Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:59:56 (546396): wrapper (7.7.26015): starting
05:59:56 (546396): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 05:59:56] Arguments: --nthreads 12
[2026-01-10 05:59:56] Threads: 12
[2026-01-10 05:59:56] Checking for CVMFS
[2026-01-10 05:59:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 05:59:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 05:59:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 05:59:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 05:59:56] 2.13.3.0 2099 579 55220 154969 1 253 2854827 4096001 922 130560 0 1617952 99.994 19453 548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 05:59:56] CVMFS is ok
[2026-01-10 05:59:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 05:59:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 05:59:56] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 05:59:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 05:59:56] Further information can be found at the LHC@home message board.
[2026-01-10 05:59:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 05:59:56] Checking for apptainer binary...
[2026-01-10 05:59:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 05:59:56] Running /usr/bin/apptainer --version
[2026-01-10 05:59:56] apptainer version 1.4.5
[2026-01-10 05:59:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 05:59:56] test-run
[2026-01-10 05:59:56] apptainer works
[2026-01-10 05:59:56] Set ATHENA_PROC_NUMBER=12
[2026-01-10 05:59:56] Set ATHENA_CORE_NUMBER=12
[2026-01-10 05:59:56] Starting ATLAS job with PandaID=6964539293
[2026-01-10 05:59:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 06:22:11]  *** The last 200 lines of the pilot log: ***
[2026-01-10 06:22:11]  protocol_id=None
[2026-01-10 06:22:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 06:22:11]  replicas=None
[2026-01-10 06:22:11]  scope=mc16_13TeV
[2026-01-10 06:22:11]  status=None
[2026-01-10 06:22:11]  status_code=0
[2026-01-10 06:22:11]  storage_token=
[2026-01-10 06:22:11]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6964539293/log.47962010._001857.job.log.tgz.1
[2026-01-10 06:22:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f2/71/log.47962010._001857.job.log.tgz.1
[2026-01-10 06:22:11]  workdir=None
[2026-01-10 06:22:11] ]
[2026-01-10 06:22:11] 2026-01-10 06:21:38,429 | INFO     | transferring file log.47962010._001857.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6964539293/log.47962010._001857.job.log.tgz.1 to /var/lib/boinc
[2026-01-10 06:22:11] 2026-01-10 06:21:38,429 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6964539293/log.47962010._001857.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.479620
[2026-01-10 06:22:11] 2026-01-10 06:21:38,440 | INFO     | adding to output.list: log.47962010._001857.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f2/71/log.47962010._001857.job.log.tgz.
[2026-01-10 06:22:11] 2026-01-10 06:21:38,441 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 06:22:11] 2026-01-10 06:21:38,441 | INFO     | summary of transferred files:
[2026-01-10 06:22:11] 2026-01-10 06:21:38,441 | INFO     |  -- lfn=log.47962010._001857.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 06:22:11] 2026-01-10 06:21:38,441 | INFO     | stage-out finished correctly
[2026-01-10 06:22:11] 2026-01-10 06:21:38,480 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 06:22:11] 2026-01-10 06:21:38,992 | INFO     | time since job start (1295s) is within the limit (349056.0s)
[2026-01-10 06:22:11] 2026-01-10 06:21:39,054 | INFO     | job 6964539293 has state=finished
[2026-01-10 06:22:11] 2026-01-10 06:21:39,054 | INFO     | preparing for final server update for job 6964539293 in state='finished'
[2026-01-10 06:22:11] 2026-01-10 06:21:39,056 | INFO     | this job has now completed (state=finished)
[2026-01-10 06:22:11] 2026-01-10 06:21:39,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 06:22:11] 2026-01-10 06:21:39,056 | INFO     | log transfer has been attempted: DONE
[2026-01-10 06:22:11] 2026-01-10 06:21:39,056 | INFO     | job 6964539293 has finished - writing final server update
[2026-01-10 06:22:11] 2026-01-10 06:21:39,056 | INFO     | total number of processed events: 50 (read)
[2026-01-10 06:22:11] 2026-01-10 06:21:39,060 | INFO     | executing command: lscpu
[2026-01-10 06:22:11] 2026-01-10 06:21:39,083 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 06:22:11] 2026-01-10 06:21:40,157 | WARNING  | process 556917 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 06:22:11] 2026-01-10 06:21:40,157 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6964539293/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:22:11] 2026-01-10 06:21:40,186 | INFO     | number of running child processes to parent process 556917: 1
[2026-01-10 06:22:11] 2026-01-10 06:21:40,186 | INFO     | maximum number of monitored processes: 17
[2026-01-10 06:22:11] 2026-01-10 06:21:40,997 | INFO     | time since job start (1297s) is within the limit (349056.0s)
[2026-01-10 06:22:11] 2026-01-10 06:21:42,689 | INFO     | monitor loop #103: job 0:6964539293 is in state 'finished'
[2026-01-10 06:22:11] 2026-01-10 06:21:42,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,002 | INFO     | time since job start (1300s) is within the limit (349056.0s)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,037 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 06:22:11] 2026-01-10 06:21:43,038 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.975999999998
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6964539293/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | extracted standard info from prmon json
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | fitting pss+swap vs Time
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | sum of square deviations: 846527.5
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | sum of deviations: 2284139479.5
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | mean x: 1768025520.5
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | mean y: 2194065.785714286
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | intersect: -4770565675421.722
[2026-01-10 06:22:11] 2026-01-10 06:21:43,039 | INFO     | chi2: 0.822860193035983
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | current memory leak: 2698.25 B/s (using 14 data points, chi2=0.82)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | ..............................
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . Timing measurements:
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . get job = 0 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . initial setup = 2 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . payload setup = 1 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . stage-in = 0 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . payload execution = 1276 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . stage-out = 0 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | . log creation = 0 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,040 | INFO     | ..............................
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | 
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | job summary report
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | --------------------------------------------------
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | PanDA job id: 6964539293
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | task id: 47962010
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | errors: (none)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,062 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | pilot state: finished 
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | transexitcode: 0
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | exeerrorcode: 0
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | exeerrordiag: 
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | exitcode: 0
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | exitmsg: OK
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | cpuconsumptiontime: 5547 s
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | nevents: 50
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | neventsw: 0
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | pid: 556917
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | pgrp: 556917
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | corecount: 12
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | event service: False
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | sizes: {0: 2284574, 2: 2284836, 10: 2284864, 1282: 2310362, 1284: 2319426, 1288: 2319616}
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | --------------------------------------------------
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | 
[2026-01-10 06:22:11] 2026-01-10 06:21:43,063 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,092 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 06:22:11] 2026-01-10 06:21:43,093 | INFO     | job 6964539293 has completed (purged errors)
[2026-01-10 06:22:11] 2026-01-10 06:21:43,093 | INFO     | overall cleanup function is called
[2026-01-10 06:22:11] 2026-01-10 06:21:44,101 | INFO     | --- collectZombieJob: --- 10, [556917]
[2026-01-10 06:22:11] 2026-01-10 06:21:44,101 | INFO     | zombie collector waiting for pid 556917
[2026-01-10 06:22:11] 2026-01-10 06:21:44,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 06:22:11] 2026-01-10 06:21:44,102 | INFO     | collected zombie processes
[2026-01-10 06:22:11] 2026-01-10 06:21:44,102 | INFO     | will attempt to kill all subprocesses of pid=556917
[2026-01-10 06:22:11] 2026-01-10 06:21:44,131 | INFO     | process IDs to be killed: [556917] (in reverse order)
[2026-01-10 06:22:11] 2026-01-10 06:21:44,163 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 06:22:11] 2026-01-10 06:21:44,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 06:22:11] 2026-01-10 06:21:44,164 | INFO     | did not find any defunct processes belonging to 556917
[2026-01-10 06:22:11] 2026-01-10 06:21:44,165 | INFO     | did not find any defunct processes belonging to 556917
[2026-01-10 06:22:11] 2026-01-10 06:21:44,165 | INFO     | ready for new job
[2026-01-10 06:22:11] 2026-01-10 06:21:44,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 06:22:11] 2026-01-10 06:21:44,166 | INFO     | ***************************************
[2026-01-10 06:22:11] 2026-01-10 06:21:44,166 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 06:22:11] 2026-01-10 06:21:44,166 | INFO     | ***************************************
[2026-01-10 06:22:11] 2026-01-10 06:21:44,166 | INFO     | 
[2026-01-10 06:22:11] 2026-01-10 06:21:44,167 | INFO     | pilot is running in a VM
[2026-01-10 06:22:11] 2026-01-10 06:21:44,167 | INFO     | architecture information:
[2026-01-10 06:22:11] 2026-01-10 06:21:44,167 | INFO     | executing command: cat /etc/os-release
[2026-01-10 06:22:11] 2026-01-10 06:21:44,177 | INFO     | cat /etc/os-release:
[2026-01-10 06:22:11] NAME="CentOS Linux"
[2026-01-10 06:22:11] VERSION="7 (Core)"
[2026-01-10 06:22:11] ID="centos"
[2026-01-10 06:22:11] ID_LIKE="rhel fedora"
[2026-01-10 06:22:11] VERSION_ID="7"
[2026-01-10 06:22:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 06:22:11] ANSI_COLOR="0;31"
[2026-01-10 06:22:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 06:22:11] HOME_URL="https://www.centos.org/"
[2026-01-10 06:22:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 06:22:11] 
[2026-01-10 06:22:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 06:22:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 06:22:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 06:22:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 06:22:11] 
[2026-01-10 06:22:11] 2026-01-10 06:21:44,177 | INFO     | ***************************************
[2026-01-10 06:22:11] 2026-01-10 06:21:44,679 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-10 06:22:11] 2026-01-10 06:21:44,698 | INFO     | sufficient remaining disk space (74252812288 B)
[2026-01-10 06:22:11] 2026-01-10 06:21:44,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 06:22:11] 2026-01-10 06:21:44,698 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 06:22:11] 2026-01-10 06:21:44,698 | INFO     | update_server=False
[2026-01-10 06:22:11] 2026-01-10 06:21:44,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 06:22:11] 2026-01-10 06:21:44,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 06:22:11] 2026-01-10 06:21:44,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 06:22:11] 2026-01-10 06:21:44,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:22:11] 2026-01-10 06:21:44,700 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 06:22:11] 2026-01-10 06:21:44,700 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 06:22:11] 2026-01-10 06:21:44,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 06:22:11] 2026-01-10 06:21:44,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 06:22:11] 2026-01-10 06:21:44,974 | INFO     | all payload control threads have been joined
[2026-01-10 06:22:11] 2026-01-10 06:21:45,194 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 06:22:11] 2026-01-10 06:21:45,194 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 06:22:11] 2026-01-10 06:21:45,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 06:22:11] 2026-01-10 06:21:45,194 | INFO     | will abort loop
[2026-01-10 06:22:11] 2026-01-10 06:21:45,703 | INFO     | [job] retrieve thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:45,705 | INFO     | [job] queue monitor thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:45,742 | INFO     | all data control threads have been joined
[2026-01-10 06:22:11] 2026-01-10 06:21:45,918 | INFO     | [payload] validate_post thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:45,979 | INFO     | [payload] control thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,057 | INFO     | [data] copytool_in thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,199 | INFO     | [job] job monitor thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,362 | INFO     | all job control threads have been joined
[2026-01-10 06:22:11] 2026-01-10 06:21:46,571 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,705 | INFO     | [data] copytool_out thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,743 | INFO     | [data] control thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,859 | INFO     | [job] validate thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,913 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:46,937 | INFO     | [payload] failed_post thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:47,012 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:47,367 | INFO     | [job] control thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:48,705 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:21:55,372 | INFO     | job.realtimelogging is not enabled
[2026-01-10 06:22:11] 2026-01-10 06:21:56,373 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 06:22:11] 2026-01-10 06:22:04,583 | INFO     | [monitor] cgroup control has ended
[2026-01-10 06:22:11] 2026-01-10 06:22:06,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135156354004800)>', '<ExcThread(monitor, started 135156002170624)>']
[2026-01-10 06:22:11] 2026-01-10 06:22:06,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 06:22:11] 2026-01-10 06:22:06,812 | INFO     | [monitor] control thread has ended
[2026-01-10 06:22:11] 2026-01-10 06:22:11,599 | INFO     | all workflow threads have been joined
[2026-01-10 06:22:11] 2026-01-10 06:22:11,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 06:22:11] 2026-01-10 06:22:11,599 | INFO     | traces error code: 0
[2026-01-10 06:22:11] 2026-01-10 06:22:11,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 06:22:11] 2026-01-10 06:22:11,650 [wrapper] ==== pilot stdout END ====
[2026-01-10 06:22:11] 2026-01-10 06:22:11,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 06:22:11] 2026-01-10 06:22:11,656 [wrapper] pilotpid: 550257
[2026-01-10 06:22:11] 2026-01-10 06:22:11,657 [wrapper] Pilot exit status: 0
[2026-01-10 06:22:11] 2026-01-10 06:22:11,661 [wrapper] pandaids: 6964539293
[2026-01-10 06:22:11] 2026-01-10 06:22:11,673 [wrapper] cleanup supervisor_pilot  568173 550258
[2026-01-10 06:22:11] 2026-01-10 06:22:11,674 [wrapper] Test setup, not cleaning
[2026-01-10 06:22:11] 2026-01-10 06:22:11,675 [wrapper] apfmon messages muted
[2026-01-10 06:22:11] 2026-01-10 06:22:11,676 [wrapper] ==== wrapper stdout END ====
[2026-01-10 06:22:11] 2026-01-10 06:22:11,677 [wrapper] ==== wrapper stderr END ====
[2026-01-10 06:22:11]  *** Error codes and diagnostics ***
[2026-01-10 06:22:11]     "exeErrorCode": 0,
[2026-01-10 06:22:11]     "exeErrorDiag": "",
[2026-01-10 06:22:11]     "pilotErrorCode": 0,
[2026-01-10 06:22:11]     "pilotErrorDiag": "",
[2026-01-10 06:22:11]  *** Listing of results directory ***
[2026-01-10 06:22:11] total 430680
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc    579449 Jan  9 15:55 pilot3.tar.gz
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc      5112 Jan  9 15:59 queuedata.json
[2026-01-10 06:22:11] -rwx------ 1 boinc boinc     36322 Jan  9 16:00 runpilot2-wrapper.sh
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc       100 Jan 10 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 06:22:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 05:59 run_atlas
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc       105 Jan 10 05:59 job.xml
[2026-01-10 06:22:11] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:59 start_atlas.sh
[2026-01-10 06:22:11] drwxrwx--x 2 boinc boinc      4096 Jan 10 05:59 shared
[2026-01-10 06:22:11] -rw-r--r-- 2 boinc boinc    592612 Jan 10 05:59 input.tar.gz
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc      6943 Jan 10 05:59 init_data.xml
[2026-01-10 06:22:11] -rw-r--r-- 2 boinc boinc 392114188 Jan 10 05:59 EVNT.47962006._000037.pool.root.1
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc         0 Jan 10 05:59 boinc_lockfile
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc      2889 Jan 10 05:59 pandaJob.out
[2026-01-10 06:22:11] -rw------- 1 boinc boinc    989374 Jan 10 06:00 agis_schedconf.cvmfs.json
[2026-01-10 06:22:11] -rw------- 1 boinc boinc   1516240 Jan 10 06:00 agis_ddmendpoints.agis.ALL.json
[2026-01-10 06:22:11] drwx------ 5 boinc boinc      4096 Jan 10 06:00 pilot3
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc       527 Jan 10 06:17 boinc_task_state.xml
[2026-01-10 06:22:11] -rw------- 1 boinc boinc        95 Jan 10 06:21 pilot_heartbeat.json
[2026-01-10 06:22:11] -rw------- 1 boinc boinc  41459290 Jan 10 06:21 HITS.47962010._001857.pool.root.1
[2026-01-10 06:22:11] -rw------- 1 boinc boinc      1020 Jan 10 06:21 memory_monitor_summary.json
[2026-01-10 06:22:11] -rw------- 1 boinc boinc   1525151 Jan 10 06:21 log.47962010._001857.job.log.tgz.1
[2026-01-10 06:22:11] -rw------- 1 boinc boinc      8502 Jan 10 06:21 heartbeat.json
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc        26 Jan 10 06:22 wrapper_checkpoint.txt
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc      8192 Jan 10 06:22 boinc_mmap_file
[2026-01-10 06:22:11] -rw------- 1 boinc boinc      4879 Jan 10 06:22 pilotlog.txt
[2026-01-10 06:22:11] -rw------- 1 boinc boinc    239168 Jan 10 06:22 log.47962010._001857.job.log.1
[2026-01-10 06:22:11] -rw------- 1 boinc boinc       353 Jan 10 06:22 output.list
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc       620 Jan 10 06:22 runtime_log
[2026-01-10 06:22:11] -rw------- 1 boinc boinc   1781760 Jan 10 06:22 result.tar.gz
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc      8890 Jan 10 06:22 runtime_log.err
[2026-01-10 06:22:11] -rw------- 1 boinc boinc       641 Jan 10 06:22 9PqLDmI5Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAfmKDm9wT1fm.diag
[2026-01-10 06:22:11] -rw-r--r-- 1 boinc boinc     21938 Jan 10 06:22 stderr.txt
[2026-01-10 06:22:11] HITS file was successfully produced:
[2026-01-10 06:22:11] -rw------- 1 boinc boinc 41459290 Jan 10 06:21 shared/HITS.pool.root.1
[2026-01-10 06:22:11]  *** Contents of shared directory: ***
[2026-01-10 06:22:11] total 425756
[2026-01-10 06:22:11] -rw-r--r-- 2 boinc boinc     15847 Jan 10 05:59 start_atlas.sh
[2026-01-10 06:22:11] -rw-r--r-- 2 boinc boinc    592612 Jan 10 05:59 input.tar.gz
[2026-01-10 06:22:11] -rw-r--r-- 2 boinc boinc 392114188 Jan 10 05:59 ATLAS.root_0
[2026-01-10 06:22:11] -rw------- 1 boinc boinc  41459290 Jan 10 06:21 HITS.pool.root.1
[2026-01-10 06:22:11] -rw------- 1 boinc boinc   1781760 Jan 10 06:22 result.tar.gz
06:22:13 (546396): run_atlas exited; CPU time 5539.369142
06:22:13 (546396): called boinc_finish(0)

</stderr_txt>
]]>

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