Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:07 (2749972): wrapper (7.7.26015): starting
18:49:07 (2749972): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:49:07] Arguments: --nthreads 8
[2026-01-09 18:49:07] Threads: 8
[2026-01-09 18:49:07] Checking for CVMFS
[2026-01-09 18:49:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:49:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:49:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:49:07] 2.13.3.0 7542 23558 174692 154961 0 693 29779391 40960000 22805 16776704 0 38571754 99.787 24168182 44779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:49:07] CVMFS is ok
[2026-01-09 18:49:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:49:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:49:07] Further information can be found at the LHC@home message board.
[2026-01-09 18:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:49:07] Checking for apptainer binary...
[2026-01-09 18:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:49:07] Running /usr/bin/apptainer --version
[2026-01-09 18:49:08] apptainer version 1.4.5-2.el9
[2026-01-09 18:49:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:49:08] c-212-6.aglt2.org
[2026-01-09 18:49:08] apptainer works
[2026-01-09 18:49:08] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:49:08] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:49:08] Starting ATLAS job with PandaID=6964539291
[2026-01-09 18:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:50:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:50:42] 2026-01-10 00:49:39,964 | INFO     | preparing for final server update for job 6964539291 in state='finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:40,142 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-09 19:50:42] 2026-01-10 00:49:40,157 | INFO     | this job has now completed (state=finished)
[2026-01-09 19:50:42] 2026-01-10 00:49:40,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 19:50:42] 2026-01-10 00:49:40,158 | INFO     | log transfer has been attempted: DONE
[2026-01-09 19:50:42] 2026-01-10 00:49:40,158 | INFO     | job 6964539291 has finished - writing final server update
[2026-01-09 19:50:42] 2026-01-10 00:49:40,158 | INFO     | total number of processed events: 50 (read)
[2026-01-09 19:50:42] 2026-01-10 00:49:40,167 | INFO     | executing command: lscpu
[2026-01-09 19:50:42] 2026-01-10 00:49:40,616 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:50:42] 2026-01-10 00:49:40,951 | INFO     | time since job start (3611s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:41,435 | INFO     | monitor loop #228: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:41,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:42,959 | INFO     | time since job start (3613s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:43,940 | INFO     | monitor loop #229: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:43,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:44,969 | INFO     | time since job start (3615s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:46,445 | INFO     | monitor loop #230: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:46,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:47,005 | INFO     | time since job start (3618s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:48,950 | INFO     | monitor loop #231: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:48,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:49,012 | INFO     | time since job start (3620s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:51,019 | INFO     | time since job start (3622s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:51,455 | INFO     | monitor loop #232: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:51,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:53,051 | INFO     | time since job start (3624s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:53,960 | INFO     | monitor loop #233: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:53,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:55,058 | INFO     | time since job start (3626s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:56,465 | INFO     | monitor loop #234: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:56,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:57,065 | INFO     | time since job start (3628s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:49:58,973 | INFO     | monitor loop #235: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:49:58,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:49:59,074 | INFO     | time since job start (3630s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:50:01,494 | INFO     | monitor loop #236: job 0:6964539291 is in state 'finished'
[2026-01-09 19:50:42] 2026-01-10 00:50:01,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:50:42] 2026-01-10 00:50:01,798 | INFO     | PID=2753668 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:50:42] 2026-01-10 00:50:01,799 | INFO     | .. there are 17 such processes running
[2026-01-09 19:50:42] 2026-01-10 00:50:02,800 | INFO     | time since job start (3633s) is within the limit (349056.0s)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,199 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:50:42] 2026-01-10 00:50:03,225 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3162.2387812499987
[2026-01-09 19:50:42] 2026-01-10 00:50:03,291 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539291/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,292 | INFO     | extracted standard info from prmon json
[2026-01-09 19:50:42] 2026-01-10 00:50:03,292 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:50:42] 2026-01-10 00:50:03,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:50:42] 2026-01-10 00:50:03,304 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:50:42] 2026-01-10 00:50:03,304 | INFO     | sum of square deviations: 43489636.230769195
[2026-01-09 19:50:42] 2026-01-10 00:50:03,304 | INFO     | sum of deviations: -38050962698.730774
[2026-01-09 19:50:42] 2026-01-10 00:50:03,304 | INFO     | mean x: 1768004478.7307692
[2026-01-09 19:50:42] 2026-01-10 00:50:03,304 | INFO     | mean y: 2010959.5192307692
[2026-01-09 19:50:42] 2026-01-10 00:50:03,304 | INFO     | intersect: 1546905556309.859
[2026-01-09 19:50:42] 2026-01-10 00:50:03,305 | INFO     | chi2: 5.925412367020488
[2026-01-09 19:50:42] 2026-01-10 00:50:03,327 | INFO     | current memory leak: -874.94 B/s (using 52 data points, chi2=5.93)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | could have reported an average CPU frequency of 3181 MHz (5 samples)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | ..............................
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . Timing measurements:
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . get job = 0 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . initial setup = 3 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . payload setup = 14 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . stage-in = 0 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . payload execution = 3556 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . stage-out = 4 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | . log creation = 2 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,328 | INFO     | ..............................
[2026-01-09 19:50:42] 2026-01-10 00:50:03,694 | INFO     | 
[2026-01-09 19:50:42] 2026-01-10 00:50:03,694 | INFO     | job summary report
[2026-01-09 19:50:42] 2026-01-10 00:50:03,694 | INFO     | --------------------------------------------------
[2026-01-09 19:50:42] 2026-01-10 00:50:03,695 | INFO     | PanDA job id: 6964539291
[2026-01-09 19:50:42] 2026-01-10 00:50:03,695 | INFO     | task id: 47962010
[2026-01-09 19:50:42] 2026-01-10 00:50:03,699 | INFO     | errors: (none)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,699 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:50:42] 2026-01-10 00:50:03,699 | INFO     | pilot state: finished 
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | transexitcode: 0
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | exeerrorcode: 0
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | exeerrordiag: 
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | exitcode: 0
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | exitmsg: OK
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | cpuconsumptiontime: 10662 s
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | nevents: 50
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | neventsw: 0
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | pid: 2762945
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | pgrp: 2762945
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | corecount: 8
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | event service: False
[2026-01-09 19:50:42] 2026-01-10 00:50:03,700 | INFO     | sizes: {0: 2284567, 11: 2284857, 3575: 2311304, 3576: 2311303, 3581: 2320353, 3584: 2320409, 3611: 2320815}
[2026-01-09 19:50:42] 2026-01-10 00:50:03,701 | INFO     | --------------------------------------------------
[2026-01-09 19:50:42] 2026-01-10 00:50:03,701 | INFO     | 
[2026-01-09 19:50:42] 2026-01-10 00:50:03,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:50:42] 2026-01-10 00:50:03,826 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | job 6964539291 has completed (purged errors)
[2026-01-09 19:50:42] 2026-01-10 00:50:03,828 | INFO     | overall cleanup function is called
[2026-01-09 19:50:42] 2026-01-10 00:50:04,896 | INFO     | --- collectZombieJob: --- 10, [2762945]
[2026-01-09 19:50:42] 2026-01-10 00:50:04,896 | INFO     | zombie collector waiting for pid 2762945
[2026-01-09 19:50:42] 2026-01-10 00:50:04,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:50:42] 2026-01-10 00:50:04,896 | INFO     | collected zombie processes
[2026-01-09 19:50:42] 2026-01-10 00:50:04,896 | INFO     | will attempt to kill all subprocesses of pid=2762945
[2026-01-09 19:50:42] 2026-01-10 00:50:05,955 | INFO     | process IDs to be killed: [2762945] (in reverse order)
[2026-01-09 19:50:42] 2026-01-10 00:50:06,333 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:50:42] 2026-01-10 00:50:06,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:50:42] 2026-01-10 00:50:06,476 | INFO     | did not find any defunct processes belonging to 2762945
[2026-01-09 19:50:42] 2026-01-10 00:50:06,672 | INFO     | did not find any defunct processes belonging to 2762945
[2026-01-09 19:50:42] 2026-01-10 00:50:06,672 | INFO     | ready for new job
[2026-01-09 19:50:42] 2026-01-10 00:50:06,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:50:42] 2026-01-10 00:50:06,674 | INFO     | ***************************************
[2026-01-09 19:50:42] 2026-01-10 00:50:06,706 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:50:42] 2026-01-10 00:50:06,706 | INFO     | ***************************************
[2026-01-09 19:50:42] 2026-01-10 00:50:06,706 | INFO     | 
[2026-01-09 19:50:42] 2026-01-10 00:50:06,762 | INFO     | architecture information:
[2026-01-09 19:50:42] 2026-01-10 00:50:06,775 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:50:42] 2026-01-10 00:50:06,877 | INFO     | cat /etc/os-release:
[2026-01-09 19:50:42] NAME="CentOS Linux"
[2026-01-09 19:50:42] VERSION="7 (Core)"
[2026-01-09 19:50:42] ID="centos"
[2026-01-09 19:50:42] ID_LIKE="rhel fedora"
[2026-01-09 19:50:42] VERSION_ID="7"
[2026-01-09 19:50:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:50:42] ANSI_COLOR="0;31"
[2026-01-09 19:50:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:50:42] HOME_URL="https://www.centos.org/"
[2026-01-09 19:50:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:50:42] 
[2026-01-09 19:50:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:50:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:50:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:50:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:50:42] 
[2026-01-09 19:50:42] 2026-01-10 00:50:06,877 | INFO     | ***************************************
[2026-01-09 19:50:42] 2026-01-10 00:50:07,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:50:42] 2026-01-10 00:50:07,500 | INFO     | sufficient remaining disk space (126938513408 B)
[2026-01-09 19:50:42] 2026-01-10 00:50:07,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:50:42] 2026-01-10 00:50:07,500 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:50:42] 2026-01-10 00:50:07,500 | INFO     | update_server=False
[2026-01-09 19:50:42] 2026-01-10 00:50:07,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:50:42] 2026-01-10 00:50:07,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:50:42] 2026-01-10 00:50:07,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:42] 2026-01-10 00:50:07,554 | INFO     | aborting loop
[2026-01-09 19:50:42] 2026-01-10 00:50:07,612 | INFO     | all payload control threads have been joined
[2026-01-09 19:50:42] 2026-01-10 00:50:07,915 | INFO     | all job control threads have been joined
[2026-01-09 19:50:42] 2026-01-10 00:50:08,317 | INFO     | all data control threads have been joined
[2026-01-09 19:50:42] 2026-01-10 00:50:08,506 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:08,560 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:08,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:08,617 | INFO     | [payload] control thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:08,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:50:42] 2026-01-10 00:50:08,779 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:08,921 | INFO     | [job] control thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,205 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,210 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,214 | INFO     | [job] validate thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,219 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,267 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,323 | INFO     | [data] control thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,416 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,521 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:09,770 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:10,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:50:42] 2026-01-10 00:50:14,321 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:50:42] 2026-01-10 00:50:35,253 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:50:42] 2026-01-10 00:50:36,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652906067776)>', '<ExcThread(monitor, started 140652562069248)>']
[2026-01-09 19:50:42] 2026-01-10 00:50:38,946 | INFO     | PID=2753668 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 19:50:42] 2026-01-10 00:50:38,946 | INFO     | .. there are 17 such processes running
[2026-01-09 19:50:42] 2026-01-10 00:50:38,947 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:50:42] 2026-01-10 00:50:38,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:50:42] 2026-01-10 00:50:38,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:50:42] 2026-01-10 00:50:38,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:50:42] 2026-01-10 00:50:38,947 | INFO     | [monitor] control thread has ended
[2026-01-09 19:50:42] 2026-01-10 00:50:41,449 | INFO     | all workflow threads have been joined
[2026-01-09 19:50:42] 2026-01-10 00:50:41,449 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:50:42] 2026-01-10 00:50:41,450 | INFO     | traces error code: 0
[2026-01-09 19:50:42] 2026-01-10 00:50:41,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:50:42] 2026-01-10 00:50:42,053 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:50:42] 2026-01-10 00:50:42,056 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:50:42] 2026-01-10 00:50:42,058 [wrapper] pilotpid: 2753668
[2026-01-09 19:50:42] 2026-01-10 00:50:42,060 [wrapper] Pilot exit status: 0
[2026-01-09 19:50:42] 2026-01-10 00:50:42,072 [wrapper] pandaids: 6964539291
[2026-01-09 19:50:42] 2026-01-10 00:50:42,214 [wrapper] cleanup supervisor_pilot 2871473 2753669
[2026-01-09 19:50:42] 2026-01-10 00:50:42,244 [wrapper] Test setup, not cleaning
[2026-01-09 19:50:42] 2026-01-10 00:50:42,271 [wrapper] apfmon messages muted
[2026-01-09 19:50:42] 2026-01-10 00:50:42,326 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:50:42] 2026-01-10 00:50:42,366 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:50:42]  *** Error codes and diagnostics ***
[2026-01-09 19:50:42]     "exeErrorCode": 0,
[2026-01-09 19:50:42]     "exeErrorDiag": "",
[2026-01-09 19:50:42]     "pilotErrorCode": 0,
[2026-01-09 19:50:42]     "pilotErrorDiag": "",
[2026-01-09 19:50:42]  *** Listing of results directory ***
[2026-01-09 19:50:42] total 431284
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 19:50:42] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:50:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:49 run_atlas
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:49 job.xml
[2026-01-09 19:50:42] -rw-r--r--. 2 boincer umatlas 392114188 Jan  9 18:49 EVNT.47962006._000037.pool.root.1
[2026-01-09 19:50:42] -rw-r--r--. 2 boincer umatlas    592613 Jan  9 18:49 input.tar.gz
[2026-01-09 19:50:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:49 start_atlas.sh
[2026-01-09 19:50:42] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:49 shared
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:49 boinc_lockfile
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas      2889 Jan  9 18:49 pandaJob.out
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas        57 Jan  9 18:49 setup.sh.local
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas    989374 Jan  9 18:49 agis_schedconf.cvmfs.json
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:50:42] drwx------. 5 boincer umatlas      4096 Jan  9 18:49 pilot3
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas       528 Jan  9 19:25 boinc_task_state.xml
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas      6954 Jan  9 19:47 init_data.xml
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas  42227841 Jan  9 19:48 HITS.47962010._001855.pool.root.1
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas      1029 Jan  9 19:49 memory_monitor_summary.json
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas   1179951 Jan  9 19:49 log.47962010._001855.job.log.tgz.1
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas      8536 Jan  9 19:50 heartbeat.json
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas        26 Jan  9 19:50 wrapper_checkpoint.txt
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 19:50 boinc_mmap_file
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas        95 Jan  9 19:50 pilot_heartbeat.json
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas      4825 Jan  9 19:50 pilotlog.txt
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas    507936 Jan  9 19:50 log.47962010._001855.job.log.1
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas       353 Jan  9 19:50 output.list
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas       620 Jan  9 19:50 runtime_log
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas   1710080 Jan  9 19:50 result.tar.gz
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas       651 Jan  9 19:50 yUDNDmL2Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZemKDmi0Hv5n.diag
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas      9337 Jan  9 19:50 runtime_log.err
[2026-01-09 19:50:42] -rw-r--r--. 1 boincer umatlas      4130 Jan  9 19:50 stderr.txt
[2026-01-09 19:50:42] HITS file was successfully produced:
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas 42227841 Jan  9 19:48 shared/HITS.pool.root.1
[2026-01-09 19:50:42]  *** Contents of shared directory: ***
[2026-01-09 19:50:42] total 426444
[2026-01-09 19:50:42] -rw-r--r--. 2 boincer umatlas 392114188 Jan  9 18:49 ATLAS.root_0
[2026-01-09 19:50:42] -rw-r--r--. 2 boincer umatlas    592613 Jan  9 18:49 input.tar.gz
[2026-01-09 19:50:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:49 start_atlas.sh
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas  42227841 Jan  9 19:48 HITS.pool.root.1
[2026-01-09 19:50:42] -rw-------. 1 boincer umatlas   1710080 Jan  9 19:50 result.tar.gz
19:50:44 (2749972): run_atlas exited; CPU time 10704.253626
19:50:44 (2749972): called boinc_finish(0)

</stderr_txt>
]]>

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