Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:54:12 (3996987): wrapper (7.7.26015): starting
13:54:12 (3996987): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 13:54:12] Arguments: --nthreads 4
[2026-01-10 13:54:12] Threads: 4
[2026-01-10 13:54:12] Checking for CVMFS
[2026-01-10 13:54:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:54:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:54:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:54:13] 2.13.1.0 2043096 4139 80300 154980 1 188 6061060 10240000 911 130560 0 4758354 99.992 154021 305 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-10 13:54:13] CVMFS is ok
[2026-01-10 13:54:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:54:13] Checking for apptainer binary...
[2026-01-10 13:54:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:54:13] Running /usr/bin/apptainer --version
[2026-01-10 13:54:13] apptainer version 1.4.5
[2026-01-10 13:54:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:54:14] atlas7l1
[2026-01-10 13:54:14] apptainer works
[2026-01-10 13:54:14] Set ATHENA_PROC_NUMBER=4
[2026-01-10 13:54:14] Set ATHENA_CORE_NUMBER=4
[2026-01-10 13:54:14] Starting ATLAS job with PandaID=6962918147
[2026-01-10 13:54:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:57:56]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:57:56] 2026-01-10 14:57:20,545 | INFO     | executing command: lscpu
[2026-01-10 15:57:56] 2026-01-10 14:57:20,565 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 15:57:56] 2026-01-10 14:57:20,752 | INFO     | time since job start (7379s) is within the limit (174528.0s)
[2026-01-10 15:57:56] 2026-01-10 14:57:20,752 | INFO     | 7381s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 15:57:56] 2026-01-10 14:57:22,756 | INFO     | time since job start (7381s) is within the limit (174528.0s)
[2026-01-10 15:57:56] 2026-01-10 14:57:22,822 | INFO     | monitor loop #564: job 0:6962918147 is in state 'finished'
[2026-01-10 15:57:56] 2026-01-10 14:57:22,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,814 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 15:57:56] 2026-01-10 14:57:23,814 | INFO     | found 16 cores (1 core per socket, 16 sockets) , CPU MHz: 2400.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,816 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6962918147/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,816 | INFO     | extracted standard info from prmon json
[2026-01-10 15:57:56] 2026-01-10 14:57:23,817 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:57:56] 2026-01-10 14:57:23,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:57:56] 2026-01-10 14:57:23,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 15:57:56] 2026-01-10 14:57:23,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 15:57:56] 2026-01-10 14:57:23,818 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:57:56] 2026-01-10 14:57:23,818 | INFO     | sum of square deviations: 549294020.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | sum of deviations: 10900139532.000002
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | mean x: 1768053341.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | mean y: 2327731.6694214875
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | intersect: -35082758606.82518
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | chi2: 1.712380585543819
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,819 | INFO     | sum of deviations: 10572141098.500004
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | mean x: 1768053188.5
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | mean y: 2326965.577586207
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | intersect: -38619975548.79446
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | chi2: 1.7158275474016995
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | current chi2=1.7158275474016995 (change=-0.2012964808746548 %)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | right removable region: 115
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | sum of square deviations: 483971865.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | sum of deviations: -7668518711.500002
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | mean x: 1768053493.5
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | mean y: 2370295.0948275863
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | intersect: 28017121313.39565
[2026-01-10 15:57:56] 2026-01-10 14:57:23,820 | INFO     | chi2: 0.05286734688194012
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | current chi2=0.05286734688194012 (change=96.91264037164083 %)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | sum of square deviations: 424045160.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | sum of deviations: -6010084597.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | mean x: 1768053646.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | mean y: 2366019.3873873875
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | intersect: 25061376207.109585
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | chi2: 0.048160633361639886
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | current chi2=0.048160633361639886 (change=8.902874454454764 %)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | left removable region: 20
[2026-01-10 15:57:56] 2026-01-10 14:57:23,821 | INFO     | sum of square deviations: 265828240.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | sum of deviations: -521431172.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | mean x: 1768053768.0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | mean y: 2350486.7684210525
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | intersect: 3470448339.7552075
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | chi2: 0.014431991757645823
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | current memory leak: -1.96 B/s (using 95 data points, chi2=0.01)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | ..............................
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | . Timing measurements:
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | . get job = 0 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | . initial setup = 1 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | . payload setup = 3 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,822 | INFO     | . stage-in = 0 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,823 | INFO     | . payload execution = 7354 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,823 | INFO     | . stage-out = 0 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,823 | INFO     | . log creation = 0 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,823 | INFO     | ..............................
[2026-01-10 15:57:56] 2026-01-10 14:57:23,880 | INFO     | 
[2026-01-10 15:57:56] 2026-01-10 14:57:23,880 | INFO     | job summary report
[2026-01-10 15:57:56] 2026-01-10 14:57:23,880 | INFO     | --------------------------------------------------
[2026-01-10 15:57:56] 2026-01-10 14:57:23,880 | INFO     | PanDA job id: 6962918147
[2026-01-10 15:57:56] 2026-01-10 14:57:23,880 | INFO     | task id: 47898826
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | errors: (none)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | pilot state: finished 
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | transexitcode: 0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | exeerrorcode: 0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | exeerrordiag: 
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | exitcode: 0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | exitmsg: OK
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | cpuconsumptiontime: 28077 s
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | nevents: 400
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | neventsw: 0
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | pid: 4007318
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | pgrp: 4007318
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | corecount: 4
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | event service: False
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | sizes: {0: 2283812, 1: 2284011, 3: 2284273, 11: 2284301, 7361: 2320808, 7365: 2320808, 7369: 2321130}
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | --------------------------------------------------
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | 
[2026-01-10 15:57:56] 2026-01-10 14:57:23,881 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | job 6962918147 has completed (purged errors)
[2026-01-10 15:57:56] 2026-01-10 14:57:23,894 | INFO     | overall cleanup function is called
[2026-01-10 15:57:56] 2026-01-10 14:57:24,901 | INFO     | --- collectZombieJob: --- 10, [4007318]
[2026-01-10 15:57:56] 2026-01-10 14:57:24,901 | INFO     | zombie collector waiting for pid 4007318
[2026-01-10 15:57:56] 2026-01-10 14:57:24,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:57:56] 2026-01-10 14:57:24,901 | INFO     | collected zombie processes
[2026-01-10 15:57:56] 2026-01-10 14:57:24,901 | INFO     | will attempt to kill all subprocesses of pid=4007318
[2026-01-10 15:57:56] 2026-01-10 14:57:24,994 | INFO     | process IDs to be killed: [4007318] (in reverse order)
[2026-01-10 15:57:56] 2026-01-10 14:57:25,023 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:57:56] 2026-01-10 14:57:25,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:57:56] 2026-01-10 14:57:25,030 | INFO     | did not find any defunct processes belonging to 4007318
[2026-01-10 15:57:56] 2026-01-10 14:57:25,034 | INFO     | did not find any defunct processes belonging to 4007318
[2026-01-10 15:57:56] 2026-01-10 14:57:25,034 | INFO     | ready for new job
[2026-01-10 15:57:56] 2026-01-10 14:57:25,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:57:56] 2026-01-10 14:57:25,035 | INFO     | ***************************************
[2026-01-10 15:57:56] 2026-01-10 14:57:25,035 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:57:56] 2026-01-10 14:57:25,035 | INFO     | ***************************************
[2026-01-10 15:57:56] 2026-01-10 14:57:25,035 | INFO     | 
[2026-01-10 15:57:56] 2026-01-10 14:57:25,035 | INFO     | pilot is running in a VM
[2026-01-10 15:57:56] 2026-01-10 14:57:25,035 | INFO     | architecture information:
[2026-01-10 15:57:56] 2026-01-10 14:57:25,036 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:57:56] 2026-01-10 14:57:25,043 | INFO     | cat /etc/os-release:
[2026-01-10 15:57:56] NAME="CentOS Linux"
[2026-01-10 15:57:56] VERSION="7 (Core)"
[2026-01-10 15:57:56] ID="centos"
[2026-01-10 15:57:56] ID_LIKE="rhel fedora"
[2026-01-10 15:57:56] VERSION_ID="7"
[2026-01-10 15:57:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:57:56] ANSI_COLOR="0;31"
[2026-01-10 15:57:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:57:56] HOME_URL="https://www.centos.org/"
[2026-01-10 15:57:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:57:56] 
[2026-01-10 15:57:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:57:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:57:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:57:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:57:56] 
[2026-01-10 15:57:56] 2026-01-10 14:57:25,043 | INFO     | ***************************************
[2026-01-10 15:57:56] 2026-01-10 14:57:25,546 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-01-10 15:57:56] 2026-01-10 14:57:25,557 | INFO     | sufficient remaining disk space (153279791104 B)
[2026-01-10 15:57:56] 2026-01-10 14:57:25,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:57:56] 2026-01-10 14:57:25,557 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:57:56] 2026-01-10 14:57:25,557 | INFO     | update_server=False
[2026-01-10 15:57:56] 2026-01-10 14:57:25,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:57:56] 2026-01-10 14:57:25,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:57:56] 2026-01-10 14:57:25,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:57:56] 2026-01-10 14:57:26,130 | INFO     | all job control threads have been joined
[2026-01-10 15:57:56] 2026-01-10 14:57:26,161 | INFO     | all data control threads have been joined
[2026-01-10 15:57:56] 2026-01-10 14:57:26,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:57:56] 2026-01-10 14:57:26,339 | INFO     | aborting loop
[2026-01-10 15:57:56] 2026-01-10 14:57:26,424 | INFO     | all payload control threads have been joined
[2026-01-10 15:57:56] 2026-01-10 14:57:26,563 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:26,563 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:26,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:57:56] 2026-01-10 14:57:26,911 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:26,987 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,117 | INFO     | [job] validate thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,135 | INFO     | [job] control thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,166 | INFO     | [data] control thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,290 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,344 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,386 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,425 | INFO     | [payload] control thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:27,606 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:28,055 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:28,859 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:29,608 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:31,244 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:57:56] 2026-01-10 14:57:36,442 | INFO     | job.realtimelogging is not enabled
[2026-01-10 15:57:56] 2026-01-10 14:57:37,448 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:57:56] 2026-01-10 14:57:39,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127054478370624)>', '<ExcThread(monitor, started 127053722547968)>']
[2026-01-10 15:57:56] 2026-01-10 14:57:44,026 | INFO     | all workflow threads have been joined
[2026-01-10 15:57:56] 2026-01-10 14:57:44,027 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:57:56] 2026-01-10 14:57:44,027 | INFO     | traces error code: 0
[2026-01-10 15:57:56] 2026-01-10 14:57:44,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | INFO     | PID=4000781 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | INFO     | .. there are 2 such processes running
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:57:56] 2026-01-10 14:57:55,947 | INFO     | [monitor] control thread has ended
[2026-01-10 15:57:56] 2026-01-10 14:57:56,010 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:57:56] 2026-01-10 14:57:56,013 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:57:56] 2026-01-10 14:57:56,018 [wrapper] pilotpid: 4000781
[2026-01-10 15:57:56] 2026-01-10 14:57:56,022 [wrapper] Pilot exit status: 0
[2026-01-10 15:57:56] 2026-01-10 14:57:56,034 [wrapper] pandaids: 6962918147
[2026-01-10 15:57:56] 2026-01-10 14:57:56,062 [wrapper] cleanup supervisor_pilot 4051169 4000782
[2026-01-10 15:57:56] 2026-01-10 14:57:56,067 [wrapper] Test setup, not cleaning
[2026-01-10 15:57:56] 2026-01-10 14:57:56,072 [wrapper] apfmon messages muted
[2026-01-10 15:57:56] 2026-01-10 14:57:56,077 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:57:56] 2026-01-10 14:57:56,079 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:57:56]  *** Error codes and diagnostics ***
[2026-01-10 15:57:56]     "exeErrorCode": 0,
[2026-01-10 15:57:56]     "exeErrorDiag": "",
[2026-01-10 15:57:56]     "pilotErrorCode": 0,
[2026-01-10 15:57:56]     "pilotErrorDiag": "",
[2026-01-10 15:57:56]  *** Listing of results directory ***
[2026-01-10 15:57:56] insgesamt 441460
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-10 15:57:56] -rwx------ 1 yeti boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc       100 Jan 10 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:57:56] -rwxr-xr-x 1 yeti boinc      7986 Jan 10 13:54 run_atlas
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc       105 Jan 10 13:54 job.xml
[2026-01-10 15:57:56] -rw-r--r-- 2 yeti boinc 225931031 Jan 10 13:54 EVNT.47898824._000784.pool.root.1
[2026-01-10 15:57:56] -rw-r--r-- 2 yeti boinc     15847 Jan 10 13:54 start_atlas.sh
[2026-01-10 15:57:56] drwxrwx--x 2 yeti boinc      4096 Jan 10 13:54 shared
[2026-01-10 15:57:56] -rw-r--r-- 2 yeti boinc    592398 Jan 10 13:54 input.tar.gz
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc      6616 Jan 10 13:54 init_data.xml
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc         0 Jan 10 13:54 boinc_setup_complete
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc         0 Jan 10 13:54 boinc_lockfile
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc      2519 Jan 10 13:54 pandaJob.out
[2026-01-10 15:57:56] -rw------- 1 yeti boinc        52 Jan 10 13:54 setup.sh.local
[2026-01-10 15:57:56] -rw------- 1 yeti boinc    989556 Jan 10 13:54 agis_schedconf.cvmfs.json
[2026-01-10 15:57:56] -rw------- 1 yeti boinc   1516240 Jan 10 13:54 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:57:56] drwx------ 5 yeti boinc      4096 Jan 10 13:54 pilot3
[2026-01-10 15:57:56] -rw------- 1 yeti boinc 219395358 Jan 10 15:56 HITS.47898826._020218.pool.root.1
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc       529 Jan 10 15:56 boinc_task_state.xml
[2026-01-10 15:57:56] -rw------- 1 yeti boinc      1029 Jan 10 15:57 memory_monitor_summary.json
[2026-01-10 15:57:56] -rw------- 1 yeti boinc        95 Jan 10 15:57 pilot_heartbeat.json
[2026-01-10 15:57:56] -rw------- 1 yeti boinc    313450 Jan 10 15:57 log.47898826._020218.job.log.tgz.1
[2026-01-10 15:57:56] -rw------- 1 yeti boinc      7771 Jan 10 15:57 heartbeat.json
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc      8192 Jan 10 15:57 boinc_mmap_file
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc        27 Jan 10 15:57 wrapper_checkpoint.txt
[2026-01-10 15:57:56] -rw------- 1 yeti boinc       822 Jan 10 15:57 pilotlog.txt
[2026-01-10 15:57:56] -rw------- 1 yeti boinc   1094560 Jan 10 15:57 log.47898826._020218.job.log.1
[2026-01-10 15:57:56] -rw------- 1 yeti boinc       357 Jan 10 15:57 output.list
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc       620 Jan 10 15:57 runtime_log
[2026-01-10 15:57:56] -rw------- 1 yeti boinc   1423360 Jan 10 15:57 result.tar.gz
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc      9545 Jan 10 15:57 runtime_log.err
[2026-01-10 15:57:56] -rw------- 1 yeti boinc       639 Jan 10 15:57 BSsLDmNB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpVeKDmOp7qHm.diag
[2026-01-10 15:57:56] -rw-r--r-- 1 yeti boinc     21028 Jan 10 15:57 stderr.txt
[2026-01-10 15:57:56] HITS file was successfully produced:
[2026-01-10 15:57:56] -rw------- 1 yeti boinc 219395358 Jan 10 15:56 shared/HITS.pool.root.1
[2026-01-10 15:57:56]  *** Contents of shared directory: ***
[2026-01-10 15:57:56] insgesamt 436888
[2026-01-10 15:57:56] -rw-r--r-- 2 yeti boinc 225931031 Jan 10 13:54 ATLAS.root_0
[2026-01-10 15:57:56] -rw-r--r-- 2 yeti boinc     15847 Jan 10 13:54 start_atlas.sh
[2026-01-10 15:57:56] -rw-r--r-- 2 yeti boinc    592398 Jan 10 13:54 input.tar.gz
[2026-01-10 15:57:56] -rw------- 1 yeti boinc 219395358 Jan 10 15:56 HITS.pool.root.1
[2026-01-10 15:57:56] -rw------- 1 yeti boinc   1423360 Jan 10 15:57 result.tar.gz
15:57:57 (3996987): run_atlas exited; CPU time 28168.566457
15:57:57 (3996987): called boinc_finish(0)

</stderr_txt>
]]>

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