Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
15:27:55 (632252): wrapper (7.7.26015): starting
15:27:55 (632252): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 15:27:55] Arguments: --nthreads 12
[2026-01-10 15:27:55] Threads: 12
[2026-01-10 15:27:55] Checking for CVMFS
[2026-01-10 15:27:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 15:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 15:27:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 15:27:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 15:27:55] 2.12.7.0 5106 622 65504 154991 2 101 3240418 4194304 1955 130560 10 1377370 99.974 24589 221 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-01-10 15:27:55] CVMFS is ok
[2026-01-10 15:27:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 15:27:55] Checking for apptainer binary...
[2026-01-10 15:27:55] apptainer is not installed, using version from CVMFS
[2026-01-10 15:27:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 15:27:56] Trebeth
[2026-01-10 15:27:56] apptainer works
[2026-01-10 15:27:56] Set ATHENA_PROC_NUMBER=12
[2026-01-10 15:27:56] Set ATHENA_CORE_NUMBER=12
[2026-01-10 15:27:56] Starting ATLAS job with PandaID=6964556533
[2026-01-10 15:27:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:00:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:00:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-10 17:00:36]  is_altstaged=None
[2026-01-10 17:00:36]  is_tar=False
[2026-01-10 17:00:36]  lfn=log.47898826._040127.job.log.tgz.1
[2026-01-10 17:00:36]  mtime=0
[2026-01-10 17:00:36]  protocol_id=None
[2026-01-10 17:00:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 17:00:36]  replicas=None
[2026-01-10 17:00:36]  scope=mc23_13p6TeV
[2026-01-10 17:00:36]  status=None
[2026-01-10 17:00:36]  status_code=0
[2026-01-10 17:00:36]  storage_token=
[2026-01-10 17:00:36]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6964556533/log.47898826._040127.job.log.tgz.1
[2026-01-10 17:00:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/bc/log.47898826._040127.job.log.tgz.1
[2026-01-10 17:00:36]  workdir=None
[2026-01-10 17:00:36] ]
[2026-01-10 17:00:36] 2026-01-10 21:59:39,300 | INFO     | transferring file log.47898826._040127.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6964556533/log.47898826._040127.job.log.tgz.1 to /var/lib/boinc
[2026-01-10 17:00:36] 2026-01-10 21:59:39,301 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6964556533/log.47898826._040127.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.478988
[2026-01-10 17:00:36] 2026-01-10 21:59:39,314 | INFO     | adding to output.list: log.47898826._040127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/bc/log.47898826._040127.job.log.tg
[2026-01-10 17:00:36] 2026-01-10 21:59:39,315 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 17:00:36] 2026-01-10 21:59:39,315 | INFO     | summary of transferred files:
[2026-01-10 17:00:36] 2026-01-10 21:59:39,315 | INFO     |  -- lfn=log.47898826._040127.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 17:00:36] 2026-01-10 21:59:39,315 | INFO     | stage-out finished correctly
[2026-01-10 17:00:36] 2026-01-10 21:59:39,403 | INFO     | monitor loop #409: job 0:6964556533 is in state 'finished'
[2026-01-10 17:00:36] 2026-01-10 21:59:39,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:00:36] 2026-01-10 21:59:39,610 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 17:00:36] 2026-01-10 21:59:39,697 | INFO     | job 6964556533 has state=finished
[2026-01-10 17:00:36] 2026-01-10 21:59:39,697 | INFO     | preparing for final server update for job 6964556533 in state='finished'
[2026-01-10 17:00:36] 2026-01-10 21:59:39,697 | INFO     | this job has now completed (state=finished)
[2026-01-10 17:00:36] 2026-01-10 21:59:39,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 17:00:36] 2026-01-10 21:59:39,698 | INFO     | log transfer has been attempted: DONE
[2026-01-10 17:00:36] 2026-01-10 21:59:39,698 | INFO     | job 6964556533 has finished - writing final server update
[2026-01-10 17:00:36] 2026-01-10 21:59:39,698 | INFO     | total number of processed events: 400 (read)
[2026-01-10 17:00:36] 2026-01-10 21:59:39,699 | INFO     | executing command: lscpu
[2026-01-10 17:00:36] 2026-01-10 21:59:39,752 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 17:00:36] 2026-01-10 21:59:40,463 | INFO     | time since job start (5478s) is within the limit (349056.0s)
[2026-01-10 17:00:36] 2026-01-10 21:59:41,906 | INFO     | monitor loop #410: job 0:6964556533 is in state 'finished'
[2026-01-10 17:00:36] 2026-01-10 21:59:41,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,467 | INFO     | time since job start (5480s) is within the limit (349056.0s)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,538 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 17:00:36] 2026-01-10 21:59:42,546 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3019.524089285714
[2026-01-10 17:00:36] 2026-01-10 21:59:42,555 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6964556533/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,556 | INFO     | extracted standard info from prmon json
[2026-01-10 17:00:36] 2026-01-10 21:59:42,556 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:00:36] 2026-01-10 21:59:42,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:00:36] 2026-01-10 21:59:42,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 17:00:36] 2026-01-10 21:59:42,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 17:00:36] 2026-01-10 21:59:42,559 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:00:36] 2026-01-10 21:59:42,559 | INFO     | sum of square deviations: 177275882.0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,559 | INFO     | sum of deviations: -15220621180.0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,560 | INFO     | mean x: 1768079730.0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,560 | INFO     | mean y: 2853471.987951807
[2026-01-10 17:00:36] 2026-01-10 21:59:42,560 | INFO     | intersect: 151807326154.6661
[2026-01-10 17:00:36] 2026-01-10 21:59:42,560 | INFO     | chi2: 0.14932690458582779
[2026-01-10 17:00:36] 2026-01-10 21:59:42,560 | INFO     | current memory leak: -85.86 B/s (using 83 data points, chi2=0.15)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,560 | INFO     | could have reported an average CPU frequency of 3020 MHz (7 samples)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | ..............................
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . Timing measurements:
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . get job = 0 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . initial setup = 20 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . payload setup = 4 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . stage-in = 0 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . payload execution = 5452 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . stage-out = 0 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | . log creation = 0 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,561 | INFO     | ..............................
[2026-01-10 17:00:36] 2026-01-10 21:59:42,649 | INFO     | 
[2026-01-10 17:00:36] 2026-01-10 21:59:42,649 | INFO     | job summary report
[2026-01-10 17:00:36] 2026-01-10 21:59:42,649 | INFO     | --------------------------------------------------
[2026-01-10 17:00:36] 2026-01-10 21:59:42,649 | INFO     | PanDA job id: 6964556533
[2026-01-10 17:00:36] 2026-01-10 21:59:42,649 | INFO     | task id: 47898826
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | errors: (none)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | pilot state: finished 
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | transexitcode: 0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | exeerrorcode: 0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | exeerrordiag: 
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | exitcode: 0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | exitmsg: OK
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | cpuconsumptiontime: 59706 s
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | nevents: 400
[2026-01-10 17:00:36] 2026-01-10 21:59:42,650 | INFO     | neventsw: 0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | pid: 643265
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | pgrp: 643265
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | corecount: 12
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | event service: False
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | sizes: {0: 2283698, 1: 2283897, 4: 2284159, 11: 2284187, 5460: 2310804, 5461: 2310803, 5463: 2320055, 5466: 2320193}
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | --------------------------------------------------
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | 
[2026-01-10 17:00:36] 2026-01-10 21:59:42,651 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-10 17:00:36] 2026-01-10 21:59:42,663 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:00:36] 2026-01-10 21:59:42,666 | INFO     | job 6964556533 has completed (purged errors)
[2026-01-10 17:00:36] 2026-01-10 21:59:42,666 | INFO     | overall cleanup function is called
[2026-01-10 17:00:36] 2026-01-10 21:59:43,670 | INFO     | --- collectZombieJob: --- 10, [643265]
[2026-01-10 17:00:36] 2026-01-10 21:59:43,671 | INFO     | zombie collector waiting for pid 643265
[2026-01-10 17:00:36] 2026-01-10 21:59:43,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:00:36] 2026-01-10 21:59:43,671 | INFO     | collected zombie processes
[2026-01-10 17:00:36] 2026-01-10 21:59:43,671 | INFO     | will attempt to kill all subprocesses of pid=643265
[2026-01-10 17:00:36] 2026-01-10 21:59:43,845 | INFO     | process IDs to be killed: [643265] (in reverse order)
[2026-01-10 17:00:36] 2026-01-10 21:59:43,897 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:00:36] 2026-01-10 21:59:43,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:00:36] 2026-01-10 21:59:43,901 | INFO     | did not find any defunct processes belonging to 643265
[2026-01-10 17:00:36] 2026-01-10 21:59:43,904 | INFO     | did not find any defunct processes belonging to 643265
[2026-01-10 17:00:36] 2026-01-10 21:59:43,904 | INFO     | ready for new job
[2026-01-10 17:00:36] 2026-01-10 21:59:43,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:00:36] 2026-01-10 21:59:43,905 | INFO     | ***************************************
[2026-01-10 17:00:36] 2026-01-10 21:59:43,905 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:00:36] 2026-01-10 21:59:43,905 | INFO     | ***************************************
[2026-01-10 17:00:36] 2026-01-10 21:59:43,906 | INFO     | 
[2026-01-10 17:00:36] 2026-01-10 21:59:43,926 | INFO     | architecture information:
[2026-01-10 17:00:36] 2026-01-10 21:59:43,927 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:00:36] 2026-01-10 21:59:43,937 | INFO     | cat /etc/os-release:
[2026-01-10 17:00:36] NAME="CentOS Linux"
[2026-01-10 17:00:36] VERSION="7 (Core)"
[2026-01-10 17:00:36] ID="centos"
[2026-01-10 17:00:36] ID_LIKE="rhel fedora"
[2026-01-10 17:00:36] VERSION_ID="7"
[2026-01-10 17:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:00:36] ANSI_COLOR="0;31"
[2026-01-10 17:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:00:36] HOME_URL="https://www.centos.org/"
[2026-01-10 17:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:00:36] 
[2026-01-10 17:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:00:36] 
[2026-01-10 17:00:36] 2026-01-10 21:59:43,937 | INFO     | ***************************************
[2026-01-10 17:00:36] 2026-01-10 21:59:44,440 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | INFO     | sufficient remaining disk space (389884674048 B)
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | INFO     | update_server=False
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 17:00:36] 2026-01-10 21:59:44,453 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:00:36] 2026-01-10 21:59:44,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:00:36] 2026-01-10 21:59:44,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:00:36] 2026-01-10 21:59:44,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:00:36] 2026-01-10 21:59:44,602 | INFO     | all payload control threads have been joined
[2026-01-10 17:00:36] 2026-01-10 21:59:44,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:00:36] 2026-01-10 21:59:45,306 | INFO     | all data control threads have been joined
[2026-01-10 17:00:36] 2026-01-10 21:59:45,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:00:36] 2026-01-10 21:59:45,415 | INFO     | aborting loop
[2026-01-10 17:00:36] 2026-01-10 21:59:45,458 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,459 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,481 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,586 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,608 | INFO     | [payload] control thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,654 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,666 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:45,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:00:36] 2026-01-10 21:59:45,719 | INFO     | all job control threads have been joined
[2026-01-10 17:00:36] 2026-01-10 21:59:45,738 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,190 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,310 | INFO     | [data] control thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,418 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,652 | INFO     | [job] validate thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,722 | INFO     | [job] control thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,806 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:46,914 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:00:36] 2026-01-10 21:59:49,706 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:00:36] 2026-01-10 22:00:31,093 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:00:36] 2026-01-10 22:00:31,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396457228096)>', '<ExcThread(monitor, started 140395887449856)>']
[2026-01-10 17:00:36] 2026-01-10 22:00:31,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:00:36] 2026-01-10 22:00:31,643 | INFO     | [monitor] control thread has ended
[2026-01-10 17:00:36] 2026-01-10 22:00:36,578 | INFO     | all workflow threads have been joined
[2026-01-10 17:00:36] 2026-01-10 22:00:36,579 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:00:36] 2026-01-10 22:00:36,579 | INFO     | traces error code: 0
[2026-01-10 17:00:36] 2026-01-10 22:00:36,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:00:36] 2026-01-10 22:00:36,690 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:00:36] 2026-01-10 22:00:36,692 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:00:36] 2026-01-10 22:00:36,694 [wrapper] pilotpid: 636276
[2026-01-10 17:00:36] 2026-01-10 22:00:36,695 [wrapper] Pilot exit status: 0
[2026-01-10 17:00:36] 2026-01-10 22:00:36,702 [wrapper] pandaids: 6964556533
[2026-01-10 17:00:36] 2026-01-10 22:00:36,741 [wrapper] cleanup supervisor_pilot  707198 636277
[2026-01-10 17:00:36] 2026-01-10 22:00:36,743 [wrapper] Test setup, not cleaning
[2026-01-10 17:00:36] 2026-01-10 22:00:36,744 [wrapper] apfmon messages muted
[2026-01-10 17:00:36] 2026-01-10 22:00:36,746 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:00:36] 2026-01-10 22:00:36,747 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:00:36]  *** Error codes and diagnostics ***
[2026-01-10 17:00:36]     "exeErrorCode": 0,
[2026-01-10 17:00:36]     "exeErrorDiag": "",
[2026-01-10 17:00:36]     "pilotErrorCode": 0,
[2026-01-10 17:00:36]     "pilotErrorDiag": "",
[2026-01-10 17:00:36]  *** Listing of results directory ***
[2026-01-10 17:00:36] total 441672
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc      5112 Jan  9 11:24 queuedata.json
[2026-01-10 17:00:36] -rwx------ 1 boinc boinc     36322 Jan  9 11:24 runpilot2-wrapper.sh
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc    579449 Jan  9 11:24 pilot3.tar.gz
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc       100 Jan 10 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:00:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 15:27 run_atlas
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc       105 Jan 10 15:27 job.xml
[2026-01-10 17:00:36] -rw-r--r-- 2 boinc boinc     15847 Jan 10 15:27 start_atlas.sh
[2026-01-10 17:00:36] drwxrwx--x 2 boinc boinc      4096 Jan 10 15:27 shared
[2026-01-10 17:00:36] -rw-r--r-- 2 boinc boinc    592399 Jan 10 15:27 input.tar.gz
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc      7579 Jan 10 15:27 init_data.xml
[2026-01-10 17:00:36] -rw-r--r-- 2 boinc boinc 224538443 Jan 10 15:27 EVNT.47898824._001383.pool.root.1
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc         0 Jan 10 15:27 boinc_lockfile
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc      2514 Jan 10 15:27 pandaJob.out
[2026-01-10 17:00:36] -rw------- 1 boinc boinc        50 Jan 10 15:27 setup.sh.local
[2026-01-10 17:00:36] -rw------- 1 boinc boinc    989548 Jan 10 15:28 agis_schedconf.cvmfs.json
[2026-01-10 17:00:36] -rw------- 1 boinc boinc   1516240 Jan 10 15:28 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:00:36] drwx------ 5 boinc boinc      4096 Jan 10 15:28 pilot3
[2026-01-10 17:00:36] -rw------- 1 boinc boinc 221436624 Jan 10 16:59 HITS.47898826._040127.pool.root.1
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc       529 Jan 10 16:59 boinc_task_state.xml
[2026-01-10 17:00:36] -rw------- 1 boinc boinc        95 Jan 10 16:59 pilot_heartbeat.json
[2026-01-10 17:00:36] -rw------- 1 boinc boinc      1020 Jan 10 16:59 memory_monitor_summary.json
[2026-01-10 17:00:36] -rw------- 1 boinc boinc    382086 Jan 10 16:59 log.47898826._040127.job.log.tgz.1
[2026-01-10 17:00:36] -rw------- 1 boinc boinc      7776 Jan 10 16:59 heartbeat.json
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc        27 Jan 10 17:00 wrapper_checkpoint.txt
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:00 boinc_mmap_file
[2026-01-10 17:00:36] -rw------- 1 boinc boinc      4560 Jan 10 17:00 pilotlog.txt
[2026-01-10 17:00:36] -rw------- 1 boinc boinc    809157 Jan 10 17:00 log.47898826._040127.job.log.1
[2026-01-10 17:00:36] -rw------- 1 boinc boinc       357 Jan 10 17:00 output.list
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:00 runtime_log
[2026-01-10 17:00:36] -rw------- 1 boinc boinc   1208320 Jan 10 17:00 result.tar.gz
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc      9404 Jan 10 17:00 runtime_log.err
[2026-01-10 17:00:36] -rw------- 1 boinc boinc       651 Jan 10 17:00 O6mMDmFTUy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvgmKDmY7CKtm.diag
[2026-01-10 17:00:36] -rw-r--r-- 1 boinc boinc     21163 Jan 10 17:00 stderr.txt
[2026-01-10 17:00:36] HITS file was successfully produced:
[2026-01-10 17:00:36] -rw------- 1 boinc boinc 221436624 Jan 10 16:59 shared/HITS.pool.root.1
[2026-01-10 17:00:36]  *** Contents of shared directory: ***
[2026-01-10 17:00:36] total 437308
[2026-01-10 17:00:36] -rw-r--r-- 2 boinc boinc     15847 Jan 10 15:27 start_atlas.sh
[2026-01-10 17:00:36] -rw-r--r-- 2 boinc boinc    592399 Jan 10 15:27 input.tar.gz
[2026-01-10 17:00:36] -rw-r--r-- 2 boinc boinc 224538443 Jan 10 15:27 ATLAS.root_0
[2026-01-10 17:00:36] -rw------- 1 boinc boinc 221436624 Jan 10 16:59 HITS.pool.root.1
[2026-01-10 17:00:36] -rw------- 1 boinc boinc   1208320 Jan 10 17:00 result.tar.gz
17:00:38 (632252): run_atlas exited; CPU time 59831.215464
17:00:38 (632252): called boinc_finish(0)

</stderr_txt>
]]>

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