Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:18:05 (14414): wrapper (7.7.26015): starting
02:18:05 (14414): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 02:18:05] Arguments: --nthreads 8
[2026-01-11 02:18:05] Threads: 8
[2026-01-11 02:18:05] Checking for CVMFS
[2026-01-11 02:18:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:18:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:18:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:18:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:18:09] 2.11.2.0 23910 37626 127016 154999 2 15 16551933 25165825 96 130560 0 16361810 99.801 11572266 3755 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-11 02:18:09] CVMFS is ok
[2026-01-11 02:18:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:18:09] Checking for apptainer binary...
[2026-01-11 02:18:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 02:18:09] Running /usr/bin/apptainer --version
[2026-01-11 02:18:09] apptainer version 1.3.2-1.el7
[2026-01-11 02:18:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:18:31] cg-vwn369.simple-grid.lan
[2026-01-11 02:18:31] apptainer works
[2026-01-11 02:18:32] Set ATHENA_PROC_NUMBER=8
[2026-01-11 02:18:32] Set ATHENA_CORE_NUMBER=8
[2026-01-11 02:18:32] Starting ATLAS job with PandaID=6962317406
[2026-01-11 02:18:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:49:20]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:49:20] 2026-01-11 06:48:34,923 | INFO     | time since job start (19558s) is within the limit (174528.0s)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,476 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:49:20] 2026-01-11 06:48:35,477 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 07:49:20] 2026-01-11 06:48:35,478 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962317406/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,479 | INFO     | extracted standard info from prmon json
[2026-01-11 07:49:20] 2026-01-11 06:48:35,479 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:49:20] 2026-01-11 06:48:35,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:49:20] 2026-01-11 06:48:35,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:49:20] 2026-01-11 06:48:35,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:49:20] 2026-01-11 06:48:35,486 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:49:20] 2026-01-11 06:48:35,487 | INFO     | sum of square deviations: 9417545878.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,490 | INFO     | sum of deviations: 116839888610.00003
[2026-01-11 07:49:20] 2026-01-11 06:48:35,491 | INFO     | mean x: 1768104604.5
[2026-01-11 07:49:20] 2026-01-11 06:48:35,491 | INFO     | mean y: 2445815.814102564
[2026-01-11 07:49:20] 2026-01-11 06:48:35,491 | INFO     | intersect: -21933751545.666718
[2026-01-11 07:49:20] 2026-01-11 06:48:35,491 | INFO     | chi2: 7.877354780750948
[2026-01-11 07:49:20] 2026-01-11 06:48:35,492 | INFO     | sum of square deviations: 8971993338.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,495 | INFO     | sum of deviations: 135203248151.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,495 | INFO     | mean x: 1768104452.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,495 | INFO     | mean y: 2452009.1433224757
[2026-01-11 07:49:20] 2026-01-11 06:48:35,496 | INFO     | intersect: -26641957541.202232
[2026-01-11 07:49:20] 2026-01-11 06:48:35,496 | INFO     | chi2: 7.163752186916831
[2026-01-11 07:49:20] 2026-01-11 06:48:35,496 | INFO     | current chi2=7.163752186916831 (change=9.058911445474964 %)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,496 | INFO     | right removable region: 306
[2026-01-11 07:49:20] 2026-01-11 06:48:35,497 | INFO     | sum of square deviations: 8971993338.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,500 | INFO     | sum of deviations: 8482049695.000061
[2026-01-11 07:49:20] 2026-01-11 06:48:35,500 | INFO     | mean x: 1768104757.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,500 | INFO     | mean y: 2482881.293159609
[2026-01-11 07:49:20] 2026-01-11 06:48:35,500 | INFO     | intersect: -1669069007.9978225
[2026-01-11 07:49:20] 2026-01-11 06:48:35,501 | INFO     | chi2: 3.052712390678226
[2026-01-11 07:49:20] 2026-01-11 06:48:35,501 | INFO     | current chi2=3.052712390678226 (change=61.24698613120976 %)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,502 | INFO     | sum of square deviations: 8540720135.5
[2026-01-11 07:49:20] 2026-01-11 06:48:35,505 | INFO     | sum of deviations: -59920967858.5
[2026-01-11 07:49:20] 2026-01-11 06:48:35,505 | INFO     | mean x: 1768104909.5
[2026-01-11 07:49:20] 2026-01-11 06:48:35,505 | INFO     | mean y: 2506999.354304636
[2026-01-11 07:49:20] 2026-01-11 06:48:35,505 | INFO     | intersect: 12407381034.76878
[2026-01-11 07:49:20] 2026-01-11 06:48:35,506 | INFO     | chi2: 1.0239885372793274
[2026-01-11 07:49:20] 2026-01-11 06:48:35,506 | INFO     | current chi2=1.0239885372793274 (change=66.4564359090564 %)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,506 | INFO     | sum of square deviations: 8123493708.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,509 | INFO     | sum of deviations: -65522042057.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,510 | INFO     | mean x: 1768105062.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,510 | INFO     | mean y: 2509020.0303030303
[2026-01-11 07:49:20] 2026-01-11 06:48:35,510 | INFO     | intersect: 14263596477.93895
[2026-01-11 07:49:20] 2026-01-11 06:48:35,510 | INFO     | chi2: 0.9757646398812903
[2026-01-11 07:49:20] 2026-01-11 06:48:35,510 | INFO     | current chi2=0.9757646398812903 (change=4.709417697796203 %)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,511 | INFO     | left removable region: 30
[2026-01-11 07:49:20] 2026-01-11 06:48:35,511 | INFO     | sum of square deviations: 6519285025.0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,514 | INFO     | sum of deviations: -16974243964.5
[2026-01-11 07:49:20] 2026-01-11 06:48:35,514 | INFO     | mean x: 1768105336.5
[2026-01-11 07:49:20] 2026-01-11 06:48:35,514 | INFO     | mean y: 2505139.887681159
[2026-01-11 07:49:20] 2026-01-11 06:48:35,514 | INFO     | intersect: 4606115999.298658
[2026-01-11 07:49:20] 2026-01-11 06:48:35,514 | INFO     | chi2: 0.11785034557403826
[2026-01-11 07:49:20] 2026-01-11 06:48:35,515 | INFO     | current memory leak: -2.60 B/s (using 276 data points, chi2=0.12)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,515 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,515 | INFO     | ..............................
[2026-01-11 07:49:20] 2026-01-11 06:48:35,515 | INFO     | . Timing measurements:
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . get job = 0 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . initial setup = 8 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . payload setup = 162 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . stage-in = 0 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . payload execution = 19158 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . stage-out = 1 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | . log creation = 0 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,516 | INFO     | ..............................
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | 
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | job summary report
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | --------------------------------------------------
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | PanDA job id: 6962317406
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | task id: 47898826
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | errors: (none)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:49:20] 2026-01-11 06:48:35,629 | INFO     | pilot state: finished 
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | transexitcode: 0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | exeerrorcode: 0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | exeerrordiag: 
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | exitcode: 0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | exitmsg: OK
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | cpuconsumptiontime: 78978 s
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | nevents: 400
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | neventsw: 0
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | pid: 24620
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | pgrp: 24620
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | corecount: 8
[2026-01-11 07:49:20] 2026-01-11 06:48:35,630 | INFO     | event service: False
[2026-01-11 07:49:20] 2026-01-11 06:48:35,631 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2283996, 12: 2284024, 23: 2284052, 34: 2284080, 44: 2284236, 55: 2284264, 66: 2284292, 77: 2284320, 87: 2284376, 98: 2284684, 10
[2026-01-11 07:49:20] 2026-01-11 06:48:35,631 | INFO     | --------------------------------------------------
[2026-01-11 07:49:20] 2026-01-11 06:48:35,631 | INFO     | 
[2026-01-11 07:49:20] 2026-01-11 06:48:35,631 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-11 07:49:20] 2026-01-11 06:48:35,654 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | job 6962317406 has completed (purged errors)
[2026-01-11 07:49:20] 2026-01-11 06:48:35,656 | INFO     | overall cleanup function is called
[2026-01-11 07:49:20] 2026-01-11 06:48:36,665 | INFO     | --- collectZombieJob: --- 10, [24620]
[2026-01-11 07:49:20] 2026-01-11 06:48:36,665 | INFO     | zombie collector waiting for pid 24620
[2026-01-11 07:49:20] 2026-01-11 06:48:36,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:49:20] 2026-01-11 06:48:36,665 | INFO     | collected zombie processes
[2026-01-11 07:49:20] 2026-01-11 06:48:36,665 | INFO     | will attempt to kill all subprocesses of pid=24620
[2026-01-11 07:49:20] 2026-01-11 06:48:36,740 | INFO     | process IDs to be killed: [24620] (in reverse order)
[2026-01-11 07:49:20] 2026-01-11 06:48:36,806 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:49:20] 2026-01-11 06:48:36,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:49:20] 2026-01-11 06:48:36,809 | INFO     | did not find any defunct processes belonging to 24620
[2026-01-11 07:49:20] 2026-01-11 06:48:36,811 | INFO     | did not find any defunct processes belonging to 24620
[2026-01-11 07:49:20] 2026-01-11 06:48:36,811 | INFO     | ready for new job
[2026-01-11 07:49:20] 2026-01-11 06:48:36,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:49:20] 2026-01-11 06:48:36,813 | INFO     | ***************************************
[2026-01-11 07:49:20] 2026-01-11 06:48:36,813 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:49:20] 2026-01-11 06:48:36,814 | INFO     | ***************************************
[2026-01-11 07:49:20] 2026-01-11 06:48:36,814 | INFO     | 
[2026-01-11 07:49:20] 2026-01-11 06:48:36,814 | INFO     | pilot is running in a VM
[2026-01-11 07:49:20] 2026-01-11 06:48:36,815 | INFO     | architecture information:
[2026-01-11 07:49:20] 2026-01-11 06:48:36,815 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:49:20] 2026-01-11 06:48:36,832 | INFO     | cat /etc/os-release:
[2026-01-11 07:49:20] NAME="CentOS Linux"
[2026-01-11 07:49:20] VERSION="7 (Core)"
[2026-01-11 07:49:20] ID="centos"
[2026-01-11 07:49:20] ID_LIKE="rhel fedora"
[2026-01-11 07:49:20] VERSION_ID="7"
[2026-01-11 07:49:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:49:20] ANSI_COLOR="0;31"
[2026-01-11 07:49:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:49:20] HOME_URL="https://www.centos.org/"
[2026-01-11 07:49:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:49:20] 
[2026-01-11 07:49:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:49:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:49:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:49:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:49:20] 
[2026-01-11 07:49:20] 2026-01-11 06:48:36,832 | INFO     | ***************************************
[2026-01-11 07:49:20] 2026-01-11 06:48:37,335 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-11 07:49:20] 2026-01-11 06:48:37,361 | INFO     | sufficient remaining disk space (498114494464 B)
[2026-01-11 07:49:20] 2026-01-11 06:48:37,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:49:20] 2026-01-11 06:48:37,362 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:49:20] 2026-01-11 06:48:37,362 | INFO     | update_server=False
[2026-01-11 07:49:20] 2026-01-11 06:48:37,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:49:20] 2026-01-11 06:48:37,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:49:20] 2026-01-11 06:48:37,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:49:20] 2026-01-11 06:48:37,363 | INFO     | aborting loop
[2026-01-11 07:49:20] 2026-01-11 06:48:37,422 | INFO     | all job control threads have been joined
[2026-01-11 07:49:20] 2026-01-11 06:48:37,792 | INFO     | all payload control threads have been joined
[2026-01-11 07:49:20] 2026-01-11 06:48:37,908 | INFO     | all data control threads have been joined
[2026-01-11 07:49:20] 2026-01-11 06:48:38,368 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,368 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,370 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,415 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,426 | INFO     | [job] control thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:49:20] 2026-01-11 06:48:38,466 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,708 | INFO     | [job] validate thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,798 | INFO     | [payload] control thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,913 | INFO     | [data] control thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:38,979 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:39,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:39,456 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:39,514 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:39,520 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:40,435 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:48:40,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:49:20] 2026-01-11 06:48:44,734 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:49:20] 2026-01-11 06:49:08,093 | INFO     | PID=18135 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:49:20] 2026-01-11 06:49:08,094 | INFO     | .. there are 2 such processes running
[2026-01-11 07:49:20] 2026-01-11 06:49:08,094 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:49:20] 2026-01-11 06:49:08,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:49:20] 2026-01-11 06:49:08,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:49:20] 2026-01-11 06:49:10,092 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:49:20] 2026-01-11 06:49:10,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718715672384)>', '<ExcThread(monitor, started 140718135822080)>']
[2026-01-11 07:49:20] 2026-01-11 06:49:11,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:49:20] 2026-01-11 06:49:11,117 | INFO     | [monitor] control thread has ended
[2026-01-11 07:49:20] 2026-01-11 06:49:15,964 | INFO     | all workflow threads have been joined
[2026-01-11 07:49:20] 2026-01-11 06:49:15,964 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:49:20] 2026-01-11 06:49:15,964 | INFO     | traces error code: 0
[2026-01-11 07:49:20] 2026-01-11 06:49:15,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:49:20] 2026-01-11 06:49:16,157 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:49:20] 2026-01-11 06:49:16,251 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:49:20] 2026-01-11 06:49:16,317 [wrapper] pilotpid: 18135
[2026-01-11 07:49:20] 2026-01-11 06:49:16,435 [wrapper] Pilot exit status: 0
[2026-01-11 07:49:20] 2026-01-11 06:49:16,910 [wrapper] pandaids: 6962317406
[2026-01-11 07:49:20] 2026-01-11 06:49:17,408 [wrapper] cleanup supervisor_pilot 32415 18136
[2026-01-11 07:49:20] 2026-01-11 06:49:17,449 [wrapper] Test setup, not cleaning
[2026-01-11 07:49:20] 2026-01-11 06:49:17,549 [wrapper] apfmon messages muted
[2026-01-11 07:49:20] 2026-01-11 06:49:17,665 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:49:20] 2026-01-11 06:49:17,785 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:49:20]  *** Error codes and diagnostics ***
[2026-01-11 07:49:20]     "exeErrorCode": 0,
[2026-01-11 07:49:20]     "exeErrorDiag": "",
[2026-01-11 07:49:20]     "pilotErrorCode": 0,
[2026-01-11 07:49:20]     "pilotErrorDiag": "",
[2026-01-11 07:49:20]  *** Listing of results directory ***
[2026-01-11 07:49:20] total 438180
[2026-01-11 07:49:20] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc       100 Jan 11 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:49:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 02:18 run_atlas
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc       105 Jan 11 02:18 job.xml
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc      6390 Jan 11 02:18 init_data.xml
[2026-01-11 07:49:20] -rw-r--r--. 2 boinc boinc 223521786 Jan 11 02:18 EVNT.47898824._000536.pool.root.1
[2026-01-11 07:49:20] -rw-r--r--. 2 boinc boinc     15847 Jan 11 02:18 start_atlas.sh
[2026-01-11 07:49:20] drwxrwx--x. 2 boinc boinc        68 Jan 11 02:18 shared
[2026-01-11 07:49:20] -rw-r--r--. 2 boinc boinc    592402 Jan 11 02:18 input.tar.gz
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc         0 Jan 11 02:18 boinc_lockfile
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc      2518 Jan 11 02:18 pandaJob.out
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc    989545 Jan 11 02:22 agis_schedconf.cvmfs.json
[2026-01-11 07:49:20] drwx------. 5 boinc boinc      4096 Jan 11 02:22 pilot3
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc 215003991 Jan 11 07:47 HITS.47898826._012640.pool.root.1
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc       530 Jan 11 07:47 boinc_task_state.xml
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc      1021 Jan 11 07:48 memory_monitor_summary.json
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc   1516240 Jan 11 07:48 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc    540113 Jan 11 07:48 log.47898826._012640.job.log.tgz.1
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc      7782 Jan 11 07:48 heartbeat.json
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc        28 Jan 11 07:48 wrapper_checkpoint.txt
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc      8192 Jan 11 07:48 boinc_mmap_file
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc        95 Jan 11 07:49 pilot_heartbeat.json
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc      4884 Jan 11 07:49 pilotlog.txt
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc   2597996 Jan 11 07:49 log.47898826._012640.job.log.1
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc       357 Jan 11 07:49 output.list
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc       620 Jan 11 07:49 runtime_log
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc   3153920 Jan 11 07:49 result.tar.gz
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc      8817 Jan 11 07:49 runtime_log.err
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc       657 Jan 11 07:49 KLFNDmClpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUliKDmmwspPn.diag
[2026-01-11 07:49:20] -rw-r--r--. 1 boinc boinc     20761 Jan 11 07:49 stderr.txt
[2026-01-11 07:49:20] HITS file was successfully produced:
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc 215003991 Jan 11 07:47 shared/HITS.pool.root.1
[2026-01-11 07:49:20]  *** Contents of shared directory: ***
[2026-01-11 07:49:20] total 431928
[2026-01-11 07:49:20] -rw-r--r--. 2 boinc boinc 223521786 Jan 11 02:18 ATLAS.root_0
[2026-01-11 07:49:20] -rw-r--r--. 2 boinc boinc     15847 Jan 11 02:18 start_atlas.sh
[2026-01-11 07:49:20] -rw-r--r--. 2 boinc boinc    592402 Jan 11 02:18 input.tar.gz
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc 215003991 Jan 11 07:47 HITS.pool.root.1
[2026-01-11 07:49:20] -rw-------. 1 boinc boinc   3153920 Jan 11 07:49 result.tar.gz
07:49:22 (14414): run_atlas exited; CPU time 79163.717220
07:49:22 (14414): called boinc_finish(0)

</stderr_txt>
]]>

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