Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:13:38 (474311): wrapper (7.7.26015): starting
04:13:38 (474311): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 04:13:38] Arguments: --nthreads 12
[2026-01-10 04:13:38] Threads: 12
[2026-01-10 04:13:38] Checking for CVMFS
[2026-01-10 04:13:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 04:13:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 04:13:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 04:13:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 04:13:38] 2.13.3.0 2099 472 52932 154967 3 49 2819409 4096000 1042 130560 0 1403829 99.995 16384 562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 04:13:38] CVMFS is ok
[2026-01-10 04:13:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 04:13:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 04:13:38] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 04:13:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 04:13:38] Further information can be found at the LHC@home message board.
[2026-01-10 04:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 04:13:38] Checking for apptainer binary...
[2026-01-10 04:13:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 04:13:38] Running /usr/bin/apptainer --version
[2026-01-10 04:13:38] apptainer version 1.4.5
[2026-01-10 04:13:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 04:13:38] test-run
[2026-01-10 04:13:38] apptainer works
[2026-01-10 04:13:38] Set ATHENA_PROC_NUMBER=12
[2026-01-10 04:13:38] Set ATHENA_CORE_NUMBER=12
[2026-01-10 04:13:38] Starting ATLAS job with PandaID=6964539094
[2026-01-10 04:13:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:53:54]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:53:54]  storage_token=
[2026-01-10 04:53:54]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6964539094/log.47898826._039978.job.log.tgz.1
[2026-01-10 04:53:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/75/log.47898826._039978.job.log.tgz.1
[2026-01-10 04:53:54]  workdir=None
[2026-01-10 04:53:54] ]
[2026-01-10 04:53:54] 2026-01-10 04:52:44,013 | INFO     | transferring file log.47898826._039978.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539094/log.47898826._039978.job.log.tgz.1 to /var/lib/boinc
[2026-01-10 04:53:54] 2026-01-10 04:52:44,013 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539094/log.47898826._039978.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.478988
[2026-01-10 04:53:54] 2026-01-10 04:52:44,019 | INFO     | adding to output.list: log.47898826._039978.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/75/log.47898826._039978.job.log.tg
[2026-01-10 04:53:54] 2026-01-10 04:52:44,019 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 04:53:54] 2026-01-10 04:52:44,019 | INFO     | summary of transferred files:
[2026-01-10 04:53:54] 2026-01-10 04:52:44,019 | INFO     |  -- lfn=log.47898826._039978.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 04:53:54] 2026-01-10 04:52:44,019 | INFO     | stage-out finished correctly
[2026-01-10 04:53:54] 2026-01-10 04:52:44,590 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 04:53:54] 2026-01-10 04:52:44,658 | INFO     | time since job start (2339s) is within the limit (349056.0s)
[2026-01-10 04:53:54] 2026-01-10 04:52:46,664 | INFO     | time since job start (2341s) is within the limit (349056.0s)
[2026-01-10 04:53:54] 2026-01-10 04:52:46,962 | INFO     | job 6964539094 has state=finished
[2026-01-10 04:53:54] 2026-01-10 04:52:46,962 | INFO     | preparing for final server update for job 6964539094 in state='finished'
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | this job has now completed (state=finished)
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | log transfer has been attempted: DONE
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | job 6964539094 has finished - writing final server update
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | total number of processed events: 400 (read)
[2026-01-10 04:53:54] 2026-01-10 04:52:47,347 | INFO     | executing command: lscpu
[2026-01-10 04:53:54] 2026-01-10 04:52:47,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 04:53:54] 2026-01-10 04:52:47,574 | WARNING  | process 484830 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 04:53:54] 2026-01-10 04:52:47,574 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539094/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:53:54] 2026-01-10 04:52:47,589 | INFO     | number of running child processes to parent process 484830: 1
[2026-01-10 04:53:54] 2026-01-10 04:52:47,589 | INFO     | maximum number of monitored processes: 6
[2026-01-10 04:53:54] 2026-01-10 04:52:47,688 | INFO     | PID=478173 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:53:54] 2026-01-10 04:52:47,688 | INFO     | .. there are 2 such processes running
[2026-01-10 04:53:54] 2026-01-10 04:52:48,688 | INFO     | time since job start (2343s) is within the limit (349056.0s)
[2026-01-10 04:53:54] 2026-01-10 04:52:50,092 | INFO     | monitor loop #182: job 0:6964539094 is in state 'finished'
[2026-01-10 04:53:54] 2026-01-10 04:52:50,092 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:53:54] 2026-01-10 04:52:50,692 | INFO     | time since job start (2345s) is within the limit (349056.0s)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,594 | INFO     | monitor loop #183: job 0:6964539094 is in state 'finished'
[2026-01-10 04:53:54] 2026-01-10 04:52:52,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,666 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 04:53:54] 2026-01-10 04:52:52,666 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.975999999998
[2026-01-10 04:53:54] 2026-01-10 04:52:52,668 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539094/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,668 | INFO     | extracted standard info from prmon json
[2026-01-10 04:53:54] 2026-01-10 04:52:52,668 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:53:54] 2026-01-10 04:52:52,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | sum of square deviations: 9228080.0
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | sum of deviations: 891281003.9999999
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | mean x: 1768019664.0
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | mean y: 2843531.64516129
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | intersect: -170758825333.5643
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | chi2: 0.03224805599253525
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | current memory leak: 96.58 B/s (using 31 data points, chi2=0.03)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,669 | INFO     | could have reported an average CPU frequency of 4299 MHz (5 samples)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | ..............................
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . Timing measurements:
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . get job = 0 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . initial setup = 2 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . payload setup = 3 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . stage-in = 0 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . payload execution = 2318 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . stage-out = 0 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | . log creation = 0 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,670 | INFO     | ..............................
[2026-01-10 04:53:54] 2026-01-10 04:52:52,695 | INFO     | time since job start (2347s) is within the limit (349056.0s)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | 
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | job summary report
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | --------------------------------------------------
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | PanDA job id: 6964539094
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | task id: 47898826
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | errors: (none)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | pilot state: finished 
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | transexitcode: 0
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | exeerrorcode: 0
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | exeerrordiag: 
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | exitcode: 0
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | exitmsg: OK
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | cpuconsumptiontime: 23440 s
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | nevents: 400
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | neventsw: 0
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | pid: 484830
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | pgrp: 484830
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | corecount: 12
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | event service: False
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | sizes: {0: 2283925, 2: 2284187, 11: 2284215, 2324: 2309371, 2325: 2318383, 2326: 2318439, 2334: 2318793}
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | --------------------------------------------------
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | 
[2026-01-10 04:53:54] 2026-01-10 04:52:52,706 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | job 6964539094 has completed (purged errors)
[2026-01-10 04:53:54] 2026-01-10 04:52:52,721 | INFO     | overall cleanup function is called
[2026-01-10 04:53:54] 2026-01-10 04:52:53,727 | INFO     | --- collectZombieJob: --- 10, [484830]
[2026-01-10 04:53:54] 2026-01-10 04:52:53,727 | INFO     | zombie collector waiting for pid 484830
[2026-01-10 04:53:54] 2026-01-10 04:52:53,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:53:54] 2026-01-10 04:52:53,728 | INFO     | collected zombie processes
[2026-01-10 04:53:54] 2026-01-10 04:52:53,728 | INFO     | will attempt to kill all subprocesses of pid=484830
[2026-01-10 04:53:54] 2026-01-10 04:52:53,756 | INFO     | process IDs to be killed: [484830] (in reverse order)
[2026-01-10 04:53:54] 2026-01-10 04:52:53,785 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:53:54] 2026-01-10 04:52:53,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:53:54] 2026-01-10 04:52:53,786 | INFO     | did not find any defunct processes belonging to 484830
[2026-01-10 04:53:54] 2026-01-10 04:52:53,787 | INFO     | did not find any defunct processes belonging to 484830
[2026-01-10 04:53:54] 2026-01-10 04:52:53,787 | INFO     | ready for new job
[2026-01-10 04:53:54] 2026-01-10 04:52:53,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:53:54] 2026-01-10 04:52:53,788 | INFO     | ***************************************
[2026-01-10 04:53:54] 2026-01-10 04:52:53,788 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:53:54] 2026-01-10 04:52:53,788 | INFO     | ***************************************
[2026-01-10 04:53:54] 2026-01-10 04:52:53,788 | INFO     | 
[2026-01-10 04:53:54] 2026-01-10 04:52:53,789 | INFO     | pilot is running in a VM
[2026-01-10 04:53:54] 2026-01-10 04:52:53,789 | INFO     | architecture information:
[2026-01-10 04:53:54] 2026-01-10 04:52:53,789 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:53:54] 2026-01-10 04:52:53,798 | INFO     | cat /etc/os-release:
[2026-01-10 04:53:54] NAME="CentOS Linux"
[2026-01-10 04:53:54] VERSION="7 (Core)"
[2026-01-10 04:53:54] ID="centos"
[2026-01-10 04:53:54] ID_LIKE="rhel fedora"
[2026-01-10 04:53:54] VERSION_ID="7"
[2026-01-10 04:53:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:53:54] ANSI_COLOR="0;31"
[2026-01-10 04:53:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:53:54] HOME_URL="https://www.centos.org/"
[2026-01-10 04:53:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:53:54] 
[2026-01-10 04:53:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:53:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:53:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:53:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:53:54] 
[2026-01-10 04:53:54] 2026-01-10 04:52:53,798 | INFO     | ***************************************
[2026-01-10 04:53:54] 2026-01-10 04:52:54,301 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-10 04:53:54] 2026-01-10 04:52:54,309 | INFO     | sufficient remaining disk space (73218916352 B)
[2026-01-10 04:53:54] 2026-01-10 04:52:54,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:53:54] 2026-01-10 04:52:54,310 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:53:54] 2026-01-10 04:52:54,310 | INFO     | update_server=False
[2026-01-10 04:53:54] 2026-01-10 04:52:54,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:53:54] 2026-01-10 04:52:54,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:53:54] 2026-01-10 04:52:54,310 | INFO     | aborting loop
[2026-01-10 04:53:54] 2026-01-10 04:52:54,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:53:54] 2026-01-10 04:52:54,313 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 04:53:54] 2026-01-10 04:52:54,313 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:53:54] 2026-01-10 04:52:54,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:53:54] 2026-01-10 04:52:54,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:53:54] 2026-01-10 04:52:54,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:53:54] 2026-01-10 04:52:55,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:53:54] 2026-01-10 04:52:55,315 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:55,315 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:55,315 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:55,360 | INFO     | all data control threads have been joined
[2026-01-10 04:53:54] 2026-01-10 04:52:55,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:55,606 | INFO     | all payload control threads have been joined
[2026-01-10 04:53:54] 2026-01-10 04:52:55,624 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:55,652 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:55,713 | INFO     | all job control threads have been joined
[2026-01-10 04:53:54] 2026-01-10 04:52:56,246 | INFO     | [job] validate thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,336 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,363 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,365 | INFO     | [data] control thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,441 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,555 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,612 | INFO     | [payload] control thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,718 | INFO     | [job] control thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:56,890 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:52:59,135 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:53:54] 2026-01-10 04:53:48,947 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:53:54] 2026-01-10 04:53:49,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135248897410880)>', '<ExcThread(monitor, started 135248050386688)>']
[2026-01-10 04:53:54] 2026-01-10 04:53:49,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:53:54] 2026-01-10 04:53:49,584 | INFO     | [monitor] control thread has ended
[2026-01-10 04:53:54] 2026-01-10 04:53:54,521 | INFO     | all workflow threads have been joined
[2026-01-10 04:53:54] 2026-01-10 04:53:54,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:53:54] 2026-01-10 04:53:54,521 | INFO     | traces error code: 0
[2026-01-10 04:53:54] 2026-01-10 04:53:54,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:53:54] 2026-01-10 04:53:54,570 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:53:54] 2026-01-10 04:53:54,571 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:53:54] 2026-01-10 04:53:54,572 [wrapper] pilotpid: 478173
[2026-01-10 04:53:54] 2026-01-10 04:53:54,574 [wrapper] Pilot exit status: 0
[2026-01-10 04:53:54] 2026-01-10 04:53:54,581 [wrapper] pandaids: 6964539094
[2026-01-10 04:53:54] 2026-01-10 04:53:54,598 [wrapper] cleanup supervisor_pilot  494275 478174
[2026-01-10 04:53:54] 2026-01-10 04:53:54,599 [wrapper] Test setup, not cleaning
[2026-01-10 04:53:54] 2026-01-10 04:53:54,601 [wrapper] apfmon messages muted
[2026-01-10 04:53:54] 2026-01-10 04:53:54,602 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:53:54] 2026-01-10 04:53:54,603 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:53:54]  *** Error codes and diagnostics ***
[2026-01-10 04:53:54]     "exeErrorCode": 0,
[2026-01-10 04:53:54]     "exeErrorDiag": "",
[2026-01-10 04:53:54]     "pilotErrorCode": 0,
[2026-01-10 04:53:54]     "pilotErrorDiag": "",
[2026-01-10 04:53:54]  *** Listing of results directory ***
[2026-01-10 04:53:54] total 446568
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc      5112 Jan  9 15:55 queuedata.json
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc    579449 Jan  9 15:55 pilot3.tar.gz
[2026-01-10 04:53:54] -rwx------ 1 boinc boinc     36322 Jan  9 15:56 runpilot2-wrapper.sh
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc       100 Jan 10 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:53:54] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 04:13 run_atlas
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc       105 Jan 10 04:13 job.xml
[2026-01-10 04:53:54] -rw-r--r-- 2 boinc boinc     15847 Jan 10 04:13 start_atlas.sh
[2026-01-10 04:53:54] drwxrwx--x 2 boinc boinc      4096 Jan 10 04:13 shared
[2026-01-10 04:53:54] -rw-r--r-- 2 boinc boinc    592405 Jan 10 04:13 input.tar.gz
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc      6943 Jan 10 04:13 init_data.xml
[2026-01-10 04:53:54] -rw-r--r-- 2 boinc boinc 224318884 Jan 10 04:13 EVNT.47898824._000943.pool.root.1
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc         0 Jan 10 04:13 boinc_lockfile
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc      2518 Jan 10 04:13 pandaJob.out
[2026-01-10 04:53:54] -rw------- 1 boinc boinc    989374 Jan 10 04:13 agis_schedconf.cvmfs.json
[2026-01-10 04:53:54] -rw------- 1 boinc boinc   1516240 Jan 10 04:13 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:53:54] drwx------ 5 boinc boinc      4096 Jan 10 04:13 pilot3
[2026-01-10 04:53:54] -rw------- 1 boinc boinc 227571738 Jan 10 04:52 HITS.47898826._039978.pool.root.1
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc       529 Jan 10 04:52 boinc_task_state.xml
[2026-01-10 04:53:54] -rw------- 1 boinc boinc      1018 Jan 10 04:52 memory_monitor_summary.json
[2026-01-10 04:53:54] -rw------- 1 boinc boinc    357030 Jan 10 04:52 log.47898826._039978.job.log.tgz.1
[2026-01-10 04:53:54] -rw------- 1 boinc boinc      7733 Jan 10 04:52 heartbeat.json
[2026-01-10 04:53:54] -rw------- 1 boinc boinc        95 Jan 10 04:52 pilot_heartbeat.json
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc      8192 Jan 10 04:53 boinc_mmap_file
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc        27 Jan 10 04:53 wrapper_checkpoint.txt
[2026-01-10 04:53:54] -rw------- 1 boinc boinc      4621 Jan 10 04:53 pilotlog.txt
[2026-01-10 04:53:54] -rw------- 1 boinc boinc    383111 Jan 10 04:53 log.47898826._039978.job.log.1
[2026-01-10 04:53:54] -rw------- 1 boinc boinc       357 Jan 10 04:53 output.list
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc       620 Jan 10 04:53 runtime_log
[2026-01-10 04:53:54] -rw------- 1 boinc boinc    757760 Jan 10 04:53 result.tar.gz
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc      8890 Jan 10 04:53 runtime_log.err
[2026-01-10 04:53:54] -rw------- 1 boinc boinc       642 Jan 10 04:53 6XiLDmP1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtShKDmiha8on.diag
[2026-01-10 04:53:54] -rw-r--r-- 1 boinc boinc     22438 Jan 10 04:53 stderr.txt
[2026-01-10 04:53:54] HITS file was successfully produced:
[2026-01-10 04:53:54] -rw------- 1 boinc boinc 227571738 Jan 10 04:52 shared/HITS.pool.root.1
[2026-01-10 04:53:54]  *** Contents of shared directory: ***
[2026-01-10 04:53:54] total 442648
[2026-01-10 04:53:54] -rw-r--r-- 2 boinc boinc     15847 Jan 10 04:13 start_atlas.sh
[2026-01-10 04:53:54] -rw-r--r-- 2 boinc boinc    592405 Jan 10 04:13 input.tar.gz
[2026-01-10 04:53:54] -rw-r--r-- 2 boinc boinc 224318884 Jan 10 04:13 ATLAS.root_0
[2026-01-10 04:53:54] -rw------- 1 boinc boinc 227571738 Jan 10 04:52 HITS.pool.root.1
[2026-01-10 04:53:54] -rw------- 1 boinc boinc    757760 Jan 10 04:53 result.tar.gz
04:53:55 (474311): run_atlas exited; CPU time 23446.333500
04:53:55 (474311): called boinc_finish(0)

</stderr_txt>
]]>

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