Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:35:04 (31159): wrapper (7.7.26015): starting
18:35:04 (31159): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 18:35:04] Arguments: --nthreads 12
[2026-01-09 18:35:04] Threads: 12
[2026-01-09 18:35:04] Checking for CVMFS
[2026-01-09 18:35:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:35:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:35:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:35:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:35:04] 2.11.2.0 25590 252390 94608 154961 3 58 13523064 20275200 1 130560 2 119896254 99.950 11490575 25800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:35:04] CVMFS is ok
[2026-01-09 18:35:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:35:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:35:04] Further information can be found at the LHC@home message board.
[2026-01-09 18:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:35:04] Checking for apptainer binary...
[2026-01-09 18:35:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:35:04] Running /usr/bin/apptainer --version
[2026-01-09 18:35:04] apptainer version 1.3.2-1.el7
[2026-01-09 18:35:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:35:06] c-205-24.aglt2.org
[2026-01-09 18:35:06] apptainer works
[2026-01-09 18:35:06] Set ATHENA_PROC_NUMBER=12
[2026-01-09 18:35:06] Set ATHENA_CORE_NUMBER=12
[2026-01-09 18:35:06] Starting ATLAS job with PandaID=6964539063
[2026-01-09 18:35:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:16:37]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:16:37]  replicas=None
[2026-01-09 20:16:37]  scope=mc23_13p6TeV
[2026-01-09 20:16:37]  status=None
[2026-01-09 20:16:37]  status_code=0
[2026-01-09 20:16:37]  storage_token=
[2026-01-09 20:16:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6964539063/log.47898826._039947.job.log.tgz.1
[2026-01-09 20:16:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/8f/log.47898826._039947.job.log.tgz.1
[2026-01-09 20:16:37]  workdir=None
[2026-01-09 20:16:37] ]
[2026-01-09 20:16:37] 2026-01-10 01:15:24,874 | INFO     | transferring file log.47898826._039947.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6964539063/log.47898826._039947.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 20:16:37] 2026-01-10 01:15:24,874 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6964539063/log.47898826._039947.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._039947.job
[2026-01-09 20:16:37] 2026-01-10 01:15:24,895 | INFO     | adding to output.list: log.47898826._039947.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/8f/log.47898826._039947.job.log.tg
[2026-01-09 20:16:37] 2026-01-10 01:15:24,896 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 20:16:37] 2026-01-10 01:15:24,896 | INFO     | summary of transferred files:
[2026-01-09 20:16:37] 2026-01-10 01:15:24,897 | INFO     |  -- lfn=log.47898826._039947.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 20:16:37] 2026-01-10 01:15:24,897 | INFO     | stage-out finished correctly
[2026-01-09 20:16:37] 2026-01-10 01:15:26,138 | INFO     | time since job start (6005s) is within the limit (349056.0s)
[2026-01-09 20:16:37] 2026-01-10 01:15:26,770 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 20:16:37] 2026-01-10 01:15:28,144 | INFO     | time since job start (6007s) is within the limit (349056.0s)
[2026-01-09 20:16:37] 2026-01-10 01:15:28,421 | WARNING  | process 9745 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 20:16:37] 2026-01-10 01:15:28,421 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539063/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:16:37] 2026-01-10 01:15:28,505 | INFO     | number of running child processes to parent process 9745: 1
[2026-01-09 20:16:37] 2026-01-10 01:15:28,505 | INFO     | maximum number of monitored processes: 6
[2026-01-09 20:16:37] 2026-01-10 01:15:28,559 | INFO     | job 6964539063 has state=finished
[2026-01-09 20:16:37] 2026-01-10 01:15:28,559 | INFO     | preparing for final server update for job 6964539063 in state='finished'
[2026-01-09 20:16:37] 2026-01-10 01:15:28,560 | INFO     | this job has now completed (state=finished)
[2026-01-09 20:16:37] 2026-01-10 01:15:28,560 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 20:16:37] 2026-01-10 01:15:28,560 | INFO     | log transfer has been attempted: DONE
[2026-01-09 20:16:37] 2026-01-10 01:15:28,560 | INFO     | job 6964539063 has finished - writing final server update
[2026-01-09 20:16:37] 2026-01-10 01:15:28,561 | INFO     | total number of processed events: 400 (read)
[2026-01-09 20:16:37] 2026-01-10 01:15:28,561 | INFO     | executing command: lscpu
[2026-01-09 20:16:37] 2026-01-10 01:15:28,588 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 20:16:37] 2026-01-10 01:15:30,150 | INFO     | time since job start (6009s) is within the limit (349056.0s)
[2026-01-09 20:16:37] 2026-01-10 01:15:31,008 | INFO     | monitor loop #444: job 0:6964539063 is in state 'finished'
[2026-01-09 20:16:37] 2026-01-10 01:15:31,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:16:37] 2026-01-10 01:15:32,160 | INFO     | time since job start (6011s) is within the limit (349056.0s)
[2026-01-09 20:16:37] 2026-01-10 01:15:33,511 | INFO     | monitor loop #445: job 0:6964539063 is in state 'finished'
[2026-01-09 20:16:37] 2026-01-10 01:15:33,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:16:37] 2026-01-10 01:15:34,166 | INFO     | time since job start (6013s) is within the limit (349056.0s)
[2026-01-09 20:16:37] 2026-01-10 01:15:34,499 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 20:16:37] 2026-01-10 01:15:34,503 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-09 20:16:37] 2026-01-10 01:15:34,506 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6964539063/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:16:37] 2026-01-10 01:15:34,507 | INFO     | extracted standard info from prmon json
[2026-01-09 20:16:37] 2026-01-10 01:15:34,507 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:16:37] 2026-01-10 01:15:34,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:16:37] 2026-01-10 01:15:34,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:16:37] 2026-01-10 01:15:34,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:16:37] 2026-01-10 01:15:34,510 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:16:37] 2026-01-10 01:15:34,510 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 20:16:37] 2026-01-10 01:15:34,511 | INFO     | sum of deviations: -14036407196.0
[2026-01-09 20:16:37] 2026-01-10 01:15:34,511 | INFO     | mean x: 1768004800.0
[2026-01-09 20:16:37] 2026-01-10 01:15:34,511 | INFO     | mean y: 2788072.8791208793
[2026-01-09 20:16:37] 2026-01-10 01:15:34,511 | INFO     | intersect: 106218617614.53966
[2026-01-09 20:16:37] 2026-01-10 01:15:34,511 | INFO     | chi2: 0.08056139571777873
[2026-01-09 20:16:37] 2026-01-10 01:15:34,511 | INFO     | current memory leak: -60.08 B/s (using 91 data points, chi2=0.08)
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | could have reported an average CPU frequency of 2125 MHz (7 samples)
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | ..............................
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | . Timing measurements:
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | . get job = 0 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | . initial setup = 2 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | . payload setup = 7 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,512 | INFO     | . stage-in = 0 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,513 | INFO     | . payload execution = 5975 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,513 | INFO     | . stage-out = 0 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,513 | INFO     | . log creation = 0 s
[2026-01-09 20:16:37] 2026-01-10 01:15:34,513 | INFO     | ..............................
[2026-01-09 20:16:37] 2026-01-10 01:15:35,034 | INFO     | 
[2026-01-09 20:16:37] 2026-01-10 01:15:35,034 | INFO     | job summary report
[2026-01-09 20:16:37] 2026-01-10 01:15:35,034 | INFO     | --------------------------------------------------
[2026-01-09 20:16:37] 2026-01-10 01:15:35,034 | INFO     | PanDA job id: 6964539063
[2026-01-09 20:16:37] 2026-01-10 01:15:35,034 | INFO     | task id: 47898826
[2026-01-09 20:16:37] 2026-01-10 01:15:35,035 | INFO     | errors: (none)
[2026-01-09 20:16:37] 2026-01-10 01:15:35,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:16:37] 2026-01-10 01:15:35,035 | INFO     | pilot state: finished 
[2026-01-09 20:16:37] 2026-01-10 01:15:35,035 | INFO     | transexitcode: 0
[2026-01-09 20:16:37] 2026-01-10 01:15:35,035 | INFO     | exeerrorcode: 0
[2026-01-09 20:16:37] 2026-01-10 01:15:35,035 | INFO     | exeerrordiag: 
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | exitcode: 0
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | exitmsg: OK
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | cpuconsumptiontime: 65843 s
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | nevents: 400
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | neventsw: 0
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | pid: 9745
[2026-01-09 20:16:37] 2026-01-10 01:15:35,036 | INFO     | pgrp: 9745
[2026-01-09 20:16:37] 2026-01-10 01:15:35,037 | INFO     | corecount: 12
[2026-01-09 20:16:37] 2026-01-10 01:15:35,037 | INFO     | event service: False
[2026-01-09 20:16:37] 2026-01-10 01:15:35,037 | INFO     | sizes: {0: 2283918, 5: 2284180, 11: 2284236, 5986: 2310958, 5987: 2319956, 5989: 2320012, 5997: 2320334}
[2026-01-09 20:16:37] 2026-01-10 01:15:35,037 | INFO     | --------------------------------------------------
[2026-01-09 20:16:37] 2026-01-10 01:15:35,037 | INFO     | 
[2026-01-09 20:16:37] 2026-01-10 01:15:35,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:16:37] 2026-01-10 01:15:35,060 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,061 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,061 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,061 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:16:37] 2026-01-10 01:15:35,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:16:37] 2026-01-10 01:15:35,064 | INFO     | job 6964539063 has completed (purged errors)
[2026-01-09 20:16:37] 2026-01-10 01:15:35,064 | INFO     | overall cleanup function is called
[2026-01-09 20:16:37] 2026-01-10 01:15:36,072 | INFO     | --- collectZombieJob: --- 10, [9745]
[2026-01-09 20:16:37] 2026-01-10 01:15:36,072 | INFO     | zombie collector waiting for pid 9745
[2026-01-09 20:16:37] 2026-01-10 01:15:36,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:16:37] 2026-01-10 01:15:36,073 | INFO     | collected zombie processes
[2026-01-09 20:16:37] 2026-01-10 01:15:36,073 | INFO     | will attempt to kill all subprocesses of pid=9745
[2026-01-09 20:16:37] 2026-01-10 01:15:36,161 | INFO     | process IDs to be killed: [9745] (in reverse order)
[2026-01-09 20:16:37] 2026-01-10 01:15:36,209 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:16:37] 2026-01-10 01:15:36,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:16:37] 2026-01-10 01:15:36,213 | INFO     | did not find any defunct processes belonging to 9745
[2026-01-09 20:16:37] 2026-01-10 01:15:36,216 | INFO     | did not find any defunct processes belonging to 9745
[2026-01-09 20:16:37] 2026-01-10 01:15:36,217 | INFO     | ready for new job
[2026-01-09 20:16:37] 2026-01-10 01:15:36,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:16:37] 2026-01-10 01:15:36,219 | INFO     | ***************************************
[2026-01-09 20:16:37] 2026-01-10 01:15:36,219 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:16:37] 2026-01-10 01:15:36,219 | INFO     | ***************************************
[2026-01-09 20:16:37] 2026-01-10 01:15:36,219 | INFO     | 
[2026-01-09 20:16:37] 2026-01-10 01:15:36,219 | INFO     | architecture information:
[2026-01-09 20:16:37] 2026-01-10 01:15:36,220 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:16:37] 2026-01-10 01:15:36,233 | INFO     | cat /etc/os-release:
[2026-01-09 20:16:37] NAME="CentOS Linux"
[2026-01-09 20:16:37] VERSION="7 (Core)"
[2026-01-09 20:16:37] ID="centos"
[2026-01-09 20:16:37] ID_LIKE="rhel fedora"
[2026-01-09 20:16:37] VERSION_ID="7"
[2026-01-09 20:16:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:16:37] ANSI_COLOR="0;31"
[2026-01-09 20:16:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:16:37] HOME_URL="https://www.centos.org/"
[2026-01-09 20:16:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:16:37] 
[2026-01-09 20:16:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:16:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:16:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:16:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:16:37] 
[2026-01-09 20:16:37] 2026-01-10 01:15:36,234 | INFO     | ***************************************
[2026-01-09 20:16:37] 2026-01-10 01:15:36,737 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:16:37] 2026-01-10 01:15:36,753 | INFO     | sufficient remaining disk space (29312942080 B)
[2026-01-09 20:16:37] 2026-01-10 01:15:36,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:16:37] 2026-01-10 01:15:36,753 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:16:37] 2026-01-10 01:15:36,753 | INFO     | update_server=False
[2026-01-09 20:16:37] 2026-01-10 01:15:36,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:16:37] 2026-01-10 01:15:37,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:16:37] 2026-01-10 01:15:37,020 | INFO     | aborting loop
[2026-01-09 20:16:37] 2026-01-10 01:15:37,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:16:37] 2026-01-10 01:15:37,506 | INFO     | all data control threads have been joined
[2026-01-09 20:16:37] 2026-01-10 01:15:37,736 | INFO     | all job control threads have been joined
[2026-01-09 20:16:37] 2026-01-10 01:15:37,759 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:37,885 | INFO     | all payload control threads have been joined
[2026-01-09 20:16:37] 2026-01-10 01:15:37,969 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:37,974 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:37,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:16:37] 2026-01-10 01:15:38,025 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,119 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,282 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,437 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,512 | INFO     | [data] control thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,741 | INFO     | [job] control thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,890 | INFO     | [payload] control thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:38,957 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:39,107 | INFO     | [job] validate thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:39,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:16:37] 2026-01-10 01:15:39,998 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:40,610 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:15:41,364 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:16:37] 2026-01-10 01:16:07,377 | INFO     | PID=3349 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 20:16:37] 2026-01-10 01:16:07,379 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:16:37] 2026-01-10 01:16:07,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:16:37] 2026-01-10 01:16:07,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:16:37] 2026-01-10 01:16:30,640 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:16:37] 2026-01-10 01:16:32,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577012021056)>', '<ExcThread(monitor, started 140576351577856)>']
[2026-01-09 20:16:37] 2026-01-10 01:16:32,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:16:37] 2026-01-10 01:16:32,507 | INFO     | [monitor] control thread has ended
[2026-01-09 20:16:37] 2026-01-10 01:16:37,179 | INFO     | all workflow threads have been joined
[2026-01-09 20:16:37] 2026-01-10 01:16:37,179 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:16:37] 2026-01-10 01:16:37,180 | INFO     | traces error code: 0
[2026-01-09 20:16:37] 2026-01-10 01:16:37,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:16:37] 2026-01-10 01:16:37,288 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:16:37] 2026-01-10 01:16:37,293 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:16:37] 2026-01-10 01:16:37,297 [wrapper] pilotpid: 3349
[2026-01-09 20:16:37] 2026-01-10 01:16:37,301 [wrapper] Pilot exit status: 0
[2026-01-09 20:16:37] 2026-01-10 01:16:37,317 [wrapper] pandaids: 6964539063
[2026-01-09 20:16:37] 2026-01-10 01:16:37,363 [wrapper] cleanup supervisor_pilot  9253 3350
[2026-01-09 20:16:37] 2026-01-10 01:16:37,368 [wrapper] Test setup, not cleaning
[2026-01-09 20:16:37] 2026-01-10 01:16:37,372 [wrapper] apfmon messages muted
[2026-01-09 20:16:37] 2026-01-10 01:16:37,375 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:16:37] 2026-01-10 01:16:37,379 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:16:37]  *** Error codes and diagnostics ***
[2026-01-09 20:16:37]     "exeErrorCode": 0,
[2026-01-09 20:16:37]     "exeErrorDiag": "",
[2026-01-09 20:16:37]     "pilotErrorCode": 0,
[2026-01-09 20:16:37]     "pilotErrorDiag": "",
[2026-01-09 20:16:37]  *** Listing of results directory ***
[2026-01-09 20:16:37] total 437004
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas      5112 Jan  9 10:55 queuedata.json
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas    579449 Jan  9 10:55 pilot3.tar.gz
[2026-01-09 20:16:37] -rwx------ 1 boincer umatlas     36322 Jan  9 10:56 runpilot2-wrapper.sh
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:16:37] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:35 run_atlas
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:35 job.xml
[2026-01-09 20:16:37] -rw-r--r-- 2 boincer umatlas 221740652 Jan  9 18:35 EVNT.47898824._000722.pool.root.1
[2026-01-09 20:16:37] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:35 start_atlas.sh
[2026-01-09 20:16:37] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:35 shared
[2026-01-09 20:16:37] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 18:35 input.tar.gz
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:35 boinc_lockfile
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas      2518 Jan  9 18:35 pandaJob.out
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas        57 Jan  9 18:35 setup.sh.local
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas    989374 Jan  9 18:35 agis_schedconf.cvmfs.json
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas   1516240 Jan  9 18:35 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:16:37] drwx------ 5 boincer umatlas      4096 Jan  9 18:35 pilot3
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 20:12 init_data.xml
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas 219301008 Jan  9 20:14 HITS.47898826._039947.pool.root.1
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas       530 Jan  9 20:15 boinc_task_state.xml
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas      1047 Jan  9 20:15 memory_monitor_summary.json
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas    414683 Jan  9 20:15 log.47898826._039947.job.log.tgz.1
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas      7856 Jan  9 20:15 heartbeat.json
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas        95 Jan  9 20:16 pilot_heartbeat.json
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 20:16 boinc_mmap_file
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas        27 Jan  9 20:16 wrapper_checkpoint.txt
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas      4745 Jan  9 20:16 pilotlog.txt
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas    852881 Jan  9 20:16 log.47898826._039947.job.log.1
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas       357 Jan  9 20:16 output.list
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas       620 Jan  9 20:16 runtime_log
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas   1290240 Jan  9 20:16 result.tar.gz
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 20:16 runtime_log.err
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas       659 Jan  9 20:16 eNhNDmO1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOShKDmklBlNo.diag
[2026-01-09 20:16:37] -rw-r--r-- 1 boincer umatlas     21909 Jan  9 20:16 stderr.txt
[2026-01-09 20:16:37] HITS file was successfully produced:
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas 219301008 Jan  9 20:14 shared/HITS.pool.root.1
[2026-01-09 20:16:37]  *** Contents of shared directory: ***
[2026-01-09 20:16:37] total 432564
[2026-01-09 20:16:37] -rw-r--r-- 2 boincer umatlas 221740652 Jan  9 18:35 ATLAS.root_0
[2026-01-09 20:16:37] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:35 start_atlas.sh
[2026-01-09 20:16:37] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 18:35 input.tar.gz
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas 219301008 Jan  9 20:14 HITS.pool.root.1
[2026-01-09 20:16:37] -rw------- 1 boincer umatlas   1290240 Jan  9 20:16 result.tar.gz
20:16:38 (31159): run_atlas exited; CPU time 65828.378154
20:16:38 (31159): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN