Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:30:32 (17069): wrapper (7.7.26015): starting
18:30:32 (17069): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:30:32] Arguments: --nthreads 8
[2026-01-09 18:30:32] Threads: 8
[2026-01-09 18:30:32] Checking for CVMFS
[2026-01-09 18:30:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:30:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:30:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:30:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:30:33] 2.11.2.0 2701 124421 84944 154961 3 80 20250448 20275201 1 130560 0 29037913 99.864 6511741 31248 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:30:33] CVMFS is ok
[2026-01-09 18:30:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:30:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:30:33] Further information can be found at the LHC@home message board.
[2026-01-09 18:30:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:30:33] Checking for apptainer binary...
[2026-01-09 18:30:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:30:33] Running /usr/bin/apptainer --version
[2026-01-09 18:30:33] apptainer version 1.3.2-1.el7
[2026-01-09 18:30:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:30:34] c-204-1.aglt2.org
[2026-01-09 18:30:34] apptainer works
[2026-01-09 18:30:34] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:30:34] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:30:34] Starting ATLAS job with PandaID=6963192016
[2026-01-09 18:30:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:33:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:33:17] 2026-01-10 02:32:21,914 | INFO     | monitor loop #810: job 0:6963192016 is in state 'finished'
[2026-01-09 21:33:17] 2026-01-10 02:32:21,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:33:17] 2026-01-10 02:32:23,898 | INFO     | time since job start (10891s) is within the limit (349056.0s)
[2026-01-09 21:33:17] 2026-01-10 02:32:24,430 | INFO     | monitor loop #811: job 0:6963192016 is in state 'finished'
[2026-01-09 21:33:17] 2026-01-10 02:32:24,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:33:17] 2026-01-10 02:32:25,904 | INFO     | time since job start (10893s) is within the limit (349056.0s)
[2026-01-09 21:33:17] 2026-01-10 02:32:26,931 | INFO     | monitor loop #812: job 0:6963192016 is in state 'finished'
[2026-01-09 21:33:17] 2026-01-10 02:32:26,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:33:17] 2026-01-10 02:32:27,012 | INFO     | PID=20743 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:33:17] 2026-01-10 02:32:28,013 | INFO     | time since job start (10896s) is within the limit (349056.0s)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,265 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 21:33:17] 2026-01-10 02:32:28,268 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-09 21:33:17] 2026-01-10 02:32:28,270 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963192016/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,271 | INFO     | extracted standard info from prmon json
[2026-01-09 21:33:17] 2026-01-10 02:32:28,271 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:33:17] 2026-01-10 02:32:28,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:33:17] 2026-01-10 02:32:28,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:33:17] 2026-01-10 02:32:28,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:33:17] 2026-01-10 02:32:28,276 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:33:17] 2026-01-10 02:32:28,277 | INFO     | sum of square deviations: 1748737904.5
[2026-01-09 21:33:17] 2026-01-10 02:32:28,277 | INFO     | sum of deviations: -8009358743.000001
[2026-01-09 21:33:17] 2026-01-10 02:32:28,278 | INFO     | mean x: 1768006882.5
[2026-01-09 21:33:17] 2026-01-10 02:32:28,278 | INFO     | mean y: 2537451.179775281
[2026-01-09 21:33:17] 2026-01-10 02:32:28,278 | INFO     | intersect: 8100149646.578694
[2026-01-09 21:33:17] 2026-01-10 02:32:28,278 | INFO     | chi2: 1.6544780660434562
[2026-01-09 21:33:17] 2026-01-10 02:32:28,279 | INFO     | sum of square deviations: 1605470102.0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,280 | INFO     | sum of deviations: -7546902980.999997
[2026-01-09 21:33:17] 2026-01-10 02:32:28,280 | INFO     | mean x: 1768006730.0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,280 | INFO     | mean y: 2537943.5664739884
[2026-01-09 21:33:17] 2026-01-10 02:32:28,281 | INFO     | intersect: 8313483905.402303
[2026-01-09 21:33:17] 2026-01-10 02:32:28,281 | INFO     | chi2: 1.6539257546621433
[2026-01-09 21:33:17] 2026-01-10 02:32:28,281 | INFO     | current chi2=1.6539257546621433 (change=0.0333828167715543 %)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,281 | INFO     | right removable region: 172
[2026-01-09 21:33:17] 2026-01-10 02:32:28,281 | INFO     | sum of square deviations: 1605470102.0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,282 | INFO     | sum of deviations: -34805769119.00001
[2026-01-09 21:33:17] 2026-01-10 02:32:28,283 | INFO     | mean x: 1768007035.0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,283 | INFO     | mean y: 2565599.4393063583
[2026-01-09 21:33:17] 2026-01-10 02:32:28,283 | INFO     | intersect: 38332052136.94555
[2026-01-09 21:33:17] 2026-01-10 02:32:28,283 | INFO     | chi2: 0.19052786709266847
[2026-01-09 21:33:17] 2026-01-10 02:32:28,283 | INFO     | current chi2=0.19052786709266847 (change=88.48411042714518 %)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,283 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,284 | INFO     | sum of deviations: -34023758726.499992
[2026-01-09 21:33:17] 2026-01-10 02:32:28,285 | INFO     | mean x: 1768007187.5
[2026-01-09 21:33:17] 2026-01-10 02:32:28,285 | INFO     | mean y: 2564655.4226190476
[2026-01-09 21:33:17] 2026-01-10 02:32:28,285 | INFO     | intersect: 40916893812.56698
[2026-01-09 21:33:17] 2026-01-10 02:32:28,285 | INFO     | chi2: 0.17095875665053475
[2026-01-09 21:33:17] 2026-01-10 02:32:28,285 | INFO     | current chi2=0.17095875665053475 (change=10.270996437815443 %)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,285 | INFO     | left removable region: 20
[2026-01-09 21:33:17] 2026-01-10 02:32:28,286 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,286 | INFO     | sum of deviations: -22595652848.5
[2026-01-09 21:33:17] 2026-01-10 02:32:28,287 | INFO     | mean x: 1768007309.5
[2026-01-09 21:33:17] 2026-01-10 02:32:28,287 | INFO     | mean y: 2552857.5065789474
[2026-01-09 21:33:17] 2026-01-10 02:32:28,287 | INFO     | intersect: 36690090140.290924
[2026-01-09 21:33:17] 2026-01-10 02:32:28,287 | INFO     | chi2: 0.15147603651671668
[2026-01-09 21:33:17] 2026-01-10 02:32:28,287 | INFO     | current memory leak: -20.75 B/s (using 152 data points, chi2=0.15)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | could have reported an average CPU frequency of 2023 MHz (9 samples)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | ..............................
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | . Timing measurements:
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | . get job = 0 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | . initial setup = 2 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | . payload setup = 8 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | . stage-in = 0 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,288 | INFO     | . payload execution = 10854 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,289 | INFO     | . stage-out = 2 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,289 | INFO     | . log creation = 0 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,289 | INFO     | ..............................
[2026-01-09 21:33:17] 2026-01-10 02:32:28,377 | INFO     | 
[2026-01-09 21:33:17] 2026-01-10 02:32:28,377 | INFO     | job summary report
[2026-01-09 21:33:17] 2026-01-10 02:32:28,377 | INFO     | --------------------------------------------------
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | PanDA job id: 6963192016
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | task id: 47898826
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | errors: (none)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | pilot state: finished 
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | transexitcode: 0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | exeerrorcode: 0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,378 | INFO     | exeerrordiag: 
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | exitcode: 0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | exitmsg: OK
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | cpuconsumptiontime: 81790 s
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | nevents: 400
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | neventsw: 0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | pid: 27217
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | pgrp: 27217
[2026-01-09 21:33:17] 2026-01-10 02:32:28,379 | INFO     | corecount: 8
[2026-01-09 21:33:17] 2026-01-10 02:32:28,380 | INFO     | event service: False
[2026-01-09 21:33:17] 2026-01-10 02:32:28,380 | INFO     | sizes: {0: 2283971, 1: 2283971, 6: 2284261, 11: 2284289, 10866: 2313377, 10868: 2322375, 10869: 2322559, 10878: 2322817}
[2026-01-09 21:33:17] 2026-01-10 02:32:28,380 | INFO     | --------------------------------------------------
[2026-01-09 21:33:17] 2026-01-10 02:32:28,380 | INFO     | 
[2026-01-09 21:33:17] 2026-01-10 02:32:28,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:33:17] 2026-01-10 02:32:28,405 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,406 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,409 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,409 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:33:17] 2026-01-10 02:32:28,409 | INFO     | job 6963192016 has completed (purged errors)
[2026-01-09 21:33:17] 2026-01-10 02:32:28,410 | INFO     | overall cleanup function is called
[2026-01-09 21:33:17] 2026-01-10 02:32:29,417 | INFO     | --- collectZombieJob: --- 10, [27217]
[2026-01-09 21:33:17] 2026-01-10 02:32:29,417 | INFO     | zombie collector waiting for pid 27217
[2026-01-09 21:33:17] 2026-01-10 02:32:29,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:33:17] 2026-01-10 02:32:29,418 | INFO     | collected zombie processes
[2026-01-09 21:33:17] 2026-01-10 02:32:29,418 | INFO     | will attempt to kill all subprocesses of pid=27217
[2026-01-09 21:33:17] 2026-01-10 02:32:29,493 | INFO     | process IDs to be killed: [27217] (in reverse order)
[2026-01-09 21:33:17] 2026-01-10 02:32:29,540 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:33:17] 2026-01-10 02:32:29,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:33:17] 2026-01-10 02:32:29,544 | INFO     | did not find any defunct processes belonging to 27217
[2026-01-09 21:33:17] 2026-01-10 02:32:29,546 | INFO     | did not find any defunct processes belonging to 27217
[2026-01-09 21:33:17] 2026-01-10 02:32:29,547 | INFO     | ready for new job
[2026-01-09 21:33:17] 2026-01-10 02:32:29,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:33:17] 2026-01-10 02:32:29,549 | INFO     | ***************************************
[2026-01-09 21:33:17] 2026-01-10 02:32:29,549 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:33:17] 2026-01-10 02:32:29,549 | INFO     | ***************************************
[2026-01-09 21:33:17] 2026-01-10 02:32:29,549 | INFO     | 
[2026-01-09 21:33:17] 2026-01-10 02:32:29,550 | INFO     | architecture information:
[2026-01-09 21:33:17] 2026-01-10 02:32:29,551 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:33:17] 2026-01-10 02:32:29,568 | INFO     | cat /etc/os-release:
[2026-01-09 21:33:17] NAME="CentOS Linux"
[2026-01-09 21:33:17] VERSION="7 (Core)"
[2026-01-09 21:33:17] ID="centos"
[2026-01-09 21:33:17] ID_LIKE="rhel fedora"
[2026-01-09 21:33:17] VERSION_ID="7"
[2026-01-09 21:33:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:33:17] ANSI_COLOR="0;31"
[2026-01-09 21:33:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:33:17] HOME_URL="https://www.centos.org/"
[2026-01-09 21:33:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:33:17] 
[2026-01-09 21:33:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:33:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:33:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:33:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:33:17] 
[2026-01-09 21:33:17] 2026-01-10 02:32:29,569 | INFO     | ***************************************
[2026-01-09 21:33:17] 2026-01-10 02:32:30,072 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:33:17] 2026-01-10 02:32:30,091 | INFO     | sufficient remaining disk space (18534629376 B)
[2026-01-09 21:33:17] 2026-01-10 02:32:30,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:33:17] 2026-01-10 02:32:30,092 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:33:17] 2026-01-10 02:32:30,092 | INFO     | update_server=False
[2026-01-09 21:33:17] 2026-01-10 02:32:30,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:33:17] 2026-01-10 02:32:30,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:33:17] 2026-01-10 02:32:30,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:33:17] 2026-01-10 02:32:30,446 | INFO     | aborting loop
[2026-01-09 21:33:17] 2026-01-10 02:32:30,798 | INFO     | all data control threads have been joined
[2026-01-09 21:33:17] 2026-01-10 02:32:31,094 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,097 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,139 | INFO     | all job control threads have been joined
[2026-01-09 21:33:17] 2026-01-10 02:32:31,186 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,196 | INFO     | all payload control threads have been joined
[2026-01-09 21:33:17] 2026-01-10 02:32:31,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:33:17] 2026-01-10 02:32:31,443 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,449 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,708 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,711 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:31,804 | INFO     | [data] control thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:32,145 | INFO     | [job] control thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:32,202 | INFO     | [payload] control thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:32,278 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:32,279 | INFO     | [job] validate thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:32,532 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:32,599 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:33,390 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:32:33,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:33:17] 2026-01-10 02:32:37,472 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:33:17] 2026-01-10 02:33:01,205 | INFO     | PID=20743 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:33:17] 2026-01-10 02:33:01,206 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:33:17] 2026-01-10 02:33:01,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:33:17] 2026-01-10 02:33:01,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:33:17] 2026-01-10 02:33:09,933 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:33:17] 2026-01-10 02:33:11,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577872312128)>', '<ExcThread(monitor, started 140577249138432)>']
[2026-01-09 21:33:17] 2026-01-10 02:33:12,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:33:17] 2026-01-10 02:33:12,261 | INFO     | [monitor] control thread has ended
[2026-01-09 21:33:17] 2026-01-10 02:33:16,902 | INFO     | all workflow threads have been joined
[2026-01-09 21:33:17] 2026-01-10 02:33:16,902 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:33:17] 2026-01-10 02:33:16,903 | INFO     | traces error code: 0
[2026-01-09 21:33:17] 2026-01-10 02:33:16,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:33:17] 2026-01-10 02:33:17,016 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:33:17] 2026-01-10 02:33:17,021 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:33:17] 2026-01-10 02:33:17,026 [wrapper] pilotpid: 20743
[2026-01-09 21:33:17] 2026-01-10 02:33:17,032 [wrapper] Pilot exit status: 0
[2026-01-09 21:33:17] 2026-01-10 02:33:17,052 [wrapper] pandaids: 6963192016
[2026-01-09 21:33:17] 2026-01-10 02:33:17,098 [wrapper] cleanup supervisor_pilot 12899 20744
[2026-01-09 21:33:17] 2026-01-10 02:33:17,103 [wrapper] Test setup, not cleaning
[2026-01-09 21:33:17] 2026-01-10 02:33:17,108 [wrapper] apfmon messages muted
[2026-01-09 21:33:17] 2026-01-10 02:33:17,113 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:33:17] 2026-01-10 02:33:17,118 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:33:17]  *** Error codes and diagnostics ***
[2026-01-09 21:33:17]     "exeErrorCode": 0,
[2026-01-09 21:33:17]     "exeErrorDiag": "",
[2026-01-09 21:33:17]     "pilotErrorCode": 0,
[2026-01-09 21:33:17]     "pilotErrorDiag": "",
[2026-01-09 21:33:17]  *** Listing of results directory ***
[2026-01-09 21:33:17] total 443992
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 21:33:17] -rwx------ 1 boincer boincer     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer      5112 Jan  8 23:30 queuedata.json
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer       100 Jan  9 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:33:17] -rwxr-xr-x 1 boincer boincer      7986 Jan  9 18:30 run_atlas
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer       105 Jan  9 18:30 job.xml
[2026-01-09 21:33:17] -rw-r--r-- 2 boincer boincer 222526274 Jan  9 18:30 EVNT.47898824._001494.pool.root.1
[2026-01-09 21:33:17] -rw-r--r-- 2 boincer boincer     15847 Jan  9 18:30 start_atlas.sh
[2026-01-09 21:33:17] drwxrwx--x 2 boincer boincer      4096 Jan  9 18:30 shared
[2026-01-09 21:33:17] -rw-r--r-- 2 boincer boincer    592400 Jan  9 18:30 input.tar.gz
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer         0 Jan  9 18:30 boinc_lockfile
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer      2520 Jan  9 18:30 pandaJob.out
[2026-01-09 21:33:17] -rw------- 1 boincer boincer        57 Jan  9 18:30 setup.sh.local
[2026-01-09 21:33:17] -rw------- 1 boincer boincer    989374 Jan  9 18:30 agis_schedconf.cvmfs.json
[2026-01-09 21:33:17] drwx------ 5 boincer boincer      4096 Jan  9 18:30 pilot3
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer      5910 Jan  9 21:30 init_data.xml
[2026-01-09 21:33:17] -rw------- 1 boincer boincer 224332843 Jan  9 21:31 HITS.47898826._038884.pool.root.1
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer       530 Jan  9 21:31 boinc_task_state.xml
[2026-01-09 21:33:17] -rw------- 1 boincer boincer        95 Jan  9 21:32 pilot_heartbeat.json
[2026-01-09 21:33:17] -rw------- 1 boincer boincer      1055 Jan  9 21:32 memory_monitor_summary.json
[2026-01-09 21:33:17] -rw------- 1 boincer boincer   1516240 Jan  9 21:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:33:17] -rw------- 1 boincer boincer    413870 Jan  9 21:32 log.47898826._038884.job.log.tgz.1
[2026-01-09 21:33:17] -rw------- 1 boincer boincer      7865 Jan  9 21:32 heartbeat.json
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer        28 Jan  9 21:32 wrapper_checkpoint.txt
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer      8192 Jan  9 21:32 boinc_mmap_file
[2026-01-09 21:33:17] -rw------- 1 boincer boincer      4746 Jan  9 21:33 pilotlog.txt
[2026-01-09 21:33:17] -rw------- 1 boincer boincer   1518391 Jan  9 21:33 log.47898826._038884.job.log.1
[2026-01-09 21:33:17] -rw------- 1 boincer boincer       357 Jan  9 21:33 output.list
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer       620 Jan  9 21:33 runtime_log
[2026-01-09 21:33:17] -rw------- 1 boincer boincer   1955840 Jan  9 21:33 result.tar.gz
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer      9338 Jan  9 21:33 runtime_log.err
[2026-01-09 21:33:17] -rw------- 1 boincer boincer       662 Jan  9 21:33 gASKDmZFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHChKDmNGZhLo.diag
[2026-01-09 21:33:17] -rw-r--r-- 1 boincer boincer     21434 Jan  9 21:33 stderr.txt
[2026-01-09 21:33:17] HITS file was successfully produced:
[2026-01-09 21:33:17] -rw------- 1 boincer boincer 224332843 Jan  9 21:31 shared/HITS.pool.root.1
[2026-01-09 21:33:17]  *** Contents of shared directory: ***
[2026-01-09 21:33:17] total 438904
[2026-01-09 21:33:17] -rw-r--r-- 2 boincer boincer 222526274 Jan  9 18:30 ATLAS.root_0
[2026-01-09 21:33:17] -rw-r--r-- 2 boincer boincer     15847 Jan  9 18:30 start_atlas.sh
[2026-01-09 21:33:17] -rw-r--r-- 2 boincer boincer    592400 Jan  9 18:30 input.tar.gz
[2026-01-09 21:33:17] -rw------- 1 boincer boincer 224332843 Jan  9 21:31 HITS.pool.root.1
[2026-01-09 21:33:17] -rw------- 1 boincer boincer   1955840 Jan  9 21:33 result.tar.gz
21:33:18 (17069): run_atlas exited; CPU time 81723.300159
21:33:18 (17069): called boinc_finish(0)

</stderr_txt>
]]>

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