [wrapper] cleanup supervisor_pilot 2824244 2709056
[2026-01-10 06:49:40] 2026-01-10 12:49:40,483 [wrapper] Test setup, not cleaning
[2026-01-10 06:49:40] 2026-01-10 12:49:40,485 [wrapper] apfmon messages muted
[2026-01-10 06:49:40] 2026-01-10 12:49:40,487 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:49:40] 2026-01-10 12:49:40,490 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:49:40]  *** Error codes and diagnostics ***
[2026-01-10 06:49:40]     "exeErrorCode": 0,
[2026-01-10 06:49:40]     "exeErrorDiag": "",
[2026-01-10 06:49:40]     "pilotErrorCode": 0,
[2026-01-10 06:49:40]     "pilotErrorDiag": "",
[2026-01-10 06:49:40]  *** Listing of results directory ***
[2026-01-10 06:49:40] total 431720
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc    579449 Jan  9 09:55 pilot3.tar.gz
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc      5112 Jan  9 09:59 queuedata.json
[2026-01-10 06:49:40] -rwx------ 1 boinc boinc     36322 Jan  9 10:00 runpilot2-wrapper.sh
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc       100 Jan 10 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:49:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 05:54 run_atlas
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc       105 Jan 10 05:54 job.xml
[2026-01-10 06:49:40] -rw-r--r-- 2 boinc boinc 392637332 Jan 10 05:54 EVNT.47962006._000038.pool.root.1
[2026-01-10 06:49:40] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:54 start_atlas.sh
[2026-01-10 06:49:40] drwxrwx--x 2 boinc boinc      4096 Jan 10 05:54 shared
[2026-01-10 06:49:40] -rw-r--r-- 2 boinc boinc    592616 Jan 10 05:54 input.tar.gz
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc      9662 Jan 10 05:54 init_data.xml
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:54 boinc_lockfile
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc      2890 Jan 10 05:54 pandaJob.out
[2026-01-10 06:49:40] -rw------- 1 boinc boinc    989564 Jan 10 05:54 agis_schedconf.cvmfs.json
[2026-01-10 06:49:40] -rw------- 1 boinc boinc   1516240 Jan 10 05:54 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:49:40] drwx------ 5 boinc boinc      4096 Jan 10 05:54 pilot3
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc       530 Jan 10 06:44 boinc_task_state.xml
[2026-01-10 06:49:40] -rw------- 1 boinc boinc  42996720 Jan 10 06:48 HITS.47962010._001870.pool.root.1
[2026-01-10 06:49:40] -rw------- 1 boinc boinc      1019 Jan 10 06:48 memory_monitor_summary.json
[2026-01-10 06:49:40] -rw------- 1 boinc boinc    750037 Jan 10 06:49 log.47962010._001870.job.log.tgz.1
[2026-01-10 06:49:40] -rw------- 1 boinc boinc        95 Jan 10 06:49 pilot_heartbeat.json
[2026-01-10 06:49:40] -rw------- 1 boinc boinc      8519 Jan 10 06:49 heartbeat.json
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc        27 Jan 10 06:49 wrapper_checkpoint.txt
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc      8192 Jan 10 06:49 boinc_mmap_file
[2026-01-10 06:49:40] -rw------- 1 boinc boinc       937 Jan 10 06:49 pilotlog.txt
[2026-01-10 06:49:40] -rw------- 1 boinc boinc    514455 Jan 10 06:49 log.47962010._001870.job.log.1
[2026-01-10 06:49:40] -rw------- 1 boinc boinc       353 Jan 10 06:49 output.list
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc       620 Jan 10 06:49 runtime_log
[2026-01-10 06:49:40] -rw------- 1 boinc boinc   1280000 Jan 10 06:49 result.tar.gz
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc      8933 Jan 10 06:49 runtime_log.err
[2026-01-10 06:49:40] -rw------- 1 boinc boinc       653 Jan 10 06:49 ru8LDmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMfmKDmev1hnn.diag
[2026-01-10 06:49:40] -rw-r--r-- 1 boinc boinc     21407 Jan 10 06:49 stderr.txt
[2026-01-10 06:49:40] HITS file was successfully produced:
[2026-01-10 06:49:40] -rw------- 1 boinc boinc 42996720 Jan 10 06:48 shared/HITS.pool.root.1
[2026-01-10 06:49:40]  *** Contents of shared directory: ***
[2026-01-10 06:49:40] total 427284
[2026-01-10 06:49:40] -rw-r--r-- 2 boinc boinc 392637332 Jan 10 05:54 ATLAS.root_0
[2026-01-10 06:49:40] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:54 start_atlas.sh
[2026-01-10 06:49:40] -rw-r--r-- 2 boinc boinc    592616 Jan 10 05:54 input.tar.gz
[2026-01-10 06:49:40] -rw------- 1 boinc boinc  42996720 Jan 10 06:48 HITS.pool.root.1
[2026-01-10 06:49:40] -rw------- 1 boinc boinc   1280000 Jan 10 06:49 result.tar.gz
06:49:42 (2705155): run_atlas exited; CPU time 10898.073052
06:49:42 (2705155): called boinc_finish(0)

</stderr_txt>
]]>

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