Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:34:26 (16276): wrapper (7.7.26015): starting
06:34:26 (16276): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 06:34:26] Arguments: --nthreads 8
[2026-01-10 06:34:26] Threads: 8
[2026-01-10 06:34:26] Checking for CVMFS
[2026-01-10 06:34:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:34:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:34:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:34:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:34:29] 2.11.2.0 7658 36423 127644 154969 1 60 18377796 25165824 899 130560 0 18861467 99.820 12812946 3386 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 06:34:29] CVMFS is ok
[2026-01-10 06:34:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:34:29] Checking for apptainer binary...
[2026-01-10 06:34:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:34:29] Running /usr/bin/apptainer --version
[2026-01-10 06:34:29] apptainer version 1.3.2-1.el7
[2026-01-10 06:34:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:34:43] cg-vwn458.simple-grid.lan
[2026-01-10 06:34:43] apptainer works
[2026-01-10 06:34:43] Set ATHENA_PROC_NUMBER=8
[2026-01-10 06:34:43] Set ATHENA_CORE_NUMBER=8
[2026-01-10 06:34:43] Starting ATLAS job with PandaID=6963199516
[2026-01-10 06:34:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:14:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:14:29] 2026-01-10 18:13:24,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:29] 2026-01-10 18:13:26,103 | INFO     | time since job start (45266s) is within the limit (349056.0s)
[2026-01-10 19:14:29] 2026-01-10 18:13:26,733 | INFO     | monitor loop #3138: job 0:6963199516 is in state 'finished'
[2026-01-10 19:14:29] 2026-01-10 18:13:26,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:29] 2026-01-10 18:13:28,110 | INFO     | time since job start (45268s) is within the limit (349056.0s)
[2026-01-10 19:14:29] 2026-01-10 18:13:29,248 | INFO     | monitor loop #3139: job 0:6963199516 is in state 'finished'
[2026-01-10 19:14:29] 2026-01-10 18:13:29,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:29] 2026-01-10 18:13:30,116 | INFO     | time since job start (45270s) is within the limit (349056.0s)
[2026-01-10 19:14:29] 2026-01-10 18:13:31,753 | INFO     | monitor loop #3140: job 0:6963199516 is in state 'finished'
[2026-01-10 19:14:29] 2026-01-10 18:13:31,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:29] 2026-01-10 18:13:32,126 | INFO     | time since job start (45272s) is within the limit (349056.0s)
[2026-01-10 19:14:29] 2026-01-10 18:13:34,137 | INFO     | time since job start (45274s) is within the limit (349056.0s)
[2026-01-10 19:14:29] 2026-01-10 18:13:34,263 | INFO     | monitor loop #3141: job 0:6963199516 is in state 'finished'
[2026-01-10 19:14:29] 2026-01-10 18:13:34,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,098 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:14:29] 2026-01-10 18:13:35,099 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 19:14:29] 2026-01-10 18:13:35,100 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963199516/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,101 | INFO     | extracted standard info from prmon json
[2026-01-10 19:14:29] 2026-01-10 18:13:35,101 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:14:29] 2026-01-10 18:13:35,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:14:29] 2026-01-10 18:13:35,115 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:14:29] 2026-01-10 18:13:35,122 | INFO     | sum of square deviations: 121123318003.07535
[2026-01-10 19:14:29] 2026-01-10 18:13:35,137 | INFO     | sum of deviations: 798865005239.017
[2026-01-10 19:14:29] 2026-01-10 18:13:35,137 | INFO     | mean x: 1768046394.9179206
[2026-01-10 19:14:29] 2026-01-10 18:13:35,137 | INFO     | mean y: 2621023.983584131
[2026-01-10 19:14:29] 2026-01-10 18:13:35,137 | INFO     | intersect: -11658472940.624187
[2026-01-10 19:14:29] 2026-01-10 18:13:35,138 | INFO     | chi2: 35.91187745038697
[2026-01-10 19:14:29] 2026-01-10 18:13:35,139 | INFO     | sum of square deviations: 118655039161.33337
[2026-01-10 19:14:29] 2026-01-10 18:13:35,187 | INFO     | sum of deviations: 1025216380540.9065
[2026-01-10 19:14:29] 2026-01-10 18:13:35,188 | INFO     | mean x: 1768046242.4242425
[2026-01-10 19:14:29] 2026-01-10 18:13:35,188 | INFO     | mean y: 2635012.5165289254
[2026-01-10 19:14:29] 2026-01-10 18:13:35,188 | INFO     | intersect: -15273833497.367218
[2026-01-10 19:14:29] 2026-01-10 18:13:35,189 | INFO     | chi2: 32.376493686261675
[2026-01-10 19:14:29] 2026-01-10 18:13:35,189 | INFO     | current chi2=32.376493686261675 (change=9.844608567205936 %)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,189 | INFO     | right removable region: 725
[2026-01-10 19:14:29] 2026-01-10 18:13:35,190 | INFO     | sum of square deviations: 118654629851.33334
[2026-01-10 19:14:29] 2026-01-10 18:13:35,204 | INFO     | sum of deviations: 508018297690.45483
[2026-01-10 19:14:29] 2026-01-10 18:13:35,205 | INFO     | mean x: 1768046547.4242425
[2026-01-10 19:14:29] 2026-01-10 18:13:35,205 | INFO     | mean y: 2638991.371900826
[2026-01-10 19:14:29] 2026-01-10 18:13:35,205 | INFO     | intersect: -7567229949.986197
[2026-01-10 19:14:29] 2026-01-10 18:13:35,206 | INFO     | chi2: 30.676366729435788
[2026-01-10 19:14:29] 2026-01-10 18:13:35,206 | INFO     | current chi2=30.676366729435788 (change=14.578771962518946 %)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,206 | INFO     | left removable region: 10
[2026-01-10 19:14:29] 2026-01-10 18:13:35,207 | INFO     | sum of square deviations: 113342543265.29219
[2026-01-10 19:14:29] 2026-01-10 18:13:35,224 | INFO     | sum of deviations: 523993680604.63153
[2026-01-10 19:14:29] 2026-01-10 18:13:35,224 | INFO     | mean x: 1768046516.9384615
[2026-01-10 19:14:29] 2026-01-10 18:13:35,224 | INFO     | mean y: 2673265.1734265736
[2026-01-10 19:14:29] 2026-01-10 18:13:35,224 | INFO     | intersect: -8171178981.306735
[2026-01-10 19:14:29] 2026-01-10 18:13:35,225 | INFO     | chi2: 22.00991469384293
[2026-01-10 19:14:29] 2026-01-10 18:13:35,225 | INFO     | current memory leak: 4.62 B/s (using 715 data points, chi2=22.01)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,226 | INFO     | could have reported an average CPU frequency of 2250 MHz (26 samples)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | ..............................
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . Timing measurements:
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . get job = 0 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . initial setup = 11 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . payload setup = 202 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . stage-in = 0 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . payload execution = 44737 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . stage-out = 4 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | . log creation = 2 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,227 | INFO     | ..............................
[2026-01-10 19:14:29] 2026-01-10 18:13:35,704 | INFO     | 
[2026-01-10 19:14:29] 2026-01-10 18:13:35,704 | INFO     | job summary report
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | --------------------------------------------------
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | PanDA job id: 6963199516
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | task id: 47962010
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | errors: (none)
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | pilot state: finished 
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | transexitcode: 0
[2026-01-10 19:14:29] 2026-01-10 18:13:35,705 | INFO     | exeerrorcode: 0
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | exeerrordiag: 
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | exitcode: 0
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | exitmsg: OK
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | cpuconsumptiontime: 165145 s
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | nevents: 450
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | neventsw: 0
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | pid: 26497
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | pgrp: 26497
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | corecount: 8
[2026-01-10 19:14:29] 2026-01-10 18:13:35,706 | INFO     | event service: False
[2026-01-10 19:14:29] 2026-01-10 18:13:35,707 | INFO     | sizes: {0: 2284394, 1: 2284649, 12: 2284649, 23: 2284677, 33: 2284705, 44: 2284761, 55: 2284917, 66: 2284945, 76: 2284973, 87: 2285029, 98: 2285057, 109: 2285365, 
[2026-01-10 19:14:29] 2026-01-10 18:13:35,707 | INFO     | --------------------------------------------------
[2026-01-10 19:14:29] 2026-01-10 18:13:35,707 | INFO     | 
[2026-01-10 19:14:29] 2026-01-10 18:13:35,707 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-10 19:14:29] 2026-01-10 18:13:36,156 | INFO     | time since job start (45276s) is within the limit (349056.0s)
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,265 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:14:29] 2026-01-10 18:13:36,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,265 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:14:29] 2026-01-10 18:13:36,265 | INFO     | job 6963199516 has completed (purged errors)
[2026-01-10 19:14:29] 2026-01-10 18:13:36,265 | INFO     | overall cleanup function is called
[2026-01-10 19:14:29] 2026-01-10 18:13:37,285 | INFO     | --- collectZombieJob: --- 10, [26497]
[2026-01-10 19:14:29] 2026-01-10 18:13:37,285 | INFO     | zombie collector waiting for pid 26497
[2026-01-10 19:14:29] 2026-01-10 18:13:37,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:14:29] 2026-01-10 18:13:37,286 | INFO     | collected zombie processes
[2026-01-10 19:14:29] 2026-01-10 18:13:37,286 | INFO     | will attempt to kill all subprocesses of pid=26497
[2026-01-10 19:14:29] 2026-01-10 18:13:37,371 | INFO     | process IDs to be killed: [26497] (in reverse order)
[2026-01-10 19:14:29] 2026-01-10 18:13:38,254 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:14:29] 2026-01-10 18:13:38,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:14:29] 2026-01-10 18:13:38,256 | INFO     | did not find any defunct processes belonging to 26497
[2026-01-10 19:14:29] 2026-01-10 18:13:38,258 | INFO     | did not find any defunct processes belonging to 26497
[2026-01-10 19:14:29] 2026-01-10 18:13:38,258 | INFO     | ready for new job
[2026-01-10 19:14:29] 2026-01-10 18:13:38,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:14:29] 2026-01-10 18:13:38,262 | INFO     | ***************************************
[2026-01-10 19:14:29] 2026-01-10 18:13:38,262 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:14:29] 2026-01-10 18:13:38,262 | INFO     | ***************************************
[2026-01-10 19:14:29] 2026-01-10 18:13:38,262 | INFO     | 
[2026-01-10 19:14:29] 2026-01-10 18:13:38,263 | INFO     | pilot is running in a VM
[2026-01-10 19:14:29] 2026-01-10 18:13:38,263 | INFO     | architecture information:
[2026-01-10 19:14:29] 2026-01-10 18:13:38,274 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:14:29] 2026-01-10 18:13:38,431 | INFO     | cat /etc/os-release:
[2026-01-10 19:14:29] NAME="CentOS Linux"
[2026-01-10 19:14:29] VERSION="7 (Core)"
[2026-01-10 19:14:29] ID="centos"
[2026-01-10 19:14:29] ID_LIKE="rhel fedora"
[2026-01-10 19:14:29] VERSION_ID="7"
[2026-01-10 19:14:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:14:29] ANSI_COLOR="0;31"
[2026-01-10 19:14:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:14:29] HOME_URL="https://www.centos.org/"
[2026-01-10 19:14:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:14:29] 
[2026-01-10 19:14:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:14:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:14:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:14:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:14:29] 
[2026-01-10 19:14:29] 2026-01-10 18:13:38,431 | INFO     | ***************************************
[2026-01-10 19:14:29] 2026-01-10 18:13:38,934 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-10 19:14:29] 2026-01-10 18:13:39,173 | INFO     | sufficient remaining disk space (497257807872 B)
[2026-01-10 19:14:29] 2026-01-10 18:13:39,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:14:29] 2026-01-10 18:13:39,173 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:14:29] 2026-01-10 18:13:39,173 | INFO     | update_server=False
[2026-01-10 19:14:29] 2026-01-10 18:13:39,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:14:29] 2026-01-10 18:13:39,307 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:14:29] 2026-01-10 18:13:39,307 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:14:29] 2026-01-10 18:13:39,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:14:29] 2026-01-10 18:13:39,308 | INFO     | will abort loop
[2026-01-10 19:14:29] 2026-01-10 18:13:39,450 | INFO     | all payload control threads have been joined
[2026-01-10 19:14:29] 2026-01-10 18:13:39,822 | INFO     | all data control threads have been joined
[2026-01-10 19:14:29] 2026-01-10 18:13:40,086 | INFO     | all job control threads have been joined
[2026-01-10 19:14:29] 2026-01-10 18:13:40,179 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,187 | INFO     | [job] validate thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,199 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,313 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:14:29] 2026-01-10 18:13:40,457 | INFO     | [payload] control thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,548 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:14:29] 2026-01-10 18:13:40,702 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,802 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,828 | INFO     | [data] control thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:40,855 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:41,092 | INFO     | [job] control thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:41,303 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:41,361 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:41,497 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:41,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:14:29] 2026-01-10 18:13:42,682 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:13:45,636 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:14:29] 2026-01-10 18:14:09,488 | INFO     | PID=20012 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 19:14:29] 2026-01-10 18:14:09,488 | INFO     | .. there are 2 such processes running
[2026-01-10 19:14:29] 2026-01-10 18:14:09,490 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:14:29] 2026-01-10 18:14:09,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:14:29] 2026-01-10 18:14:09,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:14:29] 2026-01-10 18:14:18,813 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:14:29] 2026-01-10 18:14:19,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630915512128)>', '<ExcThread(monitor, started 139630619895552)>']
[2026-01-10 19:14:29] 2026-01-10 18:14:19,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:14:29] 2026-01-10 18:14:19,550 | INFO     | [monitor] control thread has ended
[2026-01-10 19:14:29] 2026-01-10 18:14:24,437 | INFO     | all workflow threads have been joined
[2026-01-10 19:14:29] 2026-01-10 18:14:24,437 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:14:29] 2026-01-10 18:14:24,438 | INFO     | traces error code: 0
[2026-01-10 19:14:29] 2026-01-10 18:14:24,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:14:29] 2026-01-10 18:14:24,825 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:14:29] 2026-01-10 18:14:24,954 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:14:29] 2026-01-10 18:14:25,041 [wrapper] pilotpid: 20012
[2026-01-10 19:14:29] 2026-01-10 18:14:25,098 [wrapper] Pilot exit status: 0
[2026-01-10 19:14:29] 2026-01-10 18:14:25,480 [wrapper] pandaids: 6963199516
[2026-01-10 19:14:29] 2026-01-10 18:14:26,467 [wrapper] cleanup supervisor_pilot  5262 20013
[2026-01-10 19:14:29] 2026-01-10 18:14:26,567 [wrapper] Test setup, not cleaning
[2026-01-10 19:14:29] 2026-01-10 18:14:26,622 [wrapper] apfmon messages muted
[2026-01-10 19:14:29] 2026-01-10 18:14:26,717 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:14:29] 2026-01-10 18:14:26,826 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:14:29]  *** Error codes and diagnostics ***
[2026-01-10 19:14:30]     "exeErrorCode": 0,
[2026-01-10 19:14:30]     "exeErrorDiag": "",
[2026-01-10 19:14:30]     "pilotErrorCode": 0,
[2026-01-10 19:14:30]     "pilotErrorDiag": "",
[2026-01-10 19:14:30]  *** Listing of results directory ***
[2026-01-10 19:14:30] total 789724
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc    579449 Jan  9 08:13 pilot3.tar.gz
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc      5112 Jan  9 08:13 queuedata.json
[2026-01-10 19:14:30] -rwx------. 1 boinc boinc     36322 Jan  9 08:14 runpilot2-wrapper.sh
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc       100 Jan 10 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:14:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 06:34 run_atlas
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc       105 Jan 10 06:34 job.xml
[2026-01-10 19:14:30] -rw-r--r--. 2 boinc boinc 393424110 Jan 10 06:34 EVNT.47962006._000071.pool.root.1
[2026-01-10 19:14:30] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:34 start_atlas.sh
[2026-01-10 19:14:30] drwxrwx--x. 2 boinc boinc        68 Jan 10 06:34 shared
[2026-01-10 19:14:30] -rw-r--r--. 2 boinc boinc    592606 Jan 10 06:34 input.tar.gz
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc      6389 Jan 10 06:34 init_data.xml
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc         0 Jan 10 06:34 boinc_lockfile
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc      2891 Jan 10 06:34 pandaJob.out
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc    989374 Jan 10 06:38 agis_schedconf.cvmfs.json
[2026-01-10 19:14:30] drwx------. 5 boinc boinc      4096 Jan 10 06:39 pilot3
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc       533 Jan 10 18:39 boinc_task_state.xml
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc 395387279 Jan 10 19:10 HITS.47962010._000920.pool.root.1
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc      1030 Jan 10 19:11 memory_monitor_summary.json
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc   1516240 Jan 10 19:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc   1852992 Jan 10 19:11 log.47962010._000920.job.log.tgz.1
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc      8614 Jan 10 19:13 heartbeat.json
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc      8192 Jan 10 19:14 boinc_mmap_file
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc        29 Jan 10 19:14 wrapper_checkpoint.txt
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc        95 Jan 10 19:14 pilot_heartbeat.json
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc      5071 Jan 10 19:14 pilotlog.txt
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc   6129311 Jan 10 19:14 log.47962010._000920.job.log.1
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc       353 Jan 10 19:14 output.list
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc       620 Jan 10 19:14 runtime_log
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc   7997440 Jan 10 19:14 result.tar.gz
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc      8833 Jan 10 19:14 runtime_log.err
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc       661 Jan 10 19:14 dC8LDmFsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7FhKDmkXhyXn.diag
[2026-01-10 19:14:30] -rw-r--r--. 1 boinc boinc     21332 Jan 10 19:14 stderr.txt
[2026-01-10 19:14:30] HITS file was successfully produced:
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc 395387279 Jan 10 19:10 shared/HITS.pool.root.1
[2026-01-10 19:14:30]  *** Contents of shared directory: ***
[2026-01-10 19:14:30] total 778736
[2026-01-10 19:14:30] -rw-r--r--. 2 boinc boinc 393424110 Jan 10 06:34 ATLAS.root_0
[2026-01-10 19:14:30] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:34 start_atlas.sh
[2026-01-10 19:14:30] -rw-r--r--. 2 boinc boinc    592606 Jan 10 06:34 input.tar.gz
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc 395387279 Jan 10 19:10 HITS.pool.root.1
[2026-01-10 19:14:30] -rw-------. 1 boinc boinc   7997440 Jan 10 19:14 result.tar.gz
19:14:31 (16276): run_atlas exited; CPU time 165306.002337
19:14:31 (16276): called boinc_finish(0)

</stderr_txt>
]]>

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