Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:54:54 (28012): wrapper (7.7.26015): starting
06:54:54 (28012): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 06:54:54] Arguments: --nthreads 8
[2026-01-10 06:54:54] Threads: 8
[2026-01-10 06:54:54] Checking for CVMFS
[2026-01-10 06:54:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:54:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:54:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:54:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:54:58] 2.11.2.0 16377 36439 100128 154969 0 62 22124136 25165824 899 130560 0 15870664 99.829 9445428 2197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 06:54:58] CVMFS is ok
[2026-01-10 06:54:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:54:58] Checking for apptainer binary...
[2026-01-10 06:54:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:54:58] Running /usr/bin/apptainer --version
[2026-01-10 06:54:58] apptainer version 1.3.2-1.el7
[2026-01-10 06:54:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:55:12] cg-vwn414.simple-grid.lan
[2026-01-10 06:55:12] apptainer works
[2026-01-10 06:55:12] Set ATHENA_PROC_NUMBER=8
[2026-01-10 06:55:12] Set ATHENA_CORE_NUMBER=8
[2026-01-10 06:55:12] Starting ATLAS job with PandaID=6964539052
[2026-01-10 06:55:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:59:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:59:42] 2026-01-10 11:58:39,958 | INFO     | time since job start (21524s) is within the limit (349056.0s)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,271 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 12:59:42] 2026-01-10 11:58:40,272 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 12:59:42] 2026-01-10 11:58:40,274 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6964539052/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,274 | INFO     | extracted standard info from prmon json
[2026-01-10 12:59:42] 2026-01-10 11:58:40,275 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:59:42] 2026-01-10 11:58:40,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:59:42] 2026-01-10 11:58:40,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:59:42] 2026-01-10 11:58:40,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:59:42] 2026-01-10 11:58:40,289 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:59:42] 2026-01-10 11:58:40,290 | INFO     | sum of square deviations: 12403750705.5
[2026-01-10 12:59:42] 2026-01-10 11:58:40,315 | INFO     | sum of deviations: 143733865558.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,316 | INFO     | mean x: 1768035743.5
[2026-01-10 12:59:42] 2026-01-10 11:58:40,316 | INFO     | mean y: 2457416.409356725
[2026-01-10 12:59:42] 2026-01-10 11:58:40,316 | INFO     | intersect: -20485427086.56475
[2026-01-10 12:59:42] 2026-01-10 11:58:40,317 | INFO     | chi2: 9.153784167221609
[2026-01-10 12:59:42] 2026-01-10 11:58:40,317 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,321 | INFO     | sum of deviations: 164432797612.99997
[2026-01-10 12:59:42] 2026-01-10 11:58:40,321 | INFO     | mean x: 1768035591.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,321 | INFO     | mean y: 2463227.8011869434
[2026-01-10 12:59:42] 2026-01-10 11:58:40,321 | INFO     | intersect: -24494663367.434216
[2026-01-10 12:59:42] 2026-01-10 11:58:40,322 | INFO     | chi2: 8.44460205717542
[2026-01-10 12:59:42] 2026-01-10 11:58:40,322 | INFO     | current chi2=8.44460205717542 (change=7.747420051541841 %)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,322 | INFO     | right removable region: 336
[2026-01-10 12:59:42] 2026-01-10 11:58:40,323 | INFO     | sum of square deviations: 11867638328.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,327 | INFO     | sum of deviations: 22713140708.99999
[2026-01-10 12:59:42] 2026-01-10 11:58:40,327 | INFO     | mean x: 1768035896.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,327 | INFO     | mean y: 2491826.6172106825
[2026-01-10 12:59:42] 2026-01-10 11:58:40,327 | INFO     | intersect: -3381302570.7621417
[2026-01-10 12:59:42] 2026-01-10 11:58:40,328 | INFO     | chi2: 4.132614984150828
[2026-01-10 12:59:42] 2026-01-10 11:58:40,328 | INFO     | current chi2=4.132614984150828 (change=54.853480171084534 %)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,329 | INFO     | sum of square deviations: 11347200663.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,343 | INFO     | sum of deviations: -71663673398.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,344 | INFO     | mean x: 1768036048.5
[2026-01-10 12:59:42] 2026-01-10 11:58:40,344 | INFO     | mean y: 2519454.891566265
[2026-01-10 12:59:42] 2026-01-10 11:58:40,344 | INFO     | intersect: 11168617746.31776
[2026-01-10 12:59:42] 2026-01-10 11:58:40,345 | INFO     | chi2: 1.223262194779656
[2026-01-10 12:59:42] 2026-01-10 11:58:40,345 | INFO     | current chi2=1.223262194779656 (change=70.39980255912921 %)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,346 | INFO     | sum of square deviations: 10842205148.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,349 | INFO     | sum of deviations: -94150012141.99997
[2026-01-10 12:59:42] 2026-01-10 11:58:40,349 | INFO     | mean x: 1768036201.0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,350 | INFO     | mean y: 2526208.770642202
[2026-01-10 12:59:42] 2026-01-10 11:58:40,350 | INFO     | intersect: 15355549649.980066
[2026-01-10 12:59:42] 2026-01-10 11:58:40,350 | INFO     | chi2: 0.9610415398715331
[2026-01-10 12:59:42] 2026-01-10 11:58:40,350 | INFO     | current chi2=0.9610415398715331 (change=21.43617746278477 %)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,351 | INFO     | left removable region: 30
[2026-01-10 12:59:42] 2026-01-10 11:58:40,351 | INFO     | sum of square deviations: 8884603792.5
[2026-01-10 12:59:42] 2026-01-10 11:58:40,354 | INFO     | sum of deviations: -47968184205.5
[2026-01-10 12:59:42] 2026-01-10 11:58:40,355 | INFO     | mean x: 1768036475.5
[2026-01-10 12:59:42] 2026-01-10 11:58:40,355 | INFO     | mean y: 2525824.388888889
[2026-01-10 12:59:42] 2026-01-10 11:58:40,355 | INFO     | intersect: 9548196213.249619
[2026-01-10 12:59:42] 2026-01-10 11:58:40,355 | INFO     | chi2: 0.15201828490094704
[2026-01-10 12:59:42] 2026-01-10 11:58:40,356 | INFO     | current memory leak: -5.40 B/s (using 306 data points, chi2=0.15)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,356 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | ..............................
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . Timing measurements:
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . get job = 0 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . initial setup = 13 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . payload setup = 157 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . stage-in = 0 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . payload execution = 21021 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,357 | INFO     | . stage-out = 5 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,358 | INFO     | . log creation = 1 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,358 | INFO     | ..............................
[2026-01-10 12:59:42] 2026-01-10 11:58:40,480 | INFO     | 
[2026-01-10 12:59:42] 2026-01-10 11:58:40,480 | INFO     | job summary report
[2026-01-10 12:59:42] 2026-01-10 11:58:40,480 | INFO     | --------------------------------------------------
[2026-01-10 12:59:42] 2026-01-10 11:58:40,480 | INFO     | PanDA job id: 6964539052
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | task id: 47898826
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | errors: (none)
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | pilot state: finished 
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | transexitcode: 0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | exeerrorcode: 0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | exeerrordiag: 
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | exitcode: 0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | exitmsg: OK
[2026-01-10 12:59:42] 2026-01-10 11:58:40,481 | INFO     | cpuconsumptiontime: 78709 s
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | nevents: 400
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | neventsw: 0
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | pid: 5866
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | pgrp: 5866
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | corecount: 8
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | event service: False
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | sizes: {0: 2283747, 1: 2283946, 12: 2283946, 23: 2283974, 33: 2284002, 44: 2284058, 55: 2284214, 66: 2284242, 76: 2284270, 87: 2284326, 98: 2284354, 109: 2284662, 
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | --------------------------------------------------
[2026-01-10 12:59:42] 2026-01-10 11:58:40,482 | INFO     | 
[2026-01-10 12:59:42] 2026-01-10 11:58:40,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 12:59:42] 2026-01-10 11:58:41,041 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,044 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:59:42] 2026-01-10 11:58:41,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,044 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:59:42] 2026-01-10 11:58:41,044 | INFO     | job 6964539052 has completed (purged errors)
[2026-01-10 12:59:42] 2026-01-10 11:58:41,044 | INFO     | overall cleanup function is called
[2026-01-10 12:59:42] 2026-01-10 11:58:42,053 | INFO     | --- collectZombieJob: --- 10, [5866]
[2026-01-10 12:59:42] 2026-01-10 11:58:42,053 | INFO     | zombie collector waiting for pid 5866
[2026-01-10 12:59:42] 2026-01-10 11:58:42,053 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:59:42] 2026-01-10 11:58:42,053 | INFO     | collected zombie processes
[2026-01-10 12:59:42] 2026-01-10 11:58:42,054 | INFO     | will attempt to kill all subprocesses of pid=5866
[2026-01-10 12:59:42] 2026-01-10 11:58:42,143 | INFO     | process IDs to be killed: [5866] (in reverse order)
[2026-01-10 12:59:42] 2026-01-10 11:58:42,980 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:59:42] 2026-01-10 11:58:42,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:59:42] 2026-01-10 11:58:42,982 | INFO     | did not find any defunct processes belonging to 5866
[2026-01-10 12:59:42] 2026-01-10 11:58:42,984 | INFO     | did not find any defunct processes belonging to 5866
[2026-01-10 12:59:42] 2026-01-10 11:58:42,984 | INFO     | ready for new job
[2026-01-10 12:59:42] 2026-01-10 11:58:42,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:59:42] 2026-01-10 11:58:42,987 | INFO     | ***************************************
[2026-01-10 12:59:42] 2026-01-10 11:58:42,987 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:59:42] 2026-01-10 11:58:42,987 | INFO     | ***************************************
[2026-01-10 12:59:42] 2026-01-10 11:58:42,987 | INFO     | 
[2026-01-10 12:59:42] 2026-01-10 11:58:42,988 | INFO     | pilot is running in a VM
[2026-01-10 12:59:42] 2026-01-10 11:58:42,988 | INFO     | architecture information:
[2026-01-10 12:59:42] 2026-01-10 11:58:43,009 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:59:42] 2026-01-10 11:58:43,199 | INFO     | cat /etc/os-release:
[2026-01-10 12:59:42] NAME="CentOS Linux"
[2026-01-10 12:59:42] VERSION="7 (Core)"
[2026-01-10 12:59:42] ID="centos"
[2026-01-10 12:59:42] ID_LIKE="rhel fedora"
[2026-01-10 12:59:42] VERSION_ID="7"
[2026-01-10 12:59:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:59:42] ANSI_COLOR="0;31"
[2026-01-10 12:59:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:59:42] HOME_URL="https://www.centos.org/"
[2026-01-10 12:59:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:59:42] 
[2026-01-10 12:59:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:59:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:59:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:59:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:59:42] 
[2026-01-10 12:59:42] 2026-01-10 11:58:43,200 | INFO     | ***************************************
[2026-01-10 12:59:42] 2026-01-10 11:58:43,703 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 12:59:42] 2026-01-10 11:58:43,985 | INFO     | sufficient remaining disk space (496732471296 B)
[2026-01-10 12:59:42] 2026-01-10 11:58:43,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:59:42] 2026-01-10 11:58:43,985 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:59:42] 2026-01-10 11:58:43,986 | INFO     | update_server=False
[2026-01-10 12:59:42] 2026-01-10 11:58:43,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:59:42] 2026-01-10 11:58:43,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:59:42] 2026-01-10 11:58:44,153 | INFO     | all payload control threads have been joined
[2026-01-10 12:59:42] 2026-01-10 11:58:44,265 | INFO     | all data control threads have been joined
[2026-01-10 12:59:42] 2026-01-10 11:58:44,780 | INFO     | all job control threads have been joined
[2026-01-10 12:59:42] 2026-01-10 11:58:44,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:59:42] 2026-01-10 11:58:44,794 | INFO     | aborting loop
[2026-01-10 12:59:42] 2026-01-10 11:58:44,992 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,005 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,102 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,159 | INFO     | [payload] control thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,191 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,271 | INFO     | [data] control thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,384 | INFO     | [job] validate thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:59:42] 2026-01-10 11:58:45,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:59:42] 2026-01-10 11:58:45,639 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,786 | INFO     | [job] control thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,800 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,991 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:45,993 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:46,484 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:46,502 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:46,550 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:58:49,402 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:59:42] 2026-01-10 11:59:13,091 | INFO     | PID=31771 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 12:59:42] 2026-01-10 11:59:13,091 | INFO     | .. there are 2 such processes running
[2026-01-10 12:59:42] 2026-01-10 11:59:13,092 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:59:42] 2026-01-10 11:59:13,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:59:42] 2026-01-10 11:59:13,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:59:42] 2026-01-10 11:59:32,191 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:59:42] 2026-01-10 11:59:34,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473718495040)>', '<ExcThread(monitor, started 140473491506944)>']
[2026-01-10 12:59:42] 2026-01-10 11:59:34,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:59:42] 2026-01-10 11:59:34,218 | INFO     | [monitor] control thread has ended
[2026-01-10 12:59:42] 2026-01-10 11:59:39,167 | INFO     | all workflow threads have been joined
[2026-01-10 12:59:42] 2026-01-10 11:59:39,167 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:59:42] 2026-01-10 11:59:39,167 | INFO     | traces error code: 0
[2026-01-10 12:59:42] 2026-01-10 11:59:39,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:59:42] 2026-01-10 11:59:39,601 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:59:42] 2026-01-10 11:59:39,730 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:59:42] 2026-01-10 11:59:39,821 [wrapper] pilotpid: 31771
[2026-01-10 12:59:42] 2026-01-10 11:59:39,939 [wrapper] Pilot exit status: 0
[2026-01-10 12:59:42] 2026-01-10 11:59:40,415 [wrapper] pandaids: 6964539052
[2026-01-10 12:59:42] 2026-01-10 11:59:41,405 [wrapper] cleanup supervisor_pilot  4747 31772
[2026-01-10 12:59:42] 2026-01-10 11:59:41,507 [wrapper] Test setup, not cleaning
[2026-01-10 12:59:42] 2026-01-10 11:59:41,603 [wrapper] apfmon messages muted
[2026-01-10 12:59:42] 2026-01-10 11:59:41,733 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:59:42] 2026-01-10 11:59:41,835 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:59:42]  *** Error codes and diagnostics ***
[2026-01-10 12:59:42]     "exeErrorCode": 0,
[2026-01-10 12:59:42]     "exeErrorDiag": "",
[2026-01-10 12:59:42]     "pilotErrorCode": 0,
[2026-01-10 12:59:42]     "pilotErrorDiag": "",
[2026-01-10 12:59:42]  *** Listing of results directory ***
[2026-01-10 12:59:42] total 439160
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-10 12:59:42] -rwx------. 1 boinc boinc     36322 Jan  9 16:59 runpilot2-wrapper.sh
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:59 queuedata.json
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc       100 Jan 10 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:59:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 06:54 run_atlas
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc       105 Jan 10 06:54 job.xml
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc      6391 Jan 10 06:54 init_data.xml
[2026-01-10 12:59:42] -rw-r--r--. 2 boinc boinc 225123556 Jan 10 06:54 EVNT.47898824._000539.pool.root.1
[2026-01-10 12:59:42] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:54 start_atlas.sh
[2026-01-10 12:59:42] drwxrwx--x. 2 boinc boinc        68 Jan 10 06:54 shared
[2026-01-10 12:59:42] -rw-r--r--. 2 boinc boinc    592395 Jan 10 06:54 input.tar.gz
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc         0 Jan 10 06:54 boinc_lockfile
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc      2518 Jan 10 06:55 pandaJob.out
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc    989374 Jan 10 06:59 agis_schedconf.cvmfs.json
[2026-01-10 12:59:42] drwx------. 5 boinc boinc      4096 Jan 10 06:59 pilot3
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc 213851562 Jan 10 12:55 HITS.47898826._039936.pool.root.1
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc       531 Jan 10 12:55 boinc_task_state.xml
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc      1012 Jan 10 12:56 memory_monitor_summary.json
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc   1516240 Jan 10 12:56 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc    561204 Jan 10 12:56 log.47898826._039936.job.log.tgz.1
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc      7780 Jan 10 12:58 heartbeat.json
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc        95 Jan 10 12:59 pilot_heartbeat.json
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc      8192 Jan 10 12:59 boinc_mmap_file
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc        28 Jan 10 12:59 wrapper_checkpoint.txt
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc      4884 Jan 10 12:59 pilotlog.txt
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc   2854384 Jan 10 12:59 log.47898826._039936.job.log.1
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc       357 Jan 10 12:59 output.list
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc       620 Jan 10 12:59 runtime_log
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc   3430400 Jan 10 12:59 result.tar.gz
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc       657 Jan 10 12:59 sdyKDmK4Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnemKDmiTewim.diag
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc      8817 Jan 10 12:59 runtime_log.err
[2026-01-10 12:59:42] -rw-r--r--. 1 boinc boinc     20761 Jan 10 12:59 stderr.txt
[2026-01-10 12:59:42] HITS file was successfully produced:
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc 213851562 Jan 10 12:55 shared/HITS.pool.root.1
[2026-01-10 12:59:42]  *** Contents of shared directory: ***
[2026-01-10 12:59:42] total 432636
[2026-01-10 12:59:42] -rw-r--r--. 2 boinc boinc 225123556 Jan 10 06:54 ATLAS.root_0
[2026-01-10 12:59:42] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:54 start_atlas.sh
[2026-01-10 12:59:42] -rw-r--r--. 2 boinc boinc    592395 Jan 10 06:54 input.tar.gz
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc 213851562 Jan 10 12:55 HITS.pool.root.1
[2026-01-10 12:59:42] -rw-------. 1 boinc boinc   3430400 Jan 10 12:59 result.tar.gz
12:59:44 (28012): run_atlas exited; CPU time 78920.217722
12:59:44 (28012): called boinc_finish(0)

</stderr_txt>
]]>

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