Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:03 (2794634): wrapper (7.7.26015): starting
19:02:03 (2794634): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 19:02:03] Arguments: --nthreads 9
[2026-01-09 19:02:03] Threads: 9
[2026-01-09 19:02:03] Checking for CVMFS
[2026-01-09 19:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:02:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:02:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:02:05] 2.13.3.0 11338 93969 216576 154961 3 636 28835757 32935937 23801 16776704 0 508122760 99.483 707240020 38128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:02:05] CVMFS is ok
[2026-01-09 19:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:02:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:02:05] Further information can be found at the LHC@home message board.
[2026-01-09 19:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:02:05] Checking for apptainer binary...
[2026-01-09 19:02:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:02:05] Running /usr/bin/apptainer --version
[2026-01-09 19:02:05] apptainer version 1.4.5-2.el9
[2026-01-09 19:02:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:02:06] c7-3-17.aglt2.org
[2026-01-09 19:02:06] apptainer works
[2026-01-09 19:02:06] Set ATHENA_PROC_NUMBER=9
[2026-01-09 19:02:06] Set ATHENA_CORE_NUMBER=9
[2026-01-09 19:02:06] Starting ATLAS job with PandaID=6964539122
[2026-01-09 19:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:36:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:36:38] 2026-01-10 02:35:58,892 | INFO     | monitor loop #560: job 0:6964539122 is in state 'finished'
[2026-01-09 21:36:38] 2026-01-10 02:35:58,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:38] 2026-01-10 02:35:59,747 | INFO     | time since job start (9165s) is within the limit (349056.0s)
[2026-01-09 21:36:38] 2026-01-10 02:36:01,426 | INFO     | monitor loop #561: job 0:6964539122 is in state 'finished'
[2026-01-09 21:36:38] 2026-01-10 02:36:01,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:38] 2026-01-10 02:36:01,753 | INFO     | time since job start (9167s) is within the limit (349056.0s)
[2026-01-09 21:36:38] 2026-01-10 02:36:03,760 | INFO     | time since job start (9169s) is within the limit (349056.0s)
[2026-01-09 21:36:38] 2026-01-10 02:36:03,931 | INFO     | monitor loop #562: job 0:6964539122 is in state 'finished'
[2026-01-09 21:36:38] 2026-01-10 02:36:03,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,252 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:36:38] 2026-01-10 02:36:05,256 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3209.4844479166663
[2026-01-09 21:36:38] 2026-01-10 02:36:05,265 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539122/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,265 | INFO     | extracted standard info from prmon json
[2026-01-09 21:36:38] 2026-01-10 02:36:05,265 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:36:38] 2026-01-10 02:36:05,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:36:38] 2026-01-10 02:36:05,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:36:38] 2026-01-10 02:36:05,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:36:38] 2026-01-10 02:36:05,267 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:36:38] 2026-01-10 02:36:05,267 | INFO     | sum of square deviations: 1025685969.7583911
[2026-01-09 21:36:38] 2026-01-10 02:36:05,268 | INFO     | sum of deviations: 42095738702.01339
[2026-01-09 21:36:38] 2026-01-10 02:36:05,268 | INFO     | mean x: 1768008018.0402684
[2026-01-09 21:36:38] 2026-01-10 02:36:05,268 | INFO     | mean y: 2471160.66442953
[2026-01-09 21:36:38] 2026-01-10 02:36:05,268 | INFO     | intersect: -72559312606.36836
[2026-01-09 21:36:38] 2026-01-10 02:36:05,268 | INFO     | chi2: 4.0187516010731485
[2026-01-09 21:36:38] 2026-01-10 02:36:05,268 | INFO     | sum of square deviations: 925853369.7500001
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | sum of deviations: 49860198798.58337
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | mean x: 1768007865.5416667
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | mean y: 2482627.736111111
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | intersect: -95210459867.86638
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | chi2: 3.3597693371048685
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | current chi2=3.3597693371048685 (change=16.397685883156065 %)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | right removable region: 143
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | sum of square deviations: 925849709.7500001
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | sum of deviations: -1147630803.624999
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | mean x: 1768008170.5416667
[2026-01-09 21:36:38] 2026-01-10 02:36:05,269 | INFO     | mean y: 2536982.8541666665
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | intersect: 2194059663.2708163
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | chi2: 0.7590704559163077
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | current chi2=0.7590704559163077 (change=81.11178467179685 %)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | sum of square deviations: 832720154.8201407
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | sum of deviations: -5339104174.769786
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | mean x: 1768008323.0359712
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | mean y: 2543749.5539568346
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | intersect: 11338381562.423922
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | chi2: 0.7111466516180788
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | current chi2=0.7111466516180788 (change=6.313485648756807 %)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,270 | INFO     | left removable region: 20
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | sum of square deviations: 576989853.8699183
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | sum of deviations: 1255322958.3495932
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | mean x: 1768008445.0325203
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | mean y: 2563012.162601626
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | intersect: -3843989187.5328426
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | chi2: 0.0008847088681363442
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | current memory leak: 2.18 B/s (using 123 data points, chi2=0.00)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,271 | INFO     | could have reported an average CPU frequency of 3213 MHz (9 samples)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | ..............................
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . Timing measurements:
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . get job = 0 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . initial setup = 7 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . payload setup = 32 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . stage-in = 0 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . payload execution = 9059 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . stage-out = 2 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | . log creation = 0 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,272 | INFO     | ..............................
[2026-01-09 21:36:38] 2026-01-10 02:36:05,407 | INFO     | 
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | job summary report
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | --------------------------------------------------
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | PanDA job id: 6964539122
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | task id: 47898826
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | errors: (none)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | pilot state: finished 
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | transexitcode: 0
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | exeerrorcode: 0
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | exeerrordiag: 
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | exitcode: 0
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | exitmsg: OK
[2026-01-09 21:36:38] 2026-01-10 02:36:05,408 | INFO     | cpuconsumptiontime: 45285 s
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | nevents: 400
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | neventsw: 0
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | pid: 2816424
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | pgrp: 2816424
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | corecount: 9
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | event service: False
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | sizes: {0: 2283687, 1: 2283942, 2: 2283970, 13: 2283970, 24: 2284026, 28: 2284316, 34: 2284472, 9096: 2312690, 9097: 2312689, 9100: 2321743, 9101: 2321799, 9116: 2
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | --------------------------------------------------
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | 
[2026-01-09 21:36:38] 2026-01-10 02:36:05,409 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:36:38] 2026-01-10 02:36:05,432 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,432 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,434 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,434 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:36:38] 2026-01-10 02:36:05,434 | INFO     | job 6964539122 has completed (purged errors)
[2026-01-09 21:36:38] 2026-01-10 02:36:05,434 | INFO     | overall cleanup function is called
[2026-01-09 21:36:38] 2026-01-10 02:36:06,444 | INFO     | --- collectZombieJob: --- 10, [2816424]
[2026-01-09 21:36:38] 2026-01-10 02:36:06,445 | INFO     | zombie collector waiting for pid 2816424
[2026-01-09 21:36:38] 2026-01-10 02:36:06,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:36:38] 2026-01-10 02:36:06,445 | INFO     | collected zombie processes
[2026-01-09 21:36:38] 2026-01-10 02:36:06,445 | INFO     | will attempt to kill all subprocesses of pid=2816424
[2026-01-09 21:36:38] 2026-01-10 02:36:08,571 | INFO     | process IDs to be killed: [2816424] (in reverse order)
[2026-01-09 21:36:38] 2026-01-10 02:36:09,717 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:36:38] 2026-01-10 02:36:09,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:36:38] 2026-01-10 02:36:09,857 | INFO     | did not find any defunct processes belonging to 2816424
[2026-01-09 21:36:38] 2026-01-10 02:36:10,006 | INFO     | did not find any defunct processes belonging to 2816424
[2026-01-09 21:36:38] 2026-01-10 02:36:10,006 | INFO     | ready for new job
[2026-01-09 21:36:38] 2026-01-10 02:36:10,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:36:38] 2026-01-10 02:36:10,010 | INFO     | ***************************************
[2026-01-09 21:36:38] 2026-01-10 02:36:10,010 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:36:38] 2026-01-10 02:36:10,010 | INFO     | ***************************************
[2026-01-09 21:36:38] 2026-01-10 02:36:10,010 | INFO     | 
[2026-01-09 21:36:38] 2026-01-10 02:36:10,035 | INFO     | architecture information:
[2026-01-09 21:36:38] 2026-01-10 02:36:10,036 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:36:38] 2026-01-10 02:36:10,148 | INFO     | cat /etc/os-release:
[2026-01-09 21:36:38] NAME="CentOS Linux"
[2026-01-09 21:36:38] VERSION="7 (Core)"
[2026-01-09 21:36:38] ID="centos"
[2026-01-09 21:36:38] ID_LIKE="rhel fedora"
[2026-01-09 21:36:38] VERSION_ID="7"
[2026-01-09 21:36:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:36:38] ANSI_COLOR="0;31"
[2026-01-09 21:36:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:36:38] HOME_URL="https://www.centos.org/"
[2026-01-09 21:36:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:36:38] 
[2026-01-09 21:36:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:36:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:36:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:36:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:36:38] 
[2026-01-09 21:36:38] 2026-01-10 02:36:10,148 | INFO     | ***************************************
[2026-01-09 21:36:38] 2026-01-10 02:36:10,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:36:38] 2026-01-10 02:36:10,781 | INFO     | sufficient remaining disk space (73913073664 B)
[2026-01-09 21:36:38] 2026-01-10 02:36:10,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:36:38] 2026-01-10 02:36:10,781 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:36:38] 2026-01-10 02:36:10,781 | INFO     | update_server=False
[2026-01-09 21:36:38] 2026-01-10 02:36:10,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:36:38] 2026-01-10 02:36:10,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:36:38] 2026-01-10 02:36:10,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:36:38] 2026-01-10 02:36:10,787 | INFO     | aborting loop
[2026-01-09 21:36:38] 2026-01-10 02:36:10,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:36:38] 2026-01-10 02:36:10,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:36:38] 2026-01-10 02:36:10,841 | INFO     | all payload control threads have been joined
[2026-01-09 21:36:38] 2026-01-10 02:36:11,346 | INFO     | all job control threads have been joined
[2026-01-09 21:36:38] 2026-01-10 02:36:11,434 | INFO     | all data control threads have been joined
[2026-01-09 21:36:38] 2026-01-10 02:36:11,788 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:11,793 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:11,794 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:11,847 | INFO     | [payload] control thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:11,984 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,118 | INFO     | [job] validate thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,209 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,353 | INFO     | [job] control thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,440 | INFO     | [data] control thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,701 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,812 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,930 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,934 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:12,937 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:13,345 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:14,796 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:36:38] 2026-01-10 02:36:29,006 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:36:38] 2026-01-10 02:36:29,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452683994944)>', '<ExcThread(monitor, started 140452200179456)>']
[2026-01-09 21:36:38] 2026-01-10 02:36:34,830 | INFO     | all workflow threads have been joined
[2026-01-09 21:36:38] 2026-01-10 02:36:34,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:36:38] 2026-01-10 02:36:34,831 | INFO     | traces error code: 0
[2026-01-09 21:36:38] 2026-01-10 02:36:34,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:36:38] 2026-01-10 02:36:37,946 | INFO     | PID=2800345 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:36:38] 2026-01-10 02:36:37,947 | INFO     | .. there are 22 such processes running
[2026-01-09 21:36:38] 2026-01-10 02:36:37,966 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:36:38] 2026-01-10 02:36:37,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:36:38] 2026-01-10 02:36:37,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:36:38] 2026-01-10 02:36:37,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:36:38] 2026-01-10 02:36:37,967 | INFO     | [monitor] control thread has ended
[2026-01-09 21:36:38] 2026-01-10 02:36:38,159 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:36:38] 2026-01-10 02:36:38,166 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:36:38] 2026-01-10 02:36:38,186 [wrapper] pilotpid: 2800345
[2026-01-09 21:36:38] 2026-01-10 02:36:38,207 [wrapper] Pilot exit status: 0
[2026-01-09 21:36:38] 2026-01-10 02:36:38,266 [wrapper] pandaids: 6964539122
[2026-01-09 21:36:38] 2026-01-10 02:36:38,446 [wrapper] cleanup supervisor_pilot 3279764 2800346
[2026-01-09 21:36:38] 2026-01-10 02:36:38,449 [wrapper] Test setup, not cleaning
[2026-01-09 21:36:38] 2026-01-10 02:36:38,451 [wrapper] apfmon messages muted
[2026-01-09 21:36:38] 2026-01-10 02:36:38,464 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:36:38] 2026-01-10 02:36:38,493 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:36:38]  *** Error codes and diagnostics ***
[2026-01-09 21:36:38]     "exeErrorCode": 0,
[2026-01-09 21:36:38]     "exeErrorDiag": "",
[2026-01-09 21:36:38]     "pilotErrorCode": 0,
[2026-01-09 21:36:38]     "pilotErrorDiag": "",
[2026-01-09 21:36:38]  *** Listing of results directory ***
[2026-01-09 21:36:38] total 437120
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 21:36:38] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:36:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:02 run_atlas
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:02 job.xml
[2026-01-09 21:36:38] -rw-r--r--. 2 boincer umatlas 223270431 Jan  9 19:02 EVNT.47898824._001075.pool.root.1
[2026-01-09 21:36:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:02 start_atlas.sh
[2026-01-09 21:36:38] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:02 shared
[2026-01-09 21:36:38] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 19:02 input.tar.gz
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:02 boinc_lockfile
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 19:02 pandaJob.out
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas        57 Jan  9 19:02 setup.sh.local
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas    989374 Jan  9 19:03 agis_schedconf.cvmfs.json
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:36:38] drwx------. 5 boincer umatlas      4096 Jan  9 19:03 pilot3
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas 217326517 Jan  9 21:35 HITS.47898826._040006.pool.root.1
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:35 boinc_task_state.xml
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas      1043 Jan  9 21:35 memory_monitor_summary.json
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas    381654 Jan  9 21:35 log.47898826._040006.job.log.tgz.1
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas      7763 Jan  9 21:36 heartbeat.json
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 21:36 init_data.xml
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:36 boinc_mmap_file
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:36 wrapper_checkpoint.txt
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas        95 Jan  9 21:36 pilot_heartbeat.json
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas       823 Jan  9 21:36 pilotlog.txt
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas   1169652 Jan  9 21:36 log.47898826._040006.job.log.1
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas       357 Jan  9 21:36 output.list
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:36 runtime_log
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas   1566720 Jan  9 21:36 result.tar.gz
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas       651 Jan  9 21:36 uXmKDmQ1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIThKDmMHFOXn.diag
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas      9337 Jan  9 21:36 runtime_log.err
[2026-01-09 21:36:38] -rw-r--r--. 1 boincer umatlas     21454 Jan  9 21:36 stderr.txt
[2026-01-09 21:36:38] HITS file was successfully produced:
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas 217326517 Jan  9 21:35 shared/HITS.pool.root.1
[2026-01-09 21:36:38]  *** Contents of shared directory: ***
[2026-01-09 21:36:38] total 432408
[2026-01-09 21:36:38] -rw-r--r--. 2 boincer umatlas 223270431 Jan  9 19:02 ATLAS.root_0
[2026-01-09 21:36:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:02 start_atlas.sh
[2026-01-09 21:36:38] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 19:02 input.tar.gz
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas 217326517 Jan  9 21:35 HITS.pool.root.1
[2026-01-09 21:36:38] -rw-------. 1 boincer umatlas   1566720 Jan  9 21:36 result.tar.gz
21:36:40 (2794634): run_atlas exited; CPU time 45587.388195
21:36:40 (2794634): called boinc_finish(0)

</stderr_txt>
]]>

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