Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:22:59 (3474798): wrapper (7.7.26015): starting
19:22:59 (3474798): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:22:59] Arguments: --nthreads 8
[2026-01-09 19:22:59] Threads: 8
[2026-01-09 19:22:59] Checking for CVMFS
[2026-01-09 19:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:23:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:23:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:23:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:23:01] 2.13.3.0 12763 94078 149480 154962 3 136 37186207 40960001 21541 16776704 0 542260454 99.684 442815683 7364 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:23:01] CVMFS is ok
[2026-01-09 19:23:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:23:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:23:01] Further information can be found at the LHC@home message board.
[2026-01-09 19:23:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:23:01] Checking for apptainer binary...
[2026-01-09 19:23:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:23:01] Running /usr/bin/apptainer --version
[2026-01-09 19:23:01] apptainer version 1.4.5-2.el9
[2026-01-09 19:23:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:23:01] c7-2-17.aglt2.org
[2026-01-09 19:23:01] apptainer works
[2026-01-09 19:23:01] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:23:01] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:23:01] Starting ATLAS job with PandaID=6964539215
[2026-01-09 19:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:40:00]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:40:00] 2026-01-10 05:38:45,632 | INFO     | monitor loop #1261: job 0:6964539215 is in state 'finished'
[2026-01-10 00:40:00] 2026-01-10 05:38:45,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:40:00] 2026-01-10 05:38:47,495 | INFO     | time since job start (18925s) is within the limit (349056.0s)
[2026-01-10 00:40:00] 2026-01-10 05:38:48,135 | INFO     | monitor loop #1262: job 0:6964539215 is in state 'finished'
[2026-01-10 00:40:00] 2026-01-10 05:38:48,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:40:00] 2026-01-10 05:38:49,502 | INFO     | time since job start (18927s) is within the limit (349056.0s)
[2026-01-10 00:40:00] 2026-01-10 05:38:50,649 | INFO     | monitor loop #1263: job 0:6964539215 is in state 'finished'
[2026-01-10 00:40:00] 2026-01-10 05:38:50,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,512 | INFO     | time since job start (18929s) is within the limit (349056.0s)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,786 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 00:40:00] 2026-01-10 05:38:51,800 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3273.455302083332
[2026-01-10 00:40:00] 2026-01-10 05:38:51,813 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6964539215/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,813 | INFO     | extracted standard info from prmon json
[2026-01-10 00:40:00] 2026-01-10 05:38:51,813 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:40:00] 2026-01-10 05:38:51,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:40:00] 2026-01-10 05:38:51,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 00:40:00] 2026-01-10 05:38:51,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 00:40:00] 2026-01-10 05:38:51,818 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:40:00] 2026-01-10 05:38:51,818 | INFO     | sum of square deviations: 9237557727.419312
[2026-01-10 00:40:00] 2026-01-10 05:38:51,820 | INFO     | sum of deviations: -58959730984.87099
[2026-01-10 00:40:00] 2026-01-10 05:38:51,820 | INFO     | mean x: 1768014075.516129
[2026-01-10 00:40:00] 2026-01-10 05:38:51,820 | INFO     | mean y: 2539709.5741935484
[2026-01-10 00:40:00] 2026-01-10 05:38:51,820 | INFO     | intersect: 11287084536.880863
[2026-01-10 00:40:00] 2026-01-10 05:38:51,821 | INFO     | chi2: 3.4271778600614398
[2026-01-10 00:40:00] 2026-01-10 05:38:51,821 | INFO     | sum of square deviations: 8797746354.918037
[2026-01-10 00:40:00] 2026-01-10 05:38:51,823 | INFO     | sum of deviations: -38894409895.50818
[2026-01-10 00:40:00] 2026-01-10 05:38:51,823 | INFO     | mean x: 1768013923.0163934
[2026-01-10 00:40:00] 2026-01-10 05:38:51,823 | INFO     | mean y: 2546578.301639344
[2026-01-10 00:40:00] 2026-01-10 05:38:51,823 | INFO     | intersect: 7818850373.457563
[2026-01-10 00:40:00] 2026-01-10 05:38:51,823 | INFO     | chi2: 2.7587697159916234
[2026-01-10 00:40:00] 2026-01-10 05:38:51,824 | INFO     | current chi2=2.7587697159916234 (change=19.503164742603516 %)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,824 | INFO     | right removable region: 304
[2026-01-10 00:40:00] 2026-01-10 05:38:51,824 | INFO     | sum of square deviations: 8797743304.91804
[2026-01-10 00:40:00] 2026-01-10 05:38:51,826 | INFO     | sum of deviations: -127745176395.18036
[2026-01-10 00:40:00] 2026-01-10 05:38:51,826 | INFO     | mean x: 1768014228.0163934
[2026-01-10 00:40:00] 2026-01-10 05:38:51,826 | INFO     | mean y: 2563458.4360655737
[2026-01-10 00:40:00] 2026-01-10 05:38:51,826 | INFO     | intersect: 25674520641.011185
[2026-01-10 00:40:00] 2026-01-10 05:38:51,826 | INFO     | chi2: 1.2670597431534973
[2026-01-10 00:40:00] 2026-01-10 05:38:51,826 | INFO     | current chi2=1.2670597431534973 (change=63.02906371101551 %)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,827 | INFO     | sum of square deviations: 8372115194.916687
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | sum of deviations: -128363558090.41669
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | mean x: 1768014380.5166667
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | mean y: 2563657.783333333
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | intersect: 27110243300.789204
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | chi2: 1.2354420914473607
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | current chi2=1.2354420914473607 (change=2.495356030130484 %)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | left removable region: 20
[2026-01-10 00:40:00] 2026-01-10 05:38:51,829 | INFO     | sum of square deviations: 7102732034.912014
[2026-01-10 00:40:00] 2026-01-10 05:38:51,831 | INFO     | sum of deviations: -82426857933.51064
[2026-01-10 00:40:00] 2026-01-10 05:38:51,831 | INFO     | mean x: 1768014502.5176055
[2026-01-10 00:40:00] 2026-01-10 05:38:51,831 | INFO     | mean y: 2561372.602112676
[2026-01-10 00:40:00] 2026-01-10 05:38:51,831 | INFO     | intersect: 20520283216.406742
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | chi2: 0.5025184768876337
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | current memory leak: -11.60 B/s (using 284 data points, chi2=0.50)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | could have reported an average CPU frequency of 3261 MHz (14 samples)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | ..............................
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | . Timing measurements:
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | . get job = 0 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | . initial setup = 2 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,832 | INFO     | . payload setup = 18 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,833 | INFO     | . stage-in = 0 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,833 | INFO     | . payload execution = 18875 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,833 | INFO     | . stage-out = 2 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,833 | INFO     | . log creation = 0 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,833 | INFO     | ..............................
[2026-01-10 00:40:00] 2026-01-10 05:38:51,934 | INFO     | 
[2026-01-10 00:40:00] 2026-01-10 05:38:51,934 | INFO     | job summary report
[2026-01-10 00:40:00] 2026-01-10 05:38:51,934 | INFO     | --------------------------------------------------
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | PanDA job id: 6964539215
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | task id: 47898826
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | errors: (none)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | pilot state: finished 
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | transexitcode: 0
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | exeerrorcode: 0
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | exeerrordiag: 
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | exitcode: 0
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | exitmsg: OK
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | cpuconsumptiontime: 43089 s
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | nevents: 400
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | neventsw: 0
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | pid: 3485618
[2026-01-10 00:40:00] 2026-01-10 05:38:51,935 | INFO     | pgrp: 3485618
[2026-01-10 00:40:00] 2026-01-10 05:38:51,936 | INFO     | corecount: 8
[2026-01-10 00:40:00] 2026-01-10 05:38:51,936 | INFO     | event service: False
[2026-01-10 00:40:00] 2026-01-10 05:38:51,936 | INFO     | sizes: {0: 2283693, 1: 2283948, 10: 2284210, 12: 2284238, 18898: 2317318, 18902: 2326500, 18910: 2326638}
[2026-01-10 00:40:00] 2026-01-10 05:38:51,936 | INFO     | --------------------------------------------------
[2026-01-10 00:40:00] 2026-01-10 05:38:51,936 | INFO     | 
[2026-01-10 00:40:00] 2026-01-10 05:38:51,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 00:40:00] 2026-01-10 05:38:51,961 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,961 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,961 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,963 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,963 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:40:00] 2026-01-10 05:38:51,963 | INFO     | job 6964539215 has completed (purged errors)
[2026-01-10 00:40:00] 2026-01-10 05:38:51,963 | INFO     | overall cleanup function is called
[2026-01-10 00:40:00] 2026-01-10 05:38:52,971 | INFO     | --- collectZombieJob: --- 10, [3485618]
[2026-01-10 00:40:00] 2026-01-10 05:38:52,972 | INFO     | zombie collector waiting for pid 3485618
[2026-01-10 00:40:00] 2026-01-10 05:38:52,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:40:00] 2026-01-10 05:38:52,972 | INFO     | collected zombie processes
[2026-01-10 00:40:00] 2026-01-10 05:38:52,972 | INFO     | will attempt to kill all subprocesses of pid=3485618
[2026-01-10 00:40:00] 2026-01-10 05:38:53,387 | INFO     | process IDs to be killed: [3485618] (in reverse order)
[2026-01-10 00:40:00] 2026-01-10 05:38:53,514 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:40:00] 2026-01-10 05:38:53,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:40:00] 2026-01-10 05:38:53,531 | INFO     | did not find any defunct processes belonging to 3485618
[2026-01-10 00:40:00] 2026-01-10 05:38:53,547 | INFO     | did not find any defunct processes belonging to 3485618
[2026-01-10 00:40:00] 2026-01-10 05:38:53,547 | INFO     | ready for new job
[2026-01-10 00:40:00] 2026-01-10 05:38:53,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:40:00] 2026-01-10 05:38:53,550 | INFO     | ***************************************
[2026-01-10 00:40:00] 2026-01-10 05:38:53,550 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:40:00] 2026-01-10 05:38:53,551 | INFO     | ***************************************
[2026-01-10 00:40:00] 2026-01-10 05:38:53,551 | INFO     | 
[2026-01-10 00:40:00] 2026-01-10 05:38:53,556 | INFO     | architecture information:
[2026-01-10 00:40:00] 2026-01-10 05:38:53,556 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:40:00] 2026-01-10 05:38:53,577 | INFO     | cat /etc/os-release:
[2026-01-10 00:40:00] NAME="CentOS Linux"
[2026-01-10 00:40:00] VERSION="7 (Core)"
[2026-01-10 00:40:00] ID="centos"
[2026-01-10 00:40:00] ID_LIKE="rhel fedora"
[2026-01-10 00:40:00] VERSION_ID="7"
[2026-01-10 00:40:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:40:00] ANSI_COLOR="0;31"
[2026-01-10 00:40:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:40:00] HOME_URL="https://www.centos.org/"
[2026-01-10 00:40:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:40:00] 
[2026-01-10 00:40:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:40:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:40:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:40:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:40:00] 
[2026-01-10 00:40:00] 2026-01-10 05:38:53,578 | INFO     | ***************************************
[2026-01-10 00:40:00] 2026-01-10 05:38:54,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 00:40:00] 2026-01-10 05:38:54,113 | INFO     | sufficient remaining disk space (127138791424 B)
[2026-01-10 00:40:00] 2026-01-10 05:38:54,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:40:00] 2026-01-10 05:38:54,114 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:40:00] 2026-01-10 05:38:54,114 | INFO     | update_server=False
[2026-01-10 00:40:00] 2026-01-10 05:38:54,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:40:00] 2026-01-10 05:38:54,133 | INFO     | all payload control threads have been joined
[2026-01-10 00:40:00] 2026-01-10 05:38:54,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:40:00] 2026-01-10 05:38:54,166 | INFO     | aborting loop
[2026-01-10 00:40:00] 2026-01-10 05:38:54,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:40:00] 2026-01-10 05:38:54,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:40:00] 2026-01-10 05:38:54,967 | INFO     | all data control threads have been joined
[2026-01-10 00:40:00] 2026-01-10 05:38:55,120 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,139 | INFO     | [payload] control thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,170 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,305 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,672 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,723 | INFO     | all job control threads have been joined
[2026-01-10 00:40:00] 2026-01-10 05:38:55,756 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,889 | INFO     | [job] validate thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,906 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:55,973 | INFO     | [data] control thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:56,015 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:56,290 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:56,388 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:56,569 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:56,730 | INFO     | [job] control thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:56,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:40:00] 2026-01-10 05:38:57,925 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:38:58,745 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:40:00] 2026-01-10 05:39:25,140 | INFO     | PID=3478511 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:40:00] 2026-01-10 05:39:25,141 | INFO     | .. there are 15 such processes running
[2026-01-10 00:40:00] 2026-01-10 05:39:25,142 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:40:00] 2026-01-10 05:39:25,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:40:00] 2026-01-10 05:39:25,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:40:00] 2026-01-10 05:39:53,887 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:40:00] 2026-01-10 05:39:54,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140257230923584)>', '<ExcThread(monitor, started 140256351336192)>']
[2026-01-10 00:40:00] 2026-01-10 05:39:55,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:40:00] 2026-01-10 05:39:55,313 | INFO     | [monitor] control thread has ended
[2026-01-10 00:40:00] 2026-01-10 05:39:59,903 | INFO     | all workflow threads have been joined
[2026-01-10 00:40:00] 2026-01-10 05:39:59,906 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:40:00] 2026-01-10 05:39:59,906 | INFO     | traces error code: 0
[2026-01-10 00:40:00] 2026-01-10 05:39:59,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:40:00] 2026-01-10 05:40:00,047 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:40:00] 2026-01-10 05:40:00,050 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:40:00] 2026-01-10 05:40:00,055 [wrapper] pilotpid: 3478511
[2026-01-10 00:40:00] 2026-01-10 05:40:00,057 [wrapper] Pilot exit status: 0
[2026-01-10 00:40:00] 2026-01-10 05:40:00,107 [wrapper] pandaids: 6964539215
[2026-01-10 00:40:00] 2026-01-10 05:40:00,249 [wrapper] cleanup supervisor_pilot   33019 3478512
[2026-01-10 00:40:00] 2026-01-10 05:40:00,252 [wrapper] Test setup, not cleaning
[2026-01-10 00:40:00] 2026-01-10 05:40:00,255 [wrapper] apfmon messages muted
[2026-01-10 00:40:00] 2026-01-10 05:40:00,257 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:40:00] 2026-01-10 05:40:00,260 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:40:00]  *** Error codes and diagnostics ***
[2026-01-10 00:40:00]     "exeErrorCode": 0,
[2026-01-10 00:40:00]     "exeErrorDiag": "",
[2026-01-10 00:40:00]     "pilotErrorCode": 0,
[2026-01-10 00:40:00]     "pilotErrorDiag": "",
[2026-01-10 00:40:00]  *** Listing of results directory ***
[2026-01-10 00:40:00] total 445848
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-10 00:40:00] -rwx------. 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:40:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:22 run_atlas
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:22 job.xml
[2026-01-10 00:40:00] -rw-r--r--. 2 boincer umatlas 224821519 Jan  9 19:22 EVNT.47898824._001443.pool.root.1
[2026-01-10 00:40:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:22 start_atlas.sh
[2026-01-10 00:40:00] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:22 shared
[2026-01-10 00:40:00] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 19:22 input.tar.gz
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:22 boinc_lockfile
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 19:23 pandaJob.out
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas        57 Jan  9 19:23 setup.sh.local
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas    989374 Jan  9 19:23 agis_schedconf.cvmfs.json
[2026-01-10 00:40:00] drwx------. 5 boincer umatlas      4096 Jan  9 19:23 pilot3
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas       531 Jan 10 00:37 boinc_task_state.xml
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas 221717052 Jan 10 00:37 HITS.47898826._040099.pool.root.1
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas      6946 Jan 10 00:38 init_data.xml
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas      1042 Jan 10 00:38 memory_monitor_summary.json
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:38 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas    526828 Jan 10 00:38 log.47898826._040099.job.log.tgz.1
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas      7791 Jan 10 00:38 heartbeat.json
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas        95 Jan 10 00:39 pilot_heartbeat.json
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas        28 Jan 10 00:39 wrapper_checkpoint.txt
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:39 boinc_mmap_file
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas      4825 Jan 10 00:39 pilotlog.txt
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas   2520116 Jan 10 00:40 log.47898826._040099.job.log.1
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas       357 Jan 10 00:40 output.list
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:40 runtime_log
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas   3061760 Jan 10 00:40 result.tar.gz
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 00:40 runtime_log.err
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas       659 Jan 10 00:40 dFlNDmP1Ty8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRemKDmfUHImm.diag
[2026-01-10 00:40:00] -rw-r--r--. 1 boincer umatlas     16451 Jan 10 00:40 stderr.txt
[2026-01-10 00:40:00] HITS file was successfully produced:
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas 221717052 Jan 10 00:37 shared/HITS.pool.root.1
[2026-01-10 00:40:00]  *** Contents of shared directory: ***
[2026-01-10 00:40:00] total 439676
[2026-01-10 00:40:00] -rw-r--r--. 2 boincer umatlas 224821519 Jan  9 19:22 ATLAS.root_0
[2026-01-10 00:40:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:22 start_atlas.sh
[2026-01-10 00:40:00] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 19:22 input.tar.gz
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas 221717052 Jan 10 00:37 HITS.pool.root.1
[2026-01-10 00:40:00] -rw-------. 1 boincer umatlas   3061760 Jan 10 00:40 result.tar.gz
00:40:02 (3474798): run_atlas exited; CPU time 43683.831105
00:40:02 (3474798): called boinc_finish(0)

</stderr_txt>
]]>

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