Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:05:38 (6990): wrapper (7.7.26015): starting
09:05:38 (6990): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:05:38] Arguments: --nthreads 8
[2026-01-10 09:05:38] Threads: 8
[2026-01-10 09:05:38] Checking for CVMFS
[2026-01-10 09:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:05:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:05:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:05:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:05:42] 2.11.2.0 10929 36574 99652 154972 0 60 20340724 25165824 96 130560 0 17345924 99.836 9510928 3057 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 09:05:42] CVMFS is ok
[2026-01-10 09:05:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:05:42] Checking for apptainer binary...
[2026-01-10 09:05:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:05:42] Running /usr/bin/apptainer --version
[2026-01-10 09:05:42] apptainer version 1.3.2-1.el7
[2026-01-10 09:05:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:06:01] cg-vwn424.simple-grid.lan
[2026-01-10 09:06:01] apptainer works
[2026-01-10 09:06:01] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:06:01] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:06:01] Starting ATLAS job with PandaID=6964539199
[2026-01-10 09:06:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:12:11]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:12:11] 2026-01-10 14:11:17,586 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 15:12:11] 2026-01-10 14:11:17,587 | INFO     | monitor loop #1512: job 0:6964539199 is in state 'finished'
[2026-01-10 15:12:11] 2026-01-10 14:11:17,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,589 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6964539199/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,590 | INFO     | extracted standard info from prmon json
[2026-01-10 15:12:11] 2026-01-10 14:11:17,590 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:12:11] 2026-01-10 14:11:17,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:12:11] 2026-01-10 14:11:17,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 15:12:11] 2026-01-10 14:11:17,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 15:12:11] 2026-01-10 14:11:17,598 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:12:11] 2026-01-10 14:11:17,599 | INFO     | sum of square deviations: 12844082682.5
[2026-01-10 15:12:11] 2026-01-10 14:11:17,602 | INFO     | sum of deviations: 116273034245.49995
[2026-01-10 15:12:11] 2026-01-10 14:11:17,603 | INFO     | mean x: 1768043705.5
[2026-01-10 15:12:11] 2026-01-10 14:11:17,603 | INFO     | mean y: 2470190.0375722544
[2026-01-10 15:12:11] 2026-01-10 14:11:17,603 | INFO     | intersect: -16003017426.235573
[2026-01-10 15:12:11] 2026-01-10 14:11:17,604 | INFO     | chi2: 8.494176250883495
[2026-01-10 15:12:11] 2026-01-10 14:11:17,604 | INFO     | sum of square deviations: 12295263090.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,608 | INFO     | sum of deviations: 138691298300.9999
[2026-01-10 15:12:11] 2026-01-10 14:11:17,609 | INFO     | mean x: 1768043553.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,609 | INFO     | mean y: 2476340.651026393
[2026-01-10 15:12:11] 2026-01-10 14:11:17,609 | INFO     | intersect: -19941160003.147022
[2026-01-10 15:12:11] 2026-01-10 14:11:17,609 | INFO     | chi2: 7.703251070465883
[2026-01-10 15:12:11] 2026-01-10 14:11:17,609 | INFO     | current chi2=7.703251070465883 (change=9.311381787437558 %)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,610 | INFO     | right removable region: 340
[2026-01-10 15:12:11] 2026-01-10 14:11:17,610 | INFO     | sum of square deviations: 12295263090.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,614 | INFO     | sum of deviations: -6743202117.000004
[2026-01-10 15:12:11] 2026-01-10 14:11:17,614 | INFO     | mean x: 1768043858.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,614 | INFO     | mean y: 2504357.7302052784
[2026-01-10 15:12:11] 2026-01-10 14:11:17,614 | INFO     | intersect: 972168609.64126
[2026-01-10 15:12:11] 2026-01-10 14:11:17,615 | INFO     | chi2: 3.5462453522645108
[2026-01-10 15:12:11] 2026-01-10 14:11:17,615 | INFO     | current chi2=3.5462453522645108 (change=58.25086214927953 %)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,615 | INFO     | sum of square deviations: 11762304260.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,619 | INFO     | sum of deviations: -90627975994.50002
[2026-01-10 15:12:11] 2026-01-10 14:11:17,619 | INFO     | mean x: 1768044010.5
[2026-01-10 15:12:11] 2026-01-10 14:11:17,619 | INFO     | mean y: 2528315.473214286
[2026-01-10 15:12:11] 2026-01-10 14:11:17,619 | INFO     | intersect: 13625220485.214243
[2026-01-10 15:12:11] 2026-01-10 14:11:17,620 | INFO     | chi2: 1.2298977455850477
[2026-01-10 15:12:11] 2026-01-10 14:11:17,620 | INFO     | current chi2=1.2298977455850477 (change=65.31831209028792 %)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,621 | INFO     | sum of square deviations: 11244973630.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,624 | INFO     | sum of deviations: -103011669290.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,624 | INFO     | mean x: 1768044163.0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,624 | INFO     | mean y: 2531947.163141994
[2026-01-10 15:12:11] 2026-01-10 14:11:17,625 | INFO     | intersect: 16199028853.405405
[2026-01-10 15:12:11] 2026-01-10 14:11:17,625 | INFO     | chi2: 1.1339430647062931
[2026-01-10 15:12:11] 2026-01-10 14:11:17,625 | INFO     | current chi2=1.1339430647062931 (change=7.801842163155611 %)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,625 | INFO     | left removable region: 30
[2026-01-10 15:12:11] 2026-01-10 14:11:17,626 | INFO     | sum of square deviations: 9237596457.5
[2026-01-10 15:12:11] 2026-01-10 14:11:17,629 | INFO     | sum of deviations: -55803493386.999985
[2026-01-10 15:12:11] 2026-01-10 14:11:17,630 | INFO     | mean x: 1768044437.5
[2026-01-10 15:12:11] 2026-01-10 14:11:17,630 | INFO     | mean y: 2531998.664516129
[2026-01-10 15:12:11] 2026-01-10 14:11:17,630 | INFO     | intersect: 10683130196.46183
[2026-01-10 15:12:11] 2026-01-10 14:11:17,630 | INFO     | chi2: 0.22138626052200086
[2026-01-10 15:12:11] 2026-01-10 14:11:17,631 | INFO     | current memory leak: -6.04 B/s (using 310 data points, chi2=0.22)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,631 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | ..............................
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . Timing measurements:
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . get job = 0 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . initial setup = 18 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . payload setup = 167 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . stage-in = 0 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . payload execution = 21255 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,632 | INFO     | . stage-out = 1 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,633 | INFO     | . log creation = 0 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,633 | INFO     | ..............................
[2026-01-10 15:12:11] 2026-01-10 14:11:17,751 | INFO     | 
[2026-01-10 15:12:11] 2026-01-10 14:11:17,751 | INFO     | job summary report
[2026-01-10 15:12:11] 2026-01-10 14:11:17,751 | INFO     | --------------------------------------------------
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | PanDA job id: 6964539199
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | task id: 47898826
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | errors: (none)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | pilot state: finished 
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | transexitcode: 0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | exeerrorcode: 0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | exeerrordiag: 
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | exitcode: 0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,752 | INFO     | exitmsg: OK
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | cpuconsumptiontime: 80493 s
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | nevents: 400
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | neventsw: 0
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | pid: 17206
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | pgrp: 17206
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | corecount: 8
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | event service: False
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | sizes: {0: 2283749, 1: 2283948, 12: 2283948, 22: 2283976, 33: 2284004, 44: 2284060, 55: 2284216, 65: 2284244, 76: 2284272, 87: 2284328, 98: 2284356, 107: 2284926, 
[2026-01-10 15:12:11] 2026-01-10 14:11:17,753 | INFO     | --------------------------------------------------
[2026-01-10 15:12:11] 2026-01-10 14:11:17,754 | INFO     | 
[2026-01-10 15:12:11] 2026-01-10 14:11:17,754 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-10 15:12:11] 2026-01-10 14:11:17,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,797 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,798 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:12:11] 2026-01-10 14:11:17,798 | INFO     | job 6964539199 has completed (purged errors)
[2026-01-10 15:12:11] 2026-01-10 14:11:17,798 | INFO     | overall cleanup function is called
[2026-01-10 15:12:11] 2026-01-10 14:11:18,806 | INFO     | --- collectZombieJob: --- 10, [17206]
[2026-01-10 15:12:11] 2026-01-10 14:11:18,807 | INFO     | zombie collector waiting for pid 17206
[2026-01-10 15:12:11] 2026-01-10 14:11:18,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:12:11] 2026-01-10 14:11:18,807 | INFO     | collected zombie processes
[2026-01-10 15:12:11] 2026-01-10 14:11:18,807 | INFO     | will attempt to kill all subprocesses of pid=17206
[2026-01-10 15:12:11] 2026-01-10 14:11:18,880 | INFO     | process IDs to be killed: [17206] (in reverse order)
[2026-01-10 15:12:11] 2026-01-10 14:11:19,016 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:12:11] 2026-01-10 14:11:19,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:12:11] 2026-01-10 14:11:19,018 | INFO     | did not find any defunct processes belonging to 17206
[2026-01-10 15:12:11] 2026-01-10 14:11:19,021 | INFO     | did not find any defunct processes belonging to 17206
[2026-01-10 15:12:11] 2026-01-10 14:11:19,022 | INFO     | ready for new job
[2026-01-10 15:12:11] 2026-01-10 14:11:19,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:12:11] 2026-01-10 14:11:19,024 | INFO     | ***************************************
[2026-01-10 15:12:11] 2026-01-10 14:11:19,024 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:12:11] 2026-01-10 14:11:19,024 | INFO     | ***************************************
[2026-01-10 15:12:11] 2026-01-10 14:11:19,025 | INFO     | 
[2026-01-10 15:12:11] 2026-01-10 14:11:19,025 | INFO     | pilot is running in a VM
[2026-01-10 15:12:11] 2026-01-10 14:11:19,025 | INFO     | architecture information:
[2026-01-10 15:12:11] 2026-01-10 14:11:19,026 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:12:11] 2026-01-10 14:11:19,046 | INFO     | cat /etc/os-release:
[2026-01-10 15:12:11] NAME="CentOS Linux"
[2026-01-10 15:12:11] VERSION="7 (Core)"
[2026-01-10 15:12:11] ID="centos"
[2026-01-10 15:12:11] ID_LIKE="rhel fedora"
[2026-01-10 15:12:11] VERSION_ID="7"
[2026-01-10 15:12:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:12:11] ANSI_COLOR="0;31"
[2026-01-10 15:12:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:12:11] HOME_URL="https://www.centos.org/"
[2026-01-10 15:12:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:12:11] 
[2026-01-10 15:12:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:12:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:12:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:12:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:12:11] 
[2026-01-10 15:12:11] 2026-01-10 14:11:19,047 | INFO     | ***************************************
[2026-01-10 15:12:11] 2026-01-10 14:11:19,550 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-10 15:12:11] 2026-01-10 14:11:19,576 | INFO     | sufficient remaining disk space (498213060608 B)
[2026-01-10 15:12:11] 2026-01-10 14:11:19,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:12:11] 2026-01-10 14:11:19,577 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:12:11] 2026-01-10 14:11:19,577 | INFO     | update_server=False
[2026-01-10 15:12:11] 2026-01-10 14:11:19,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:12:11] 2026-01-10 14:11:19,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:12:11] 2026-01-10 14:11:19,578 | INFO     | aborting loop
[2026-01-10 15:12:11] 2026-01-10 14:11:19,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:12:11] 2026-01-10 14:11:19,751 | INFO     | all data control threads have been joined
[2026-01-10 15:12:11] 2026-01-10 14:11:20,227 | INFO     | all job control threads have been joined
[2026-01-10 15:12:11] 2026-01-10 14:11:20,444 | INFO     | all payload control threads have been joined
[2026-01-10 15:12:11] 2026-01-10 14:11:20,583 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:20,585 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:20,584 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:20,756 | INFO     | [data] control thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:20,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:12:11] 2026-01-10 14:11:21,064 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,078 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,233 | INFO     | [job] control thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,350 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,356 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,449 | INFO     | [payload] control thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,462 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:12:11] 2026-01-10 14:11:21,864 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:21,904 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:22,084 | INFO     | [job] validate thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:22,825 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:25,806 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:12:11] 2026-01-10 14:11:49,836 | INFO     | PID=10718 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 15:12:11] 2026-01-10 14:11:49,836 | INFO     | .. there are 2 such processes running
[2026-01-10 15:12:11] 2026-01-10 14:11:49,837 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:12:11] 2026-01-10 14:11:49,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:12:11] 2026-01-10 14:11:49,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:12:11] 2026-01-10 14:12:05,166 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:12:11] 2026-01-10 14:12:06,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491775334208)>', '<ExcThread(monitor, started 140491064604416)>']
[2026-01-10 15:12:11] 2026-01-10 14:12:06,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:12:11] 2026-01-10 14:12:06,914 | INFO     | [monitor] control thread has ended
[2026-01-10 15:12:11] 2026-01-10 14:12:11,141 | INFO     | all workflow threads have been joined
[2026-01-10 15:12:11] 2026-01-10 14:12:11,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:12:11] 2026-01-10 14:12:11,142 | INFO     | traces error code: 0
[2026-01-10 15:12:11] 2026-01-10 14:12:11,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:12:11] 2026-01-10 14:12:11,300 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:12:11] 2026-01-10 14:12:11,311 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:12:11] 2026-01-10 14:12:11,321 [wrapper] pilotpid: 10718
[2026-01-10 15:12:11] 2026-01-10 14:12:11,334 [wrapper] Pilot exit status: 0
[2026-01-10 15:12:11] 2026-01-10 14:12:11,388 [wrapper] pandaids: 6964539199
[2026-01-10 15:12:11] 2026-01-10 14:12:11,477 [wrapper] cleanup supervisor_pilot 24319 10719
[2026-01-10 15:12:11] 2026-01-10 14:12:11,482 [wrapper] Test setup, not cleaning
[2026-01-10 15:12:11] 2026-01-10 14:12:11,487 [wrapper] apfmon messages muted
[2026-01-10 15:12:11] 2026-01-10 14:12:11,492 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:12:11] 2026-01-10 14:12:11,495 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:12:11]  *** Error codes and diagnostics ***
[2026-01-10 15:12:11]     "exeErrorCode": 0,
[2026-01-10 15:12:11]     "exeErrorDiag": "",
[2026-01-10 15:12:11]     "pilotErrorCode": 0,
[2026-01-10 15:12:11]     "pilotErrorDiag": "",
[2026-01-10 15:12:11]  *** Listing of results directory ***
[2026-01-10 15:12:11] total 448952
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:59 queuedata.json
[2026-01-10 15:12:11] -rwx------. 1 boinc boinc     36322 Jan  9 16:59 runpilot2-wrapper.sh
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc       100 Jan 10 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:12:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 09:05 run_atlas
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc       105 Jan 10 09:05 job.xml
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc      6390 Jan 10 09:05 init_data.xml
[2026-01-10 15:12:11] -rw-r--r--. 2 boinc boinc 227358522 Jan 10 09:05 EVNT.47898824._001295.pool.root.1
[2026-01-10 15:12:11] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:05 start_atlas.sh
[2026-01-10 15:12:11] drwxrwx--x. 2 boinc boinc        68 Jan 10 09:05 shared
[2026-01-10 15:12:11] -rw-r--r--. 2 boinc boinc    592403 Jan 10 09:05 input.tar.gz
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc         0 Jan 10 09:05 boinc_lockfile
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc      2519 Jan 10 09:06 pandaJob.out
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc    989374 Jan 10 09:10 agis_schedconf.cvmfs.json
[2026-01-10 15:12:11] drwx------. 5 boinc boinc      4096 Jan 10 09:10 pilot3
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc 221627563 Jan 10 15:10 HITS.47898826._040083.pool.root.1
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc       531 Jan 10 15:10 boinc_task_state.xml
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc      1018 Jan 10 15:11 memory_monitor_summary.json
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc   1516240 Jan 10 15:11 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc    544743 Jan 10 15:11 log.47898826._040083.job.log.tgz.1
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc      7780 Jan 10 15:11 heartbeat.json
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc        95 Jan 10 15:11 pilot_heartbeat.json
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc      8192 Jan 10 15:12 boinc_mmap_file
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc        28 Jan 10 15:12 wrapper_checkpoint.txt
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc      4884 Jan 10 15:12 pilotlog.txt
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc   2873719 Jan 10 15:12 log.47898826._040083.job.log.1
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc       357 Jan 10 15:12 output.list
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc       620 Jan 10 15:12 runtime_log
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc   3440640 Jan 10 15:12 result.tar.gz
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc      8817 Jan 10 15:12 runtime_log.err
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc       657 Jan 10 15:12 7fVLDmK4Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5emKDm8kBvin.diag
[2026-01-10 15:12:11] -rw-r--r--. 1 boinc boinc     20820 Jan 10 15:12 stderr.txt
[2026-01-10 15:12:11] HITS file was successfully produced:
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc 221627563 Jan 10 15:10 shared/HITS.pool.root.1
[2026-01-10 15:12:11]  *** Contents of shared directory: ***
[2026-01-10 15:12:11] total 442424
[2026-01-10 15:12:11] -rw-r--r--. 2 boinc boinc 227358522 Jan 10 09:05 ATLAS.root_0
[2026-01-10 15:12:11] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:05 start_atlas.sh
[2026-01-10 15:12:11] -rw-r--r--. 2 boinc boinc    592403 Jan 10 09:05 input.tar.gz
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc 221627563 Jan 10 15:10 HITS.pool.root.1
[2026-01-10 15:12:11] -rw-------. 1 boinc boinc   3440640 Jan 10 15:12 result.tar.gz
15:12:13 (6990): run_atlas exited; CPU time 80707.738674
15:12:13 (6990): called boinc_finish(0)

</stderr_txt>
]]>

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