Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:42:21 (12384): wrapper (7.7.26015): starting
09:42:21 (12384): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:42:21] Arguments: --nthreads 8
[2026-01-10 09:42:21] Threads: 8
[2026-01-10 09:42:21] Checking for CVMFS
[2026-01-10 09:42:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:42:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:42:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:42:25] 2.11.2.0 3545 36627 122820 154973 2 61 24232811 25165825 899 130560 0 18279617 99.828 10328314 3014 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 09:42:25] CVMFS is ok
[2026-01-10 09:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:42:25] Checking for apptainer binary...
[2026-01-10 09:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:42:25] Running /usr/bin/apptainer --version
[2026-01-10 09:42:25] apptainer version 1.3.2-1.el7
[2026-01-10 09:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:42:50] cg-vwn466.simple-grid.lan
[2026-01-10 09:42:50] apptainer works
[2026-01-10 09:42:50] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:42:50] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:42:50] Starting ATLAS job with PandaID=6964539043
[2026-01-10 09:42:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:33:39]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:33:39] 2026-01-10 14:32:36,108 | INFO     | time since job start (20742s) is within the limit (349056.0s)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,263 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:33:39] 2026-01-10 14:32:36,264 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,265 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6964539043/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,266 | INFO     | extracted standard info from prmon json
[2026-01-10 15:33:39] 2026-01-10 14:32:36,266 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:33:39] 2026-01-10 14:32:36,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:33:39] 2026-01-10 14:32:36,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 15:33:39] 2026-01-10 14:32:36,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 15:33:39] 2026-01-10 14:32:36,273 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:33:39] 2026-01-10 14:32:36,274 | INFO     | sum of square deviations: 11143362422.5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,277 | INFO     | sum of deviations: 188349822945.49994
[2026-01-10 15:33:39] 2026-01-10 14:32:36,277 | INFO     | mean x: 1768045380.5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,278 | INFO     | mean y: 2427833.7848484847
[2026-01-10 15:33:39] 2026-01-10 14:32:36,278 | INFO     | intersect: -29881822695.874718
[2026-01-10 15:33:39] 2026-01-10 14:32:36,278 | INFO     | chi2: 9.194986954370188
[2026-01-10 15:33:39] 2026-01-10 14:32:36,279 | INFO     | sum of square deviations: 10644478650.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,282 | INFO     | sum of deviations: 230204644735.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,282 | INFO     | mean x: 1768045228.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,282 | INFO     | mean y: 2440502.0123076923
[2026-01-10 15:33:39] 2026-01-10 14:32:36,283 | INFO     | intersect: -38234493120.5801
[2026-01-10 15:33:39] 2026-01-10 14:32:36,283 | INFO     | chi2: 7.634914980868485
[2026-01-10 15:33:39] 2026-01-10 14:32:36,283 | INFO     | current chi2=7.634914980868485 (change=16.96654906900366 %)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,283 | INFO     | right removable region: 324
[2026-01-10 15:33:39] 2026-01-10 14:32:36,284 | INFO     | sum of square deviations: 10644478650.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,287 | INFO     | sum of deviations: 73128091736.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,287 | INFO     | mean x: 1768045533.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,287 | INFO     | mean y: 2463038.9415384615
[2026-01-10 15:33:39] 2026-01-10 14:32:36,287 | INFO     | intersect: -12144096711.135937
[2026-01-10 15:33:39] 2026-01-10 14:32:36,288 | INFO     | chi2: 4.332219681808608
[2026-01-10 15:33:39] 2026-01-10 14:32:36,288 | INFO     | current chi2=4.332219681808608 (change=52.88498283567882 %)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,289 | INFO     | sum of square deviations: 10160711440.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,292 | INFO     | sum of deviations: -13067920779.5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,292 | INFO     | mean x: 1768045685.5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,292 | INFO     | mean y: 2490182.803125
[2026-01-10 15:33:39] 2026-01-10 14:32:36,292 | INFO     | intersect: 2276413725.3706098
[2026-01-10 15:33:39] 2026-01-10 14:32:36,293 | INFO     | chi2: 1.7714442816991678
[2026-01-10 15:33:39] 2026-01-10 14:32:36,293 | INFO     | current chi2=1.7714442816991678 (change=59.110007991108425 %)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,293 | INFO     | sum of square deviations: 9691828230.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,296 | INFO     | sum of deviations: -23897172608.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,296 | INFO     | mean x: 1768045838.0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,297 | INFO     | mean y: 2493682.3936507935
[2026-01-10 15:33:39] 2026-01-10 14:32:36,297 | INFO     | intersect: 4361970095.600987
[2026-01-10 15:33:39] 2026-01-10 14:32:36,297 | INFO     | chi2: 1.7102241495769275
[2026-01-10 15:33:39] 2026-01-10 14:32:36,297 | INFO     | current chi2=1.7102241495769275 (change=3.4559445507096624 %)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,297 | INFO     | left removable region: 30
[2026-01-10 15:33:39] 2026-01-10 14:32:36,298 | INFO     | sum of square deviations: 7879803557.5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,301 | INFO     | sum of deviations: 14102174376.499998
[2026-01-10 15:33:39] 2026-01-10 14:32:36,301 | INFO     | mean x: 1768046112.5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,301 | INFO     | mean y: 2509839.4795918367
[2026-01-10 15:33:39] 2026-01-10 14:32:36,301 | INFO     | intersect: -3161692719.9149776
[2026-01-10 15:33:39] 2026-01-10 14:32:36,301 | INFO     | chi2: 0.0021623281652140653
[2026-01-10 15:33:39] 2026-01-10 14:32:36,302 | INFO     | current memory leak: 1.79 B/s (using 294 data points, chi2=0.00)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,302 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | ..............................
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . Timing measurements:
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . get job = 0 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . initial setup = 10 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . payload setup = 150 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . stage-in = 0 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . payload execution = 20254 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . stage-out = 6 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,303 | INFO     | . log creation = 1 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,304 | INFO     | ..............................
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | 
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | job summary report
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | --------------------------------------------------
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | PanDA job id: 6964539043
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | task id: 47898826
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | errors: (none)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:33:39] 2026-01-10 14:32:36,419 | INFO     | pilot state: finished 
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | transexitcode: 0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | exeerrorcode: 0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | exeerrordiag: 
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | exitcode: 0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | exitmsg: OK
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | cpuconsumptiontime: 75736 s
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | nevents: 400
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | neventsw: 0
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | pid: 22584
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | pgrp: 22584
[2026-01-10 15:33:39] 2026-01-10 14:32:36,420 | INFO     | corecount: 8
[2026-01-10 15:33:39] 2026-01-10 14:32:36,421 | INFO     | event service: False
[2026-01-10 15:33:39] 2026-01-10 14:32:36,421 | INFO     | sizes: {0: 2283086, 1: 2283771, 2: 2283970, 13: 2283970, 23: 2284026, 34: 2284054, 45: 2284210, 56: 2284238, 66: 2284266, 77: 2284294, 88: 2284350, 98: 2284658, 10
[2026-01-10 15:33:39] 2026-01-10 14:32:36,421 | INFO     | --------------------------------------------------
[2026-01-10 15:33:39] 2026-01-10 14:32:36,421 | INFO     | 
[2026-01-10 15:33:39] 2026-01-10 14:32:36,421 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-10 15:33:39] 2026-01-10 14:32:36,948 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,948 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | job 6964539043 has completed (purged errors)
[2026-01-10 15:33:39] 2026-01-10 14:32:36,950 | INFO     | overall cleanup function is called
[2026-01-10 15:33:39] 2026-01-10 14:32:37,959 | INFO     | --- collectZombieJob: --- 10, [22584]
[2026-01-10 15:33:39] 2026-01-10 14:32:37,960 | INFO     | zombie collector waiting for pid 22584
[2026-01-10 15:33:39] 2026-01-10 14:32:37,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:33:39] 2026-01-10 14:32:37,960 | INFO     | collected zombie processes
[2026-01-10 15:33:39] 2026-01-10 14:32:37,960 | INFO     | will attempt to kill all subprocesses of pid=22584
[2026-01-10 15:33:39] 2026-01-10 14:32:38,047 | INFO     | process IDs to be killed: [22584] (in reverse order)
[2026-01-10 15:33:39] 2026-01-10 14:32:38,966 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:33:39] 2026-01-10 14:32:38,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:33:39] 2026-01-10 14:32:38,968 | INFO     | did not find any defunct processes belonging to 22584
[2026-01-10 15:33:39] 2026-01-10 14:32:38,970 | INFO     | did not find any defunct processes belonging to 22584
[2026-01-10 15:33:39] 2026-01-10 14:32:38,970 | INFO     | ready for new job
[2026-01-10 15:33:39] 2026-01-10 14:32:38,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:33:39] 2026-01-10 14:32:38,972 | INFO     | ***************************************
[2026-01-10 15:33:39] 2026-01-10 14:32:38,972 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:33:39] 2026-01-10 14:32:38,973 | INFO     | ***************************************
[2026-01-10 15:33:39] 2026-01-10 14:32:38,973 | INFO     | 
[2026-01-10 15:33:39] 2026-01-10 14:32:38,973 | INFO     | pilot is running in a VM
[2026-01-10 15:33:39] 2026-01-10 14:32:38,973 | INFO     | architecture information:
[2026-01-10 15:33:39] 2026-01-10 14:32:38,980 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:33:39] 2026-01-10 14:32:39,288 | INFO     | cat /etc/os-release:
[2026-01-10 15:33:39] NAME="CentOS Linux"
[2026-01-10 15:33:39] VERSION="7 (Core)"
[2026-01-10 15:33:39] ID="centos"
[2026-01-10 15:33:39] ID_LIKE="rhel fedora"
[2026-01-10 15:33:39] VERSION_ID="7"
[2026-01-10 15:33:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:33:39] ANSI_COLOR="0;31"
[2026-01-10 15:33:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:33:39] HOME_URL="https://www.centos.org/"
[2026-01-10 15:33:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:33:39] 
[2026-01-10 15:33:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:33:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:33:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:33:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:33:39] 
[2026-01-10 15:33:39] 2026-01-10 14:32:39,288 | INFO     | ***************************************
[2026-01-10 15:33:39] 2026-01-10 14:32:39,791 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-10 15:33:39] 2026-01-10 14:32:40,054 | INFO     | sufficient remaining disk space (497494786048 B)
[2026-01-10 15:33:39] 2026-01-10 14:32:40,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:33:39] 2026-01-10 14:32:40,054 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:33:39] 2026-01-10 14:32:40,054 | INFO     | update_server=False
[2026-01-10 15:33:39] 2026-01-10 14:32:40,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:33:39] 2026-01-10 14:32:40,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:33:39] 2026-01-10 14:32:40,056 | INFO     | aborting loop
[2026-01-10 15:33:39] 2026-01-10 14:32:40,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:33:39] 2026-01-10 14:32:40,307 | INFO     | all job control threads have been joined
[2026-01-10 15:33:39] 2026-01-10 14:32:40,495 | INFO     | all data control threads have been joined
[2026-01-10 15:33:39] 2026-01-10 14:32:40,883 | INFO     | all payload control threads have been joined
[2026-01-10 15:33:39] 2026-01-10 14:32:41,060 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:41,061 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:41,119 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:41,313 | INFO     | [job] control thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:41,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:33:39] 2026-01-10 14:32:41,501 | INFO     | [data] control thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:41,577 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:41,889 | INFO     | [payload] control thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,001 | INFO     | [job] validate thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,002 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,006 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,116 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,153 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,256 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,342 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:42,439 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:32:43,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:33:39] 2026-01-10 14:32:47,223 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:33:39] 2026-01-10 14:33:09,232 | INFO     | PID=16110 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 15:33:39] 2026-01-10 14:33:09,232 | INFO     | .. there are 2 such processes running
[2026-01-10 15:33:39] 2026-01-10 14:33:09,233 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:33:39] 2026-01-10 14:33:09,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:33:39] 2026-01-10 14:33:09,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:33:39] 2026-01-10 14:33:29,751 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:33:39] 2026-01-10 14:33:29,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989149726528)>', '<ExcThread(monitor, started 139988419213056)>']
[2026-01-10 15:33:39] 2026-01-10 14:33:30,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:33:39] 2026-01-10 14:33:30,360 | INFO     | [monitor] control thread has ended
[2026-01-10 15:33:39] 2026-01-10 14:33:34,916 | INFO     | all workflow threads have been joined
[2026-01-10 15:33:39] 2026-01-10 14:33:34,917 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:33:39] 2026-01-10 14:33:34,917 | INFO     | traces error code: 0
[2026-01-10 15:33:39] 2026-01-10 14:33:34,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:33:39] 2026-01-10 14:33:35,336 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:33:39] 2026-01-10 14:33:35,442 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:33:39] 2026-01-10 14:33:35,518 [wrapper] pilotpid: 16110
[2026-01-10 15:33:39] 2026-01-10 14:33:35,593 [wrapper] Pilot exit status: 0
[2026-01-10 15:33:39] 2026-01-10 14:33:36,045 [wrapper] pandaids: 6964539043
[2026-01-10 15:33:39] 2026-01-10 14:33:36,977 [wrapper] cleanup supervisor_pilot 23114 16111
[2026-01-10 15:33:39] 2026-01-10 14:33:37,072 [wrapper] Test setup, not cleaning
[2026-01-10 15:33:39] 2026-01-10 14:33:37,171 [wrapper] apfmon messages muted
[2026-01-10 15:33:39] 2026-01-10 14:33:37,253 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:33:39] 2026-01-10 14:33:37,342 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:33:39]  *** Error codes and diagnostics ***
[2026-01-10 15:33:39]     "exeErrorCode": 0,
[2026-01-10 15:33:39]     "exeErrorDiag": "",
[2026-01-10 15:33:39]     "pilotErrorCode": 0,
[2026-01-10 15:33:39]     "pilotErrorDiag": "",
[2026-01-10 15:33:39]  *** Listing of results directory ***
[2026-01-10 15:33:39] total 452228
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc      5112 Jan  9 16:55 queuedata.json
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc    579449 Jan  9 16:55 pilot3.tar.gz
[2026-01-10 15:33:39] -rwx------. 1 boinc boinc     36322 Jan  9 16:56 runpilot2-wrapper.sh
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc       100 Jan 10 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:33:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 09:42 run_atlas
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc       105 Jan 10 09:42 job.xml
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc      6392 Jan 10 09:42 init_data.xml
[2026-01-10 15:33:39] -rw-r--r--. 2 boinc boinc 225577558 Jan 10 09:42 EVNT.47898824._000694.pool.root.1
[2026-01-10 15:33:39] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:42 start_atlas.sh
[2026-01-10 15:33:39] drwxrwx--x. 2 boinc boinc        68 Jan 10 09:42 shared
[2026-01-10 15:33:39] -rw-r--r--. 2 boinc boinc    592405 Jan 10 09:42 input.tar.gz
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc         0 Jan 10 09:42 boinc_lockfile
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc      2516 Jan 10 09:42 pandaJob.out
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc    989548 Jan 10 09:46 agis_schedconf.cvmfs.json
[2026-01-10 15:33:39] drwx------. 5 boinc boinc      4096 Jan 10 09:46 pilot3
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc 226986844 Jan 10 15:28 HITS.47898826._039927.pool.root.1
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc       530 Jan 10 15:29 boinc_task_state.xml
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc      1011 Jan 10 15:30 memory_monitor_summary.json
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc   1516240 Jan 10 15:30 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc    531490 Jan 10 15:30 log.47898826._039927.job.log.tgz.1
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc      7775 Jan 10 15:32 heartbeat.json
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc        95 Jan 10 15:33 pilot_heartbeat.json
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc      8192 Jan 10 15:33 boinc_mmap_file
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc        28 Jan 10 15:33 wrapper_checkpoint.txt
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc      4884 Jan 10 15:33 pilotlog.txt
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc   2777604 Jan 10 15:33 log.47898826._039927.job.log.1
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc       357 Jan 10 15:33 output.list
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc       620 Jan 10 15:33 runtime_log
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc   3328000 Jan 10 15:33 result.tar.gz
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc       657 Jan 10 15:33 TPiMDmO1Ty8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9RhKDmXEVkLo.diag
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc      8817 Jan 10 15:33 runtime_log.err
[2026-01-10 15:33:39] -rw-r--r--. 1 boinc boinc     20769 Jan 10 15:33 stderr.txt
[2026-01-10 15:33:39] HITS file was successfully produced:
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc 226986844 Jan 10 15:28 shared/HITS.pool.root.1
[2026-01-10 15:33:39]  *** Contents of shared directory: ***
[2026-01-10 15:33:39] total 445808
[2026-01-10 15:33:39] -rw-r--r--. 2 boinc boinc 225577558 Jan 10 09:42 ATLAS.root_0
[2026-01-10 15:33:39] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:42 start_atlas.sh
[2026-01-10 15:33:39] -rw-r--r--. 2 boinc boinc    592405 Jan 10 09:42 input.tar.gz
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc 226986844 Jan 10 15:28 HITS.pool.root.1
[2026-01-10 15:33:39] -rw-------. 1 boinc boinc   3328000 Jan 10 15:33 result.tar.gz
15:33:41 (12384): run_atlas exited; CPU time 75931.095134
15:33:41 (12384): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN