Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:30:19 (1977014): wrapper (7.7.26015): starting
18:30:19 (1977014): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:30:19] Arguments: --nthreads 8
[2026-01-09 18:30:19] Threads: 8
[2026-01-09 18:30:19] Checking for CVMFS
[2026-01-09 18:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:30:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:30:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:30:21] 2.13.3.0 12357 94025 172280 154961 3 477 21261959 32503809 37640 16776704 0 1288774792 99.589 1355748695 48150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:30:21] CVMFS is ok
[2026-01-09 18:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:30:21] Further information can be found at the LHC@home message board.
[2026-01-09 18:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:30:21] Checking for apptainer binary...
[2026-01-09 18:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:30:21] Running /usr/bin/apptainer --version
[2026-01-09 18:30:21] apptainer version 1.4.5-2.el9
[2026-01-09 18:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:30:22] c8-7-2.aglt2.org
[2026-01-09 18:30:22] apptainer works
[2026-01-09 18:30:22] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:30:22] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:30:22] Starting ATLAS job with PandaID=6963378824
[2026-01-09 18:30:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 00:07:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 00:07:06] 2026-01-10 05:06:17,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,457 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 00:07:06] 2026-01-10 05:06:17,462 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3791.2097578125
[2026-01-10 00:07:06] 2026-01-10 05:06:17,474 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963378824/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,474 | INFO     | extracted standard info from prmon json
[2026-01-10 00:07:06] 2026-01-10 05:06:17,474 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 00:07:06] 2026-01-10 05:06:17,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 00:07:06] 2026-01-10 05:06:17,478 | INFO     | fitting pss+swap vs Time
[2026-01-10 00:07:06] 2026-01-10 05:06:17,478 | INFO     | sum of square deviations: 10841142439.400656
[2026-01-10 00:07:06] 2026-01-10 05:06:17,480 | INFO     | sum of deviations: 309657796024.9297
[2026-01-10 00:07:06] 2026-01-10 05:06:17,480 | INFO     | mean x: 1768011566.9571865
[2026-01-10 00:07:06] 2026-01-10 05:06:17,480 | INFO     | mean y: 2839088.9235474006
[2026-01-10 00:07:06] 2026-01-10 05:06:17,480 | INFO     | intersect: -50497241343.633865
[2026-01-10 00:07:06] 2026-01-10 05:06:17,480 | INFO     | chi2: 8.456368327612005
[2026-01-10 00:07:06] 2026-01-10 05:06:17,480 | INFO     | sum of square deviations: 10351451972.24842
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | sum of deviations: 370664508557.16754
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | mean x: 1768011414.4720497
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | mean y: 2857999.0186335403
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | intersect: -63306046280.85119
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | chi2: 7.150986843233532
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | current chi2=7.150986843233532 (change=15.436667772808555 %)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,482 | INFO     | right removable region: 321
[2026-01-10 00:07:06] 2026-01-10 05:06:17,483 | INFO     | sum of square deviations: 10351261042.24842
[2026-01-10 00:07:06] 2026-01-10 05:06:17,484 | INFO     | sum of deviations: 176130669262.56546
[2026-01-10 00:07:06] 2026-01-10 05:06:17,484 | INFO     | mean x: 1768011719.4720497
[2026-01-10 00:07:06] 2026-01-10 05:06:17,484 | INFO     | mean y: 2880644.6739130435
[2026-01-10 00:07:06] 2026-01-10 05:06:17,484 | INFO     | intersect: -30080515585.379147
[2026-01-10 00:07:06] 2026-01-10 05:06:17,485 | INFO     | chi2: 3.6683295833858067
[2026-01-10 00:07:06] 2026-01-10 05:06:17,485 | INFO     | current chi2=3.6683295833858067 (change=56.620508458603204 %)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,485 | INFO     | sum of square deviations: 9876356669.949478
[2026-01-10 00:07:06] 2026-01-10 05:06:17,486 | INFO     | sum of deviations: 88342871368.54248
[2026-01-10 00:07:06] 2026-01-10 05:06:17,487 | INFO     | mean x: 1768011871.9873817
[2026-01-10 00:07:06] 2026-01-10 05:06:17,487 | INFO     | mean y: 2908750.135646688
[2026-01-10 00:07:06] 2026-01-10 05:06:17,487 | INFO     | intersect: -15811753539.276815
[2026-01-10 00:07:06] 2026-01-10 05:06:17,487 | INFO     | chi2: 1.4662436931483371
[2026-01-10 00:07:06] 2026-01-10 05:06:17,487 | INFO     | current chi2=1.4662436931483371 (change=60.02966309818273 %)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,487 | INFO     | sum of square deviations: 9416215976.0
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | sum of deviations: 72616143827.50005
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | mean x: 1768012024.5
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | mean y: 2913950.0673076925
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | intersect: -13631672999.411295
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | chi2: 1.4302354176583605
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | current chi2=1.4302354176583605 (change=2.455817928373095 %)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | left removable region: 30
[2026-01-10 00:07:06] 2026-01-10 05:06:17,489 | INFO     | sum of square deviations: 7639535077.484593
[2026-01-10 00:07:06] 2026-01-10 05:06:17,490 | INFO     | sum of deviations: 118918400582.85571
[2026-01-10 00:07:06] 2026-01-10 05:06:17,490 | INFO     | mean x: 1768012299.072165
[2026-01-10 00:07:06] 2026-01-10 05:06:17,490 | INFO     | mean y: 2939866.673539519
[2026-01-10 00:07:06] 2026-01-10 05:06:17,490 | INFO     | intersect: -27518263018.58194
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | chi2: 0.03168064093371556
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | current memory leak: 15.57 B/s (using 291 data points, chi2=0.03)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | could have reported an average CPU frequency of 3796 MHz (15 samples)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | ..............................
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . Timing measurements:
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . get job = 0 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . initial setup = 4 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . payload setup = 54 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . stage-in = 0 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . payload execution = 19961 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . stage-out = 2 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | . log creation = 0 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,491 | INFO     | ..............................
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | 
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | job summary report
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | --------------------------------------------------
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | PanDA job id: 6963378824
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | task id: 47962010
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | errors: (none)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 00:07:06] 2026-01-10 05:06:17,541 | INFO     | pilot state: finished 
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | transexitcode: 0
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | exeerrorcode: 0
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | exeerrordiag: 
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | exitcode: 0
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | exitmsg: OK
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | cpuconsumptiontime: 138652 s
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | nevents: 900
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | neventsw: 0
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | pid: 1995408
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | pgrp: 1995408
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | corecount: 8
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | event service: False
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | sizes: {0: 2284622, 1: 2284622, 11: 2284650, 22: 2284678, 29: 2284968, 33: 2284996, 20020: 2319548, 20023: 2328542, 20025: 2328598, 20030: 2328844}
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | --------------------------------------------------
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | 
[2026-01-10 00:07:06] 2026-01-10 05:06:17,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | job 6963378824 has completed (purged errors)
[2026-01-10 00:07:06] 2026-01-10 05:06:17,563 | INFO     | overall cleanup function is called
[2026-01-10 00:07:06] 2026-01-10 05:06:18,576 | INFO     | --- collectZombieJob: --- 10, [1995408]
[2026-01-10 00:07:06] 2026-01-10 05:06:18,576 | INFO     | zombie collector waiting for pid 1995408
[2026-01-10 00:07:06] 2026-01-10 05:06:18,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 00:07:06] 2026-01-10 05:06:18,576 | INFO     | collected zombie processes
[2026-01-10 00:07:06] 2026-01-10 05:06:18,576 | INFO     | will attempt to kill all subprocesses of pid=1995408
[2026-01-10 00:07:06] 2026-01-10 05:06:18,993 | INFO     | process IDs to be killed: [1995408] (in reverse order)
[2026-01-10 00:07:06] 2026-01-10 05:06:19,151 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 00:07:06] 2026-01-10 05:06:19,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 00:07:06] 2026-01-10 05:06:19,181 | INFO     | did not find any defunct processes belonging to 1995408
[2026-01-10 00:07:06] 2026-01-10 05:06:19,206 | INFO     | did not find any defunct processes belonging to 1995408
[2026-01-10 00:07:06] 2026-01-10 05:06:19,206 | INFO     | ready for new job
[2026-01-10 00:07:06] 2026-01-10 05:06:19,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 00:07:06] 2026-01-10 05:06:19,209 | INFO     | ***************************************
[2026-01-10 00:07:06] 2026-01-10 05:06:19,211 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 00:07:06] 2026-01-10 05:06:19,211 | INFO     | ***************************************
[2026-01-10 00:07:06] 2026-01-10 05:06:19,211 | INFO     | 
[2026-01-10 00:07:06] 2026-01-10 05:06:19,216 | INFO     | architecture information:
[2026-01-10 00:07:06] 2026-01-10 05:06:19,217 | INFO     | executing command: cat /etc/os-release
[2026-01-10 00:07:06] 2026-01-10 05:06:19,233 | INFO     | cat /etc/os-release:
[2026-01-10 00:07:06] NAME="CentOS Linux"
[2026-01-10 00:07:06] VERSION="7 (Core)"
[2026-01-10 00:07:06] ID="centos"
[2026-01-10 00:07:06] ID_LIKE="rhel fedora"
[2026-01-10 00:07:06] VERSION_ID="7"
[2026-01-10 00:07:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 00:07:06] ANSI_COLOR="0;31"
[2026-01-10 00:07:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 00:07:06] HOME_URL="https://www.centos.org/"
[2026-01-10 00:07:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 00:07:06] 
[2026-01-10 00:07:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 00:07:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 00:07:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 00:07:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 00:07:06] 
[2026-01-10 00:07:06] 2026-01-10 05:06:19,233 | INFO     | ***************************************
[2026-01-10 00:07:06] 2026-01-10 05:06:19,736 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 00:07:06] 2026-01-10 05:06:19,754 | INFO     | sufficient remaining disk space (95698288640 B)
[2026-01-10 00:07:06] 2026-01-10 05:06:19,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 00:07:06] 2026-01-10 05:06:19,755 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 00:07:06] 2026-01-10 05:06:19,755 | INFO     | update_server=False
[2026-01-10 00:07:06] 2026-01-10 05:06:19,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 00:07:06] 2026-01-10 05:06:19,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 00:07:06] 2026-01-10 05:06:19,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 00:07:06] 2026-01-10 05:06:19,868 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 00:07:06] 2026-01-10 05:06:19,868 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 00:07:06] 2026-01-10 05:06:19,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:07:06] 2026-01-10 05:06:19,868 | INFO     | will abort loop
[2026-01-10 00:07:06] 2026-01-10 05:06:20,415 | INFO     | all data control threads have been joined
[2026-01-10 00:07:06] 2026-01-10 05:06:20,761 | INFO     | [job] retrieve thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:20,812 | INFO     | all job control threads have been joined
[2026-01-10 00:07:06] 2026-01-10 05:06:20,814 | INFO     | all payload control threads have been joined
[2026-01-10 00:07:06] 2026-01-10 05:06:20,869 | INFO     | [job] job monitor thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,246 | INFO     | [payload] failed_post thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,420 | INFO     | [data] control thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,516 | INFO     | [payload] validate_post thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,597 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,764 | INFO     | [data] copytool_out thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,817 | INFO     | [job] control thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,819 | INFO     | [payload] control thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:21,907 | INFO     | [job] validate thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:22,063 | INFO     | [data] copytool_in thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:22,160 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:22,207 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:22,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 00:07:06] 2026-01-10 05:06:23,557 | INFO     | [job] queue monitor thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:23,762 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:30,220 | INFO     | job.realtimelogging is not enabled
[2026-01-10 00:07:06] 2026-01-10 05:06:31,226 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 00:07:06] 2026-01-10 05:06:50,768 | INFO     | PID=1984009 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 00:07:06] 2026-01-10 05:06:50,769 | INFO     | .. there are 25 such processes running
[2026-01-10 00:07:06] 2026-01-10 05:06:50,769 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 00:07:06] 2026-01-10 05:06:50,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 00:07:06] 2026-01-10 05:06:50,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 00:07:06] 2026-01-10 05:07:00,293 | INFO     | [monitor] cgroup control has ended
[2026-01-10 00:07:06] 2026-01-10 05:07:00,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383248316224)>', '<ExcThread(monitor, started 140382608287488)>']
[2026-01-10 00:07:06] 2026-01-10 05:07:01,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 00:07:06] 2026-01-10 05:07:01,828 | INFO     | [monitor] control thread has ended
[2026-01-10 00:07:06] 2026-01-10 05:07:06,012 | INFO     | all workflow threads have been joined
[2026-01-10 00:07:06] 2026-01-10 05:07:06,013 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 00:07:06] 2026-01-10 05:07:06,013 | INFO     | traces error code: 0
[2026-01-10 00:07:06] 2026-01-10 05:07:06,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 00:07:06] 2026-01-10 05:07:06,099 [wrapper] ==== pilot stdout END ====
[2026-01-10 00:07:06] 2026-01-10 05:07:06,103 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 00:07:06] 2026-01-10 05:07:06,106 [wrapper] pilotpid: 1984009
[2026-01-10 00:07:06] 2026-01-10 05:07:06,108 [wrapper] Pilot exit status: 0
[2026-01-10 00:07:06] 2026-01-10 05:07:06,125 [wrapper] pandaids: 6963378824
[2026-01-10 00:07:06] 2026-01-10 05:07:06,240 [wrapper] cleanup supervisor_pilot 4064469 1984010
[2026-01-10 00:07:06] 2026-01-10 05:07:06,243 [wrapper] Test setup, not cleaning
[2026-01-10 00:07:06] 2026-01-10 05:07:06,245 [wrapper] apfmon messages muted
[2026-01-10 00:07:06] 2026-01-10 05:07:06,248 [wrapper] ==== wrapper stdout END ====
[2026-01-10 00:07:06] 2026-01-10 05:07:06,250 [wrapper] ==== wrapper stderr END ====
[2026-01-10 00:07:06]  *** Error codes and diagnostics ***
[2026-01-10 00:07:06]     "exeErrorCode": 0,
[2026-01-10 00:07:06]     "exeErrorDiag": "",
[2026-01-10 00:07:06]     "pilotErrorCode": 0,
[2026-01-10 00:07:06]     "pilotErrorDiag": "",
[2026-01-10 00:07:06]  *** Listing of results directory ***
[2026-01-10 00:07:06] total 1154944
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas    579449 Jan  9 02:13 pilot3.tar.gz
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas      5112 Jan  9 02:13 queuedata.json
[2026-01-10 00:07:06] -rwx------. 1 boincer umatlas     36322 Jan  9 02:14 runpilot2-wrapper.sh
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 00:07:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:30 run_atlas
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:30 job.xml
[2026-01-10 00:07:06] -rw-r--r--. 2 boincer umatlas 392707608 Jan  9 18:30 EVNT.47962006._000106.pool.root.1
[2026-01-10 00:07:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:30 start_atlas.sh
[2026-01-10 00:07:06] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:30 shared
[2026-01-10 00:07:06] -rw-r--r--. 2 boincer umatlas    592618 Jan  9 18:30 input.tar.gz
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:30 boinc_lockfile
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas      2892 Jan  9 18:30 pandaJob.out
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas        57 Jan  9 18:30 setup.sh.local
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas    989374 Jan  9 18:31 agis_schedconf.cvmfs.json
[2026-01-10 00:07:06] drwx------. 5 boincer umatlas      4096 Jan  9 18:31 pilot3
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas       532 Jan 10 00:00 boinc_task_state.xml
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas      7173 Jan 10 00:04 init_data.xml
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas 777272846 Jan 10 00:05 HITS.47962010._001305.pool.root.1
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas      1056 Jan 10 00:06 memory_monitor_summary.json
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas   1516240 Jan 10 00:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas   1607161 Jan 10 00:06 log.47962010._001305.job.log.tgz.1
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas      8595 Jan 10 00:06 heartbeat.json
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas        95 Jan 10 00:06 pilot_heartbeat.json
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas        29 Jan 10 00:07 wrapper_checkpoint.txt
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 00:07 boinc_mmap_file
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas      5082 Jan 10 00:07 pilotlog.txt
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas   2772344 Jan 10 00:07 log.47962010._001305.job.log.1
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas       353 Jan 10 00:07 output.list
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas       620 Jan 10 00:07 runtime_log
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas   4403200 Jan 10 00:07 result.tar.gz
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas       661 Jan 10 00:07 SdyMDmSsLy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoHhKDmXGHDPm.diag
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas      9333 Jan 10 00:07 runtime_log.err
[2026-01-10 00:07:06] -rw-r--r--. 1 boincer umatlas     21223 Jan 10 00:07 stderr.txt
[2026-01-10 00:07:06] HITS file was successfully produced:
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas 777272846 Jan 10 00:05 shared/HITS.pool.root.1
[2026-01-10 00:07:06]  *** Contents of shared directory: ***
[2026-01-10 00:07:06] total 1147464
[2026-01-10 00:07:06] -rw-r--r--. 2 boincer umatlas 392707608 Jan  9 18:30 ATLAS.root_0
[2026-01-10 00:07:06] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:30 start_atlas.sh
[2026-01-10 00:07:06] -rw-r--r--. 2 boincer umatlas    592618 Jan  9 18:30 input.tar.gz
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas 777272846 Jan 10 00:05 HITS.pool.root.1
[2026-01-10 00:07:06] -rw-------. 1 boincer umatlas   4403200 Jan 10 00:07 result.tar.gz
00:07:08 (1977014): run_atlas exited; CPU time 138840.349897
00:07:08 (1977014): called boinc_finish(0)

</stderr_txt>
]]>

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