Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:12:28 (1149747): wrapper (7.7.26015): starting
03:12:28 (1149747): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 03:12:28] Arguments: --nthreads 12
[2026-01-11 03:12:28] Threads: 12
[2026-01-11 03:12:28] Checking for CVMFS
[2026-01-11 03:12:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 03:12:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 03:12:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 03:12:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 03:12:29] 2.13.3.0 1088337 57 39820 155010 2 188 4006508 6144001 2751 130560 0 177520 99.996 1356 401 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 03:12:29] CVMFS is ok
[2026-01-11 03:12:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 03:12:29] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 03:12:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 03:12:29] Further information can be found at the LHC@home message board.
[2026-01-11 03:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 03:12:29] Checking for apptainer binary...
[2026-01-11 03:12:29] apptainer is not installed, using version from CVMFS
[2026-01-11 03:12:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 03:12:30] XeonFire
[2026-01-11 03:12:30] apptainer works
[2026-01-11 03:12:30] Set ATHENA_PROC_NUMBER=12
[2026-01-11 03:12:30] Set ATHENA_CORE_NUMBER=12
[2026-01-11 03:12:30] Starting ATLAS job with PandaID=6964539100
[2026-01-11 03:12:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:27:06]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:27:06] 2026-01-11 10:26:01,513 | INFO     | stage-out finished correctly
[2026-01-11 04:27:06] 2026-01-11 10:26:01,554 | INFO     | time since job start (4387s) is within the limit (349056.0s)
[2026-01-11 04:27:06] 2026-01-11 10:26:02,496 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 04:27:06] 2026-01-11 10:26:02,778 | INFO     | job 6964539100 has state=finished
[2026-01-11 04:27:06] 2026-01-11 10:26:02,780 | INFO     | preparing for final server update for job 6964539100 in state='finished'
[2026-01-11 04:27:06] 2026-01-11 10:26:03,053 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-11 04:27:06] 2026-01-11 10:26:03,054 | INFO     | this job has now completed (state=finished)
[2026-01-11 04:27:06] 2026-01-11 10:26:03,054 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 04:27:06] 2026-01-11 10:26:03,054 | INFO     | log transfer has been attempted: DONE
[2026-01-11 04:27:06] 2026-01-11 10:26:03,054 | INFO     | job 6964539100 has finished - writing final server update
[2026-01-11 04:27:06] 2026-01-11 10:26:03,054 | INFO     | total number of processed events: 400 (read)
[2026-01-11 04:27:06] 2026-01-11 10:26:03,056 | INFO     | executing command: lscpu
[2026-01-11 04:27:06] 2026-01-11 10:26:03,106 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 04:27:06] 2026-01-11 10:26:03,571 | INFO     | time since job start (4389s) is within the limit (349056.0s)
[2026-01-11 04:27:06] 2026-01-11 10:26:05,572 | INFO     | time since job start (4391s) is within the limit (349056.0s)
[2026-01-11 04:27:06] 2026-01-11 10:26:05,963 | WARNING  | process 1160801 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 04:27:06] 2026-01-11 10:26:05,963 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6964539100/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:27:06] 2026-01-11 10:26:05,964 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6964539100/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:27:06] 2026-01-11 10:26:05,964 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-11 04:27:06] 2026-01-11 10:26:05,964 | WARNING  | maxPSS not found in memory monitor output
[2026-01-11 04:27:06] 2026-01-11 10:26:05,965 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4560805 B
[2026-01-11 04:27:06] 2026-01-11 10:26:05,965 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16094 B
[2026-01-11 04:27:06] 2026-01-11 10:26:05,965 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2026-01-11 04:27:06] 2026-01-11 10:26:07,578 | INFO     | time since job start (4393s) is within the limit (349056.0s)
[2026-01-11 04:27:06] 2026-01-11 10:26:09,584 | INFO     | time since job start (4395s) is within the limit (349056.0s)
[2026-01-11 04:27:06] 2026-01-11 10:26:11,028 | INFO     | PID=1153795 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 04:27:06] 2026-01-11 10:26:12,029 | INFO     | time since job start (4398s) is within the limit (349056.0s)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,156 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 04:27:06] 2026-01-11 10:26:13,170 | INFO     | sufficient remaining disk space (1802552475648 B)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,170 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,172 | INFO     | size of work directory /var/lib/boinc-client/slots/10/PanDA_Pilot-6964539100: 4879727 B (within 4404019200 B limit)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,173 | INFO     | pfn file=/var/lib/boinc-client/slots/10/PanDA_Pilot-6964539100/HITS.47898826._039984.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,173 | INFO     | total size of present files: 0 B (workdir size: 4879727 B)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,173 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/10/PanDA_Pilot-6964539100/HITS.47898826._039984.pool.root.1 since it does not exist
[2026-01-11 04:27:06] 2026-01-11 10:26:13,198 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2682.0885
[2026-01-11 04:27:06] 2026-01-11 10:26:13,210 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-6964539100/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,211 | INFO     | extracted standard info from prmon json
[2026-01-11 04:27:06] 2026-01-11 10:26:13,211 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:27:06] 2026-01-11 10:26:13,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:27:06] 2026-01-11 10:26:13,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:27:06] 2026-01-11 10:26:13,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:27:06] 2026-01-11 10:26:13,212 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:27:06] 2026-01-11 10:26:13,212 | INFO     | sum of square deviations: 85136480.0
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | sum of deviations: 2257155793.9999995
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | mean x: 1768125059.0
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | mean y: 2687573.0615384616
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | intersect: -46874206109.15836
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | chi2: 0.0014008189757962312
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | current memory leak: 26.51 B/s (using 65 data points, chi2=0.00)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,213 | INFO     | could have reported an average CPU frequency of 2536 MHz (6 samples)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | ..............................
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . Timing measurements:
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . get job = 0 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . initial setup = 13 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . payload setup = 6 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . stage-in = 0 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . payload execution = 4360 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . stage-out = 0 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | . log creation = 0 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,214 | INFO     | ..............................
[2026-01-11 04:27:06] 2026-01-11 10:26:13,538 | INFO     | number of running child processes to parent process 1160801: 1
[2026-01-11 04:27:06] 2026-01-11 10:26:13,538 | INFO     | maximum number of monitored processes: 6
[2026-01-11 04:27:06] 2026-01-11 10:26:13,538 | INFO     | aborting job monitoring since job object (job id=6964539100) has expired
[2026-01-11 04:27:06] 2026-01-11 10:26:13,754 | INFO     | 
[2026-01-11 04:27:06] 2026-01-11 10:26:13,754 | INFO     | job summary report
[2026-01-11 04:27:06] 2026-01-11 10:26:13,755 | INFO     | --------------------------------------------------
[2026-01-11 04:27:06] 2026-01-11 10:26:13,755 | INFO     | PanDA job id: 6964539100
[2026-01-11 04:27:06] 2026-01-11 10:26:13,755 | INFO     | task id: 47898826
[2026-01-11 04:27:06] 2026-01-11 10:26:13,755 | INFO     | errors: (none)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,755 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:27:06] 2026-01-11 10:26:13,756 | INFO     | pilot state: finished 
[2026-01-11 04:27:06] 2026-01-11 10:26:13,756 | INFO     | transexitcode: 0
[2026-01-11 04:27:06] 2026-01-11 10:26:13,756 | INFO     | exeerrorcode: 0
[2026-01-11 04:27:06] 2026-01-11 10:26:13,756 | INFO     | exeerrordiag: 
[2026-01-11 04:27:06] 2026-01-11 10:26:13,756 | INFO     | exitcode: 0
[2026-01-11 04:27:06] 2026-01-11 10:26:13,756 | INFO     | exitmsg: OK
[2026-01-11 04:27:06] 2026-01-11 10:26:13,757 | INFO     | cpuconsumptiontime: 48254 s
[2026-01-11 04:27:06] 2026-01-11 10:26:13,757 | INFO     | nevents: 400
[2026-01-11 04:27:06] 2026-01-11 10:26:13,757 | INFO     | neventsw: 0
[2026-01-11 04:27:06] 2026-01-11 10:26:13,757 | INFO     | pid: 1160801
[2026-01-11 04:27:06] 2026-01-11 10:26:13,757 | INFO     | pgrp: 1160801
[2026-01-11 04:27:06] 2026-01-11 10:26:13,757 | INFO     | corecount: 12
[2026-01-11 04:27:06] 2026-01-11 10:26:13,758 | INFO     | event service: False
[2026-01-11 04:27:06] 2026-01-11 10:26:13,758 | INFO     | sizes: {0: 2283926, 5: 2284188, 11: 2284244, 4369: 2310092, 4370: 2310091, 4371: 2319161, 4372: 2319345, 4383: 2319663}
[2026-01-11 04:27:06] 2026-01-11 10:26:13,758 | INFO     | --------------------------------------------------
[2026-01-11 04:27:06] 2026-01-11 10:26:13,758 | INFO     | 
[2026-01-11 04:27:06] 2026-01-11 10:26:13,758 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2026-01-11 04:27:06] 2026-01-11 10:26:13,784 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,784 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,784 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,784 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,786 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:27:06] 2026-01-11 10:26:13,787 | INFO     | job 6964539100 has completed (purged errors)
[2026-01-11 04:27:06] 2026-01-11 10:26:13,787 | INFO     | overall cleanup function is called
[2026-01-11 04:27:06] 2026-01-11 10:26:14,796 | INFO     | --- collectZombieJob: --- 10, [1160801]
[2026-01-11 04:27:06] 2026-01-11 10:26:14,797 | INFO     | zombie collector waiting for pid 1160801
[2026-01-11 04:27:06] 2026-01-11 10:26:14,797 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:27:06] 2026-01-11 10:26:14,797 | INFO     | collected zombie processes
[2026-01-11 04:27:06] 2026-01-11 10:26:14,797 | INFO     | will attempt to kill all subprocesses of pid=1160801
[2026-01-11 04:27:06] 2026-01-11 10:26:15,182 | INFO     | process IDs to be killed: [1160801] (in reverse order)
[2026-01-11 04:27:06] 2026-01-11 10:26:15,290 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:27:06] 2026-01-11 10:26:15,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:27:06] 2026-01-11 10:26:15,299 | INFO     | did not find any defunct processes belonging to 1160801
[2026-01-11 04:27:06] 2026-01-11 10:26:15,307 | INFO     | did not find any defunct processes belonging to 1160801
[2026-01-11 04:27:06] 2026-01-11 10:26:15,307 | INFO     | ready for new job
[2026-01-11 04:27:06] 2026-01-11 10:26:15,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:27:06] 2026-01-11 10:26:15,310 | INFO     | ***************************************
[2026-01-11 04:27:06] 2026-01-11 10:26:15,310 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:27:06] 2026-01-11 10:26:15,310 | INFO     | ***************************************
[2026-01-11 04:27:06] 2026-01-11 10:26:15,310 | INFO     | 
[2026-01-11 04:27:06] 2026-01-11 10:26:15,316 | INFO     | architecture information:
[2026-01-11 04:27:06] 2026-01-11 10:26:15,316 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:27:06] 2026-01-11 10:26:15,331 | INFO     | cat /etc/os-release:
[2026-01-11 04:27:06] NAME="CentOS Linux"
[2026-01-11 04:27:06] VERSION="7 (Core)"
[2026-01-11 04:27:06] ID="centos"
[2026-01-11 04:27:06] ID_LIKE="rhel fedora"
[2026-01-11 04:27:06] VERSION_ID="7"
[2026-01-11 04:27:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:27:06] ANSI_COLOR="0;31"
[2026-01-11 04:27:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:27:06] HOME_URL="https://www.centos.org/"
[2026-01-11 04:27:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:27:06] 
[2026-01-11 04:27:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:27:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:27:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:27:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:27:06] 
[2026-01-11 04:27:06] 2026-01-11 10:26:15,332 | INFO     | ***************************************
[2026-01-11 04:27:06] 2026-01-11 10:26:15,835 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/10
[2026-01-11 04:27:06] 2026-01-11 10:26:15,851 | INFO     | sufficient remaining disk space (1802557718528 B)
[2026-01-11 04:27:06] 2026-01-11 10:26:15,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:27:06] 2026-01-11 10:26:15,852 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:27:06] 2026-01-11 10:26:15,852 | INFO     | update_server=False
[2026-01-11 04:27:06] 2026-01-11 10:26:15,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:27:06] 2026-01-11 10:26:16,042 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 04:27:06] 2026-01-11 10:26:16,043 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 04:27:06] 2026-01-11 10:26:16,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:27:06] 2026-01-11 10:26:16,043 | INFO     | will abort loop
[2026-01-11 04:27:06] 2026-01-11 10:26:16,080 | INFO     | all data control threads have been joined
[2026-01-11 04:27:06] 2026-01-11 10:26:16,857 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:16,884 | INFO     | all payload control threads have been joined
[2026-01-11 04:27:06] 2026-01-11 10:26:16,913 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,048 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:27:06] 2026-01-11 10:26:17,086 | INFO     | [data] control thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,124 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,333 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,370 | INFO     | all job control threads have been joined
[2026-01-11 04:27:06] 2026-01-11 10:26:17,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:27:06] 2026-01-11 10:26:17,643 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,842 | INFO     | [job] validate thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,851 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:17,890 | INFO     | [payload] control thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:18,025 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:18,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:27:06] 2026-01-11 10:26:18,373 | INFO     | [job] control thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:19,084 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:19,288 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:21,609 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:26,098 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:27:06] 2026-01-11 10:26:27,104 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:27:06] 2026-01-11 10:26:45,573 | INFO     | PID=1153795 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:27:06] 2026-01-11 10:26:45,574 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:27:06] 2026-01-11 10:26:45,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:27:06] 2026-01-11 10:26:45,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:27:06] 2026-01-11 10:27:00,450 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:27:06] 2026-01-11 10:27:00,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126385773295424)>', '<ExcThread(monitor, started 126384705890048)>']
[2026-01-11 04:27:06] 2026-01-11 10:27:01,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:27:06] 2026-01-11 10:27:01,655 | INFO     | [monitor] control thread has ended
[2026-01-11 04:27:06] 2026-01-11 10:27:05,745 | INFO     | all workflow threads have been joined
[2026-01-11 04:27:06] 2026-01-11 10:27:05,745 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:27:06] 2026-01-11 10:27:05,746 | INFO     | traces error code: 0
[2026-01-11 04:27:06] 2026-01-11 10:27:05,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:27:06] 2026-01-11 10:27:05,847 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:27:06] 2026-01-11 10:27:05,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:27:06] 2026-01-11 10:27:05,854 [wrapper] pilotpid: 1153795
[2026-01-11 04:27:06] 2026-01-11 10:27:05,857 [wrapper] Pilot exit status: 0
[2026-01-11 04:27:06] 2026-01-11 10:27:05,869 [wrapper] pandaids: 6964539100
[2026-01-11 04:27:06] 2026-01-11 10:27:05,921 [wrapper] cleanup supervisor_pilot 1216134 1153796
[2026-01-11 04:27:06] 2026-01-11 10:27:05,925 [wrapper] Test setup, not cleaning
[2026-01-11 04:27:06] 2026-01-11 10:27:05,928 [wrapper] apfmon messages muted
[2026-01-11 04:27:06] 2026-01-11 10:27:05,932 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:27:06] 2026-01-11 10:27:05,934 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:27:06]  *** Error codes and diagnostics ***
[2026-01-11 04:27:06]     "exeErrorCode": 0,
[2026-01-11 04:27:06]     "exeErrorDiag": "",
[2026-01-11 04:27:06]     "pilotErrorCode": 0,
[2026-01-11 04:27:06]     "pilotErrorDiag": "",
[2026-01-11 04:27:06]  *** Listing of results directory ***
[2026-01-11 04:27:06] total 440756
[2026-01-11 04:27:06] -rw-r--r-- 1 mark mark    579449 Jan  9 09:55 pilot3.tar.gz
[2026-01-11 04:27:06] -rwx------ 1 mark mark     36322 Jan  9 09:59 runpilot2-wrapper.sh
[2026-01-11 04:27:06] -rw-r--r-- 1 mark mark      5112 Jan  9 09:59 queuedata.json
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark       100 Jan 11 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:27:06] -rwxr-xr-x 1 mark mark      7986 Jan 11 03:12 run_atlas
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark       105 Jan 11 03:12 job.xml
[2026-01-11 04:27:06] -rw-r--r-- 2 mark mark 224003345 Jan 11 03:12 EVNT.47898824._000958.pool.root.1
[2026-01-11 04:27:06] -rw-r--r-- 2 mark mark     15847 Jan 11 03:12 start_atlas.sh
[2026-01-11 04:27:06] drwxrwx--x 2 mark mark      4096 Jan 11 03:12 shared
[2026-01-11 04:27:06] -rw-r--r-- 2 mark mark    592395 Jan 11 03:12 input.tar.gz
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark      9265 Jan 11 03:12 init_data.xml
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark         0 Jan 11 03:12 boinc_setup_complete
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark         0 Jan 11 03:12 boinc_lockfile
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark      2518 Jan 11 03:12 pandaJob.out
[2026-01-11 04:27:06] -rw------- 1 mark mark    989548 Jan 11 03:12 agis_schedconf.cvmfs.json
[2026-01-11 04:27:06] -rw------- 1 mark mark   1516240 Jan 11 03:12 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:27:06] drwx------ 5 mark mark      4096 Jan 11 03:12 pilot3
[2026-01-11 04:27:06] -rw------- 1 mark mark 221319273 Jan 11 04:25 HITS.47898826._039984.pool.root.1
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark       529 Jan 11 04:25 boinc_task_state.xml
[2026-01-11 04:27:06] -rw------- 1 mark mark      1035 Jan 11 04:25 memory_monitor_summary.json
[2026-01-11 04:27:06] -rw------- 1 mark mark    395306 Jan 11 04:26 log.47898826._039984.job.log.tgz.1
[2026-01-11 04:27:06] -rw------- 1 mark mark      7790 Jan 11 04:26 heartbeat.json
[2026-01-11 04:27:06] -rw------- 1 mark mark        95 Jan 11 04:26 pilot_heartbeat.json
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark        27 Jan 11 04:27 wrapper_checkpoint.txt
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark      8192 Jan 11 04:27 boinc_mmap_file
[2026-01-11 04:27:06] -rw------- 1 mark mark      5016 Jan 11 04:27 pilotlog.txt
[2026-01-11 04:27:06] -rw------- 1 mark mark    647513 Jan 11 04:27 log.47898826._039984.job.log.1
[2026-01-11 04:27:06] -rw------- 1 mark mark       357 Jan 11 04:27 output.list
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark       620 Jan 11 04:27 runtime_log
[2026-01-11 04:27:06] -rw------- 1 mark mark   1064960 Jan 11 04:27 result.tar.gz
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark      8903 Jan 11 04:27 runtime_log.err
[2026-01-11 04:27:06] -rw------- 1 mark mark       645 Jan 11 04:27 5m1KDmK4Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoemKDmXWq0vn.diag
[2026-01-11 04:27:06] -rw-rw-r-- 1 mark mark     22712 Jan 11 04:27 stderr.txt
[2026-01-11 04:27:06] HITS file was successfully produced:
[2026-01-11 04:27:06] -rw------- 1 mark mark 221319273 Jan 11 04:25 shared/HITS.pool.root.1
[2026-01-11 04:27:06]  *** Contents of shared directory: ***
[2026-01-11 04:27:06] total 436536
[2026-01-11 04:27:06] -rw-r--r-- 2 mark mark 224003345 Jan 11 03:12 ATLAS.root_0
[2026-01-11 04:27:06] -rw-r--r-- 2 mark mark     15847 Jan 11 03:12 start_atlas.sh
[2026-01-11 04:27:06] -rw-r--r-- 2 mark mark    592395 Jan 11 03:12 input.tar.gz
[2026-01-11 04:27:06] -rw------- 1 mark mark 221319273 Jan 11 04:25 HITS.pool.root.1
[2026-01-11 04:27:06] -rw------- 1 mark mark   1064960 Jan 11 04:27 result.tar.gz
04:27:08 (1149747): run_atlas exited; CPU time 48424.239822
04:27:08 (1149747): called boinc_finish(0)

</stderr_txt>
]]>

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