Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
16:56:39 (874475): wrapper (7.7.26015): starting
16:56:39 (874475): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 16:56:39] Arguments: --nthreads 4
[2026-01-09 16:56:39] Threads: 4
[2026-01-09 16:56:39] Checking for CVMFS
[2026-01-09 16:56:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:56:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:56:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:56:42] 2.12.7.0 5258 1162 64260 154962 3 58 5268837 6144000 2625 130560 0 1747785 99.992 40135 730 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 16:56:42] CVMFS is ok
[2026-01-09 16:56:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:56:42] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 16:56:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 16:56:42] Further information can be found at the LHC@home message board.
[2026-01-09 16:56:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:56:42] Checking for apptainer binary...
[2026-01-09 16:56:42] apptainer is not installed, using version from CVMFS
[2026-01-09 16:56:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:56:42] k8plus
[2026-01-09 16:56:42] apptainer works
[2026-01-09 16:56:42] Set ATHENA_PROC_NUMBER=4
[2026-01-09 16:56:42] Set ATHENA_CORE_NUMBER=4
[2026-01-09 16:56:42] Starting ATLAS job with PandaID=6964539398
[2026-01-09 16:56:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 17:33:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 17:33:04]  mtime=0
[2026-01-09 17:33:04]  protocol_id=None
[2026-01-09 17:33:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 17:33:04]  replicas=None
[2026-01-09 17:33:04]  scope=mc16_13TeV
[2026-01-09 17:33:04]  status=None
[2026-01-09 17:33:04]  status_code=0
[2026-01-09 17:33:04]  storage_token=
[2026-01-09 17:33:04]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6964539398/log.47962010._001962.job.log.tgz.1
[2026-01-09 17:33:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ee/01/log.47962010._001962.job.log.tgz.1
[2026-01-09 17:33:04]  workdir=None
[2026-01-09 17:33:04] ]
[2026-01-09 17:33:04] 2026-01-10 01:32:23,585 | INFO     | transferring file log.47962010._001962.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539398/log.47962010._001962.job.log.tgz.1 to /var/lib/boinc
[2026-01-09 17:33:04] 2026-01-10 01:32:23,585 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539398/log.47962010._001962.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.479620
[2026-01-09 17:33:04] 2026-01-10 01:32:23,598 | INFO     | adding to output.list: log.47962010._001962.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ee/01/log.47962010._001962.job.log.tgz.
[2026-01-09 17:33:04] 2026-01-10 01:32:23,598 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 17:33:04] 2026-01-10 01:32:23,599 | INFO     | summary of transferred files:
[2026-01-09 17:33:04] 2026-01-10 01:32:23,599 | INFO     |  -- lfn=log.47962010._001962.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 17:33:04] 2026-01-10 01:32:23,599 | INFO     | stage-out finished correctly
[2026-01-09 17:33:04] 2026-01-10 01:32:23,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 17:33:04] 2026-01-10 01:32:23,794 | INFO     | monitor loop #166: job 0:6964539398 is in state 'finished'
[2026-01-09 17:33:04] 2026-01-10 01:32:23,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:33:04] 2026-01-10 01:32:24,347 | INFO     | time since job start (2129s) is within the limit (349056.0s)
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | job 6964539398 has state=finished
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | preparing for final server update for job 6964539398 in state='finished'
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | this job has now completed (state=finished)
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | log transfer has been attempted: DONE
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | job 6964539398 has finished - writing final server update
[2026-01-09 17:33:04] 2026-01-10 01:32:24,573 | INFO     | total number of processed events: 50 (read)
[2026-01-09 17:33:04] 2026-01-10 01:32:24,576 | INFO     | executing command: lscpu
[2026-01-09 17:33:04] 2026-01-10 01:32:24,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 17:33:04] 2026-01-10 01:32:25,444 | INFO     | PID=878657 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 17:33:04] 2026-01-10 01:32:25,444 | INFO     | .. there are 3 such processes running
[2026-01-09 17:33:04] 2026-01-10 01:32:26,297 | INFO     | monitor loop #167: job 0:6964539398 is in state 'finished'
[2026-01-09 17:33:04] 2026-01-10 01:32:26,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,445 | INFO     | time since job start (2131s) is within the limit (349056.0s)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,835 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 17:33:04] 2026-01-10 01:32:26,837 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4013.74425
[2026-01-09 17:33:04] 2026-01-10 01:32:26,839 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6964539398/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,839 | INFO     | extracted standard info from prmon json
[2026-01-09 17:33:04] 2026-01-10 01:32:26,839 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 17:33:04] 2026-01-10 01:32:26,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | fitting pss+swap vs Time
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | sum of square deviations: 6798267.0
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | sum of deviations: -965461548.5
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | mean x: 1768007767.5
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | mean y: 2226015.464285714
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | intersect: 251087321227.3143
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | chi2: 0.02583922286154095
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | current memory leak: -142.02 B/s (using 28 data points, chi2=0.03)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | could have reported an average CPU frequency of 3923 MHz (5 samples)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | ..............................
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . Timing measurements:
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . get job = 0 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . initial setup = 4 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . payload setup = 4 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . stage-in = 0 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . payload execution = 2105 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,840 | INFO     | . stage-out = 0 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,841 | INFO     | . log creation = 0 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,841 | INFO     | ..............................
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | 
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | job summary report
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | --------------------------------------------------
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | PanDA job id: 6964539398
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | task id: 47962010
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | errors: (none)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | pilot state: finished 
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | transexitcode: 0
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | exeerrorcode: 0
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | exeerrordiag: 
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | exitcode: 0
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | exitmsg: OK
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | cpuconsumptiontime: 7354 s
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | nevents: 50
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | neventsw: 0
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | pid: 885292
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | pgrp: 885292
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | corecount: 4
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | event service: False
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | sizes: {0: 2284576, 3: 2284838, 11: 2284866, 2113: 2310701, 2114: 2319765, 2117: 2319987}
[2026-01-09 17:33:04] 2026-01-10 01:32:26,964 | INFO     | --------------------------------------------------
[2026-01-09 17:33:04] 2026-01-10 01:32:26,965 | INFO     | 
[2026-01-09 17:33:04] 2026-01-10 01:32:26,965 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | job 6964539398 has completed (purged errors)
[2026-01-09 17:33:04] 2026-01-10 01:32:26,981 | INFO     | overall cleanup function is called
[2026-01-09 17:33:04] 2026-01-10 01:32:27,991 | INFO     | --- collectZombieJob: --- 10, [885292]
[2026-01-09 17:33:04] 2026-01-10 01:32:27,991 | INFO     | zombie collector waiting for pid 885292
[2026-01-09 17:33:04] 2026-01-10 01:32:27,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 17:33:04] 2026-01-10 01:32:27,991 | INFO     | collected zombie processes
[2026-01-09 17:33:04] 2026-01-10 01:32:27,991 | INFO     | will attempt to kill all subprocesses of pid=885292
[2026-01-09 17:33:04] 2026-01-10 01:32:28,061 | INFO     | process IDs to be killed: [885292] (in reverse order)
[2026-01-09 17:33:04] 2026-01-10 01:32:28,109 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 17:33:04] 2026-01-10 01:32:28,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 17:33:04] 2026-01-10 01:32:28,113 | INFO     | did not find any defunct processes belonging to 885292
[2026-01-09 17:33:04] 2026-01-10 01:32:28,115 | INFO     | did not find any defunct processes belonging to 885292
[2026-01-09 17:33:04] 2026-01-10 01:32:28,115 | INFO     | ready for new job
[2026-01-09 17:33:04] 2026-01-10 01:32:28,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 17:33:04] 2026-01-10 01:32:28,116 | INFO     | ***************************************
[2026-01-09 17:33:04] 2026-01-10 01:32:28,117 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 17:33:04] 2026-01-10 01:32:28,117 | INFO     | ***************************************
[2026-01-09 17:33:04] 2026-01-10 01:32:28,117 | INFO     | 
[2026-01-09 17:33:04] 2026-01-10 01:32:28,117 | INFO     | architecture information:
[2026-01-09 17:33:04] 2026-01-10 01:32:28,118 | INFO     | executing command: cat /etc/os-release
[2026-01-09 17:33:04] 2026-01-10 01:32:28,130 | INFO     | cat /etc/os-release:
[2026-01-09 17:33:04] NAME="CentOS Linux"
[2026-01-09 17:33:04] VERSION="7 (Core)"
[2026-01-09 17:33:04] ID="centos"
[2026-01-09 17:33:04] ID_LIKE="rhel fedora"
[2026-01-09 17:33:04] VERSION_ID="7"
[2026-01-09 17:33:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 17:33:04] ANSI_COLOR="0;31"
[2026-01-09 17:33:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 17:33:04] HOME_URL="https://www.centos.org/"
[2026-01-09 17:33:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 17:33:04] 
[2026-01-09 17:33:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 17:33:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 17:33:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 17:33:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 17:33:04] 
[2026-01-09 17:33:04] 2026-01-10 01:32:28,131 | INFO     | ***************************************
[2026-01-09 17:33:04] 2026-01-10 01:32:28,634 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-09 17:33:04] 2026-01-10 01:32:28,647 | INFO     | sufficient remaining disk space (114581045248 B)
[2026-01-09 17:33:04] 2026-01-10 01:32:28,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 17:33:04] 2026-01-10 01:32:28,648 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 17:33:04] 2026-01-10 01:32:28,648 | INFO     | update_server=False
[2026-01-09 17:33:04] 2026-01-10 01:32:28,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 17:33:04] 2026-01-10 01:32:28,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:33:04] 2026-01-10 01:32:28,800 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 17:33:04] 2026-01-10 01:32:28,800 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 17:33:04] 2026-01-10 01:32:28,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 17:33:04] 2026-01-10 01:32:28,800 | INFO     | will abort loop
[2026-01-09 17:33:04] 2026-01-10 01:32:29,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 17:33:04] 2026-01-10 01:32:29,485 | INFO     | all data control threads have been joined
[2026-01-09 17:33:04] 2026-01-10 01:32:29,653 | INFO     | [job] queue monitor thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,653 | INFO     | [job] retrieve thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 17:33:04] 2026-01-10 01:32:29,732 | INFO     | all payload control threads have been joined
[2026-01-09 17:33:04] 2026-01-10 01:32:29,787 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,804 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,805 | INFO     | [job] job monitor thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,859 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,882 | INFO     | [data] copytool_in thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:29,902 | INFO     | all job control threads have been joined
[2026-01-09 17:33:04] 2026-01-10 01:32:30,262 | INFO     | [payload] validate_post thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:30,491 | INFO     | [data] control thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:30,738 | INFO     | [payload] control thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:30,908 | INFO     | [job] control thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:31,097 | INFO     | [job] validate thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:31,160 | INFO     | [data] copytool_out thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:31,215 | INFO     | [payload] failed_post thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:33,709 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:39,340 | INFO     | job.realtimelogging is not enabled
[2026-01-09 17:33:04] 2026-01-10 01:32:40,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 17:33:04] 2026-01-10 01:32:58,385 | INFO     | [monitor] cgroup control has ended
[2026-01-09 17:33:04] 2026-01-10 01:32:58,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130857503422272)>', '<ExcThread(monitor, started 130856966412032)>']
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | INFO     | PID=878657 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | INFO     | .. there are 3 such processes running
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 17:33:04] 2026-01-10 01:32:59,593 | INFO     | [monitor] control thread has ended
[2026-01-09 17:33:04] 2026-01-10 01:33:04,021 | INFO     | all workflow threads have been joined
[2026-01-09 17:33:04] 2026-01-10 01:33:04,021 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 17:33:04] 2026-01-10 01:33:04,021 | INFO     | traces error code: 0
[2026-01-09 17:33:04] 2026-01-10 01:33:04,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 17:33:04] 2026-01-10 01:33:04,097 [wrapper] ==== pilot stdout END ====
[2026-01-09 17:33:04] 2026-01-10 01:33:04,098 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 17:33:04] 2026-01-10 01:33:04,100 [wrapper] pilotpid: 878657
[2026-01-09 17:33:04] 2026-01-10 01:33:04,102 [wrapper] Pilot exit status: 0
[2026-01-09 17:33:04] 2026-01-10 01:33:04,108 [wrapper] pandaids: 6964539398
[2026-01-09 17:33:04] 2026-01-10 01:33:04,131 [wrapper] cleanup supervisor_pilot  907454 878658
[2026-01-09 17:33:04] 2026-01-10 01:33:04,132 [wrapper] Test setup, not cleaning
[2026-01-09 17:33:04] 2026-01-10 01:33:04,134 [wrapper] apfmon messages muted
[2026-01-09 17:33:04] 2026-01-10 01:33:04,136 [wrapper] ==== wrapper stdout END ====
[2026-01-09 17:33:04] 2026-01-10 01:33:04,138 [wrapper] ==== wrapper stderr END ====
[2026-01-09 17:33:04]  *** Error codes and diagnostics ***
[2026-01-09 17:33:04]     "exeErrorCode": 0,
[2026-01-09 17:33:04]     "exeErrorDiag": "",
[2026-01-09 17:33:04]     "pilotErrorCode": 0,
[2026-01-09 17:33:04]     "pilotErrorDiag": "",
[2026-01-09 17:33:04]  *** Listing of results directory ***
[2026-01-09 17:33:04] total 430128
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc    579449 Jan  9 07:55 pilot3.tar.gz
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc      5112 Jan  9 07:59 queuedata.json
[2026-01-09 17:33:04] -rwx------ 1 boinc boinc     36322 Jan  9 08:00 runpilot2-wrapper.sh
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 17:33:04] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:56 run_atlas
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:56 job.xml
[2026-01-09 17:33:04] -rw-r--r-- 2 boinc boinc 392712777 Jan  9 16:56 EVNT.47962006._000047.pool.root.1
[2026-01-09 17:33:04] -rw-r--r-- 2 boinc boinc    592613 Jan  9 16:56 input.tar.gz
[2026-01-09 17:33:04] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:56 shared
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:56 boinc_setup_complete
[2026-01-09 17:33:04] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:56 start_atlas.sh
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc      7245 Jan  9 16:56 init_data.xml
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:56 boinc_lockfile
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc      2890 Jan  9 16:56 pandaJob.out
[2026-01-09 17:33:04] -rw------- 1 boinc boinc    989374 Jan  9 16:56 agis_schedconf.cvmfs.json
[2026-01-09 17:33:04] -rw------- 1 boinc boinc   1516240 Jan  9 16:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 17:33:04] drwx------ 5 boinc boinc      4096 Jan  9 16:56 pilot3
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc       528 Jan  9 17:29 boinc_task_state.xml
[2026-01-09 17:33:04] -rw------- 1 boinc boinc        95 Jan  9 17:32 pilot_heartbeat.json
[2026-01-09 17:33:04] -rw------- 1 boinc boinc  41640801 Jan  9 17:32 HITS.47962010._001962.pool.root.1
[2026-01-09 17:33:04] -rw------- 1 boinc boinc      1019 Jan  9 17:32 memory_monitor_summary.json
[2026-01-09 17:33:04] -rw------- 1 boinc boinc    731324 Jan  9 17:32 log.47962010._001962.job.log.tgz.1
[2026-01-09 17:33:04] -rw------- 1 boinc boinc      8525 Jan  9 17:32 heartbeat.json
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc        26 Jan  9 17:32 wrapper_checkpoint.txt
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc      8192 Jan  9 17:32 boinc_mmap_file
[2026-01-09 17:33:04] -rw------- 1 boinc boinc      5088 Jan  9 17:33 pilotlog.txt
[2026-01-09 17:33:04] -rw------- 1 boinc boinc    357296 Jan  9 17:33 log.47962010._001962.job.log.1
[2026-01-09 17:33:04] -rw------- 1 boinc boinc       353 Jan  9 17:33 output.list
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc       620 Jan  9 17:33 runtime_log
[2026-01-09 17:33:04] -rw------- 1 boinc boinc   1105920 Jan  9 17:33 result.tar.gz
[2026-01-09 17:33:04] -rw------- 1 boinc boinc       648 Jan  9 17:33 QkxLDmS5Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrThKDmzny5kn.diag
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc      8908 Jan  9 17:33 runtime_log.err
[2026-01-09 17:33:04] -rw-r--r-- 1 boinc boinc     21886 Jan  9 17:33 stderr.txt
[2026-01-09 17:33:04] HITS file was successfully produced:
[2026-01-09 17:33:04] -rw------- 1 boinc boinc 41640801 Jan  9 17:32 shared/HITS.pool.root.1
[2026-01-09 17:33:04]  *** Contents of shared directory: ***
[2026-01-09 17:33:04] total 425864
[2026-01-09 17:33:04] -rw-r--r-- 2 boinc boinc 392712777 Jan  9 16:56 ATLAS.root_0
[2026-01-09 17:33:04] -rw-r--r-- 2 boinc boinc    592613 Jan  9 16:56 input.tar.gz
[2026-01-09 17:33:04] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:56 start_atlas.sh
[2026-01-09 17:33:04] -rw------- 1 boinc boinc  41640801 Jan  9 17:32 HITS.pool.root.1
[2026-01-09 17:33:04] -rw------- 1 boinc boinc   1105920 Jan  9 17:33 result.tar.gz
17:33:06 (874475): run_atlas exited; CPU time 7344.663727
17:33:06 (874475): called boinc_finish(0)

</stderr_txt>
]]>

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