Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:16:46 (14389): wrapper (7.7.26015): starting
18:16:46 (14389): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:16:46] Arguments: --nthreads 8
[2026-01-09 18:16:46] Threads: 8
[2026-01-09 18:16:46] Checking for CVMFS
[2026-01-09 18:16:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:16:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:16:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:16:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:16:46] 2.11.2.0 28294 181705 138084 154961 3 49 12547746 18432001 1859 130560 0 120730174 99.979 7050082 31919 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:16:46] CVMFS is ok
[2026-01-09 18:16:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:16:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:16:46] Further information can be found at the LHC@home message board.
[2026-01-09 18:16:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:16:46] Checking for apptainer binary...
[2026-01-09 18:16:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:16:46] Running /usr/bin/apptainer --version
[2026-01-09 18:16:46] apptainer version 1.3.2-1.el7
[2026-01-09 18:16:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:16:47] c-206-25.aglt2.org
[2026-01-09 18:16:47] apptainer works
[2026-01-09 18:16:47] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:16:47] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:16:47] Starting ATLAS job with PandaID=6963188180
[2026-01-09 18:16:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:49:30]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:49:30] 2026-01-10 03:48:46,468 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 22:49:30] 2026-01-10 03:48:47,487 | INFO     | monitor loop #1174: job 0:6963188180 is in state 'finished'
[2026-01-09 22:49:30] 2026-01-10 03:48:47,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:49:30] 2026-01-10 03:48:48,010 | INFO     | time since job start (16310s) is within the limit (349056.0s)
[2026-01-09 22:49:30] 2026-01-10 03:48:49,990 | INFO     | monitor loop #1175: job 0:6963188180 is in state 'finished'
[2026-01-09 22:49:30] 2026-01-10 03:48:49,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,015 | INFO     | time since job start (16312s) is within the limit (349056.0s)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,339 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 22:49:30] 2026-01-10 03:48:50,342 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2100.75
[2026-01-09 22:49:30] 2026-01-10 03:48:50,345 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963188180/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,346 | INFO     | extracted standard info from prmon json
[2026-01-09 22:49:30] 2026-01-10 03:48:50,346 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:49:30] 2026-01-10 03:48:50,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:49:30] 2026-01-10 03:48:50,346 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:49:30] 2026-01-10 03:48:50,346 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:49:30] 2026-01-10 03:48:50,350 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:49:30] 2026-01-10 03:48:50,350 | INFO     | sum of square deviations: 5902093918.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,352 | INFO     | sum of deviations: -32932289661.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,352 | INFO     | mean x: 1768008756.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,352 | INFO     | mean y: 2528284.988764045
[2026-01-09 22:49:30] 2026-01-10 03:48:50,352 | INFO     | intersect: 9867599441.888689
[2026-01-09 22:49:30] 2026-01-10 03:48:50,353 | INFO     | chi2: 1.6914410303740126
[2026-01-09 22:49:30] 2026-01-10 03:48:50,353 | INFO     | sum of square deviations: 5576683165.5
[2026-01-09 22:49:30] 2026-01-10 03:48:50,354 | INFO     | sum of deviations: -32521887364.500004
[2026-01-09 22:49:30] 2026-01-10 03:48:50,355 | INFO     | mean x: 1768008603.5
[2026-01-09 22:49:30] 2026-01-10 03:48:50,355 | INFO     | mean y: 2528477.248091603
[2026-01-09 22:49:30] 2026-01-10 03:48:50,355 | INFO     | intersect: 10313133357.62032
[2026-01-09 22:49:30] 2026-01-10 03:48:50,355 | INFO     | chi2: 1.6888367887478635
[2026-01-09 22:49:30] 2026-01-10 03:48:50,355 | INFO     | current chi2=1.6888367887478635 (change=0.153965853930674 %)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,355 | INFO     | right removable region: 261
[2026-01-09 22:49:30] 2026-01-10 03:48:50,356 | INFO     | sum of square deviations: 5576683165.5
[2026-01-09 22:49:30] 2026-01-10 03:48:50,357 | INFO     | sum of deviations: -72061993668.5
[2026-01-09 22:49:30] 2026-01-10 03:48:50,357 | INFO     | mean x: 1768008908.5
[2026-01-09 22:49:30] 2026-01-10 03:48:50,357 | INFO     | mean y: 2546462.1259541987
[2026-01-09 22:49:30] 2026-01-10 03:48:50,358 | INFO     | intersect: 22848787316.972057
[2026-01-09 22:49:30] 2026-01-10 03:48:50,358 | INFO     | chi2: 0.30106793524809594
[2026-01-09 22:49:30] 2026-01-10 03:48:50,358 | INFO     | current chi2=0.30106793524809594 (change=82.20050655969227 %)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,358 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,360 | INFO     | sum of deviations: -75355018858.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,360 | INFO     | mean x: 1768009061.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,360 | INFO     | mean y: 2548049.0428015566
[2026-01-09 22:49:30] 2026-01-10 03:48:50,360 | INFO     | intersect: 25314489118.61235
[2026-01-09 22:49:30] 2026-01-10 03:48:50,360 | INFO     | chi2: 0.26611103266699043
[2026-01-09 22:49:30] 2026-01-10 03:48:50,361 | INFO     | current chi2=0.26611103266699043 (change=11.610968319259628 %)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,361 | INFO     | left removable region: 20
[2026-01-09 22:49:30] 2026-01-10 03:48:50,361 | INFO     | sum of square deviations: 4340323240.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,362 | INFO     | sum of deviations: -60740795261.99999
[2026-01-09 22:49:30] 2026-01-10 03:48:50,362 | INFO     | mean x: 1768009183.0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,362 | INFO     | mean y: 2541583.5684647304
[2026-01-09 22:49:30] 2026-01-10 03:48:50,363 | INFO     | intersect: 24745003807.63519
[2026-01-09 22:49:30] 2026-01-10 03:48:50,363 | INFO     | chi2: 0.2530587340854521
[2026-01-09 22:49:30] 2026-01-10 03:48:50,363 | INFO     | current memory leak: -13.99 B/s (using 241 data points, chi2=0.25)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,363 | INFO     | could have reported an average CPU frequency of 2538 MHz (12 samples)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,363 | INFO     | ..............................
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . Timing measurements:
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . get job = 0 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . initial setup = 2 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . payload setup = 5 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . stage-in = 0 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . payload execution = 16281 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . stage-out = 2 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | . log creation = 0 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,364 | INFO     | ..............................
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | 
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | job summary report
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | --------------------------------------------------
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | PanDA job id: 6963188180
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | task id: 47898826
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | errors: (none)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:49:30] 2026-01-10 03:48:50,443 | INFO     | pilot state: finished 
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | transexitcode: 0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | exeerrorcode: 0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | exeerrordiag: 
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | exitcode: 0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | exitmsg: OK
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | cpuconsumptiontime: 124340 s
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | nevents: 400
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | neventsw: 0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | pid: 24557
[2026-01-09 22:49:30] 2026-01-10 03:48:50,444 | INFO     | pgrp: 24557
[2026-01-09 22:49:30] 2026-01-10 03:48:50,445 | INFO     | corecount: 8
[2026-01-09 22:49:30] 2026-01-10 03:48:50,445 | INFO     | event service: False
[2026-01-09 22:49:30] 2026-01-10 03:48:50,445 | INFO     | sizes: {0: 2283971, 1: 2283971, 4: 2284261, 11: 2284289, 16289: 2315750, 16292: 2324748, 16293: 2324932, 16297: 2325126}
[2026-01-09 22:49:30] 2026-01-10 03:48:50,445 | INFO     | --------------------------------------------------
[2026-01-09 22:49:30] 2026-01-10 03:48:50,445 | INFO     | 
[2026-01-09 22:49:30] 2026-01-10 03:48:50,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 22:49:30] 2026-01-10 03:48:50,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,463 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,463 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,463 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:49:30] 2026-01-10 03:48:50,466 | INFO     | job 6963188180 has completed (purged errors)
[2026-01-09 22:49:30] 2026-01-10 03:48:50,467 | INFO     | overall cleanup function is called
[2026-01-09 22:49:30] 2026-01-10 03:48:51,474 | INFO     | --- collectZombieJob: --- 10, [24557]
[2026-01-09 22:49:30] 2026-01-10 03:48:51,474 | INFO     | zombie collector waiting for pid 24557
[2026-01-09 22:49:30] 2026-01-10 03:48:51,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:49:30] 2026-01-10 03:48:51,475 | INFO     | collected zombie processes
[2026-01-09 22:49:30] 2026-01-10 03:48:51,475 | INFO     | will attempt to kill all subprocesses of pid=24557
[2026-01-09 22:49:30] 2026-01-10 03:48:51,579 | INFO     | process IDs to be killed: [24557] (in reverse order)
[2026-01-09 22:49:30] 2026-01-10 03:48:51,619 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:49:30] 2026-01-10 03:48:51,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:49:30] 2026-01-10 03:48:51,622 | INFO     | did not find any defunct processes belonging to 24557
[2026-01-09 22:49:30] 2026-01-10 03:48:51,625 | INFO     | did not find any defunct processes belonging to 24557
[2026-01-09 22:49:30] 2026-01-10 03:48:51,626 | INFO     | ready for new job
[2026-01-09 22:49:30] 2026-01-10 03:48:51,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:49:30] 2026-01-10 03:48:51,628 | INFO     | ***************************************
[2026-01-09 22:49:30] 2026-01-10 03:48:51,629 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:49:30] 2026-01-10 03:48:51,629 | INFO     | ***************************************
[2026-01-09 22:49:30] 2026-01-10 03:48:51,629 | INFO     | 
[2026-01-09 22:49:30] 2026-01-10 03:48:51,630 | INFO     | architecture information:
[2026-01-09 22:49:30] 2026-01-10 03:48:51,630 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:49:30] 2026-01-10 03:48:51,642 | INFO     | cat /etc/os-release:
[2026-01-09 22:49:30] NAME="CentOS Linux"
[2026-01-09 22:49:30] VERSION="7 (Core)"
[2026-01-09 22:49:30] ID="centos"
[2026-01-09 22:49:30] ID_LIKE="rhel fedora"
[2026-01-09 22:49:30] VERSION_ID="7"
[2026-01-09 22:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:49:30] ANSI_COLOR="0;31"
[2026-01-09 22:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:49:30] HOME_URL="https://www.centos.org/"
[2026-01-09 22:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:49:30] 
[2026-01-09 22:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:49:30] 
[2026-01-09 22:49:30] 2026-01-10 03:48:51,643 | INFO     | ***************************************
[2026-01-09 22:49:30] 2026-01-10 03:48:52,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 22:49:30] 2026-01-10 03:48:52,161 | INFO     | sufficient remaining disk space (28426895360 B)
[2026-01-09 22:49:30] 2026-01-10 03:48:52,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:49:30] 2026-01-10 03:48:52,162 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:49:30] 2026-01-10 03:48:52,162 | INFO     | update_server=False
[2026-01-09 22:49:30] 2026-01-10 03:48:52,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:49:30] 2026-01-10 03:48:52,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:49:30] 2026-01-10 03:48:52,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:49:30] 2026-01-10 03:48:52,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:49:30] 2026-01-10 03:48:52,493 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:49:30] 2026-01-10 03:48:52,493 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:49:30] 2026-01-10 03:48:52,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:49:30] 2026-01-10 03:48:52,493 | INFO     | will abort loop
[2026-01-09 22:49:30] 2026-01-10 03:48:52,974 | INFO     | all data control threads have been joined
[2026-01-09 22:49:30] 2026-01-10 03:48:53,167 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,168 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,272 | INFO     | all job control threads have been joined
[2026-01-09 22:49:30] 2026-01-10 03:48:53,499 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,584 | INFO     | all payload control threads have been joined
[2026-01-09 22:49:30] 2026-01-10 03:48:53,629 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,707 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,714 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,894 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,913 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:53,979 | INFO     | [data] control thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:54,168 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:54,277 | INFO     | [job] control thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:54,322 | INFO     | [job] validate thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:54,356 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:54,504 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:54,589 | INFO     | [payload] control thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:48:56,454 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:49:30] 2026-01-10 03:49:23,240 | INFO     | PID=18064 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 22:49:30] 2026-01-10 03:49:23,240 | INFO     | .. there are 2 such processes running
[2026-01-09 22:49:30] 2026-01-10 03:49:23,241 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:49:30] 2026-01-10 03:49:23,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:49:30] 2026-01-10 03:49:23,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:49:30] 2026-01-10 03:49:24,301 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:49:30] 2026-01-10 03:49:25,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381130295104)>', '<ExcThread(monitor, started 140380829886208)>']
[2026-01-09 22:49:30] 2026-01-10 03:49:26,256 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:49:30] 2026-01-10 03:49:26,256 | INFO     | [monitor] control thread has ended
[2026-01-09 22:49:30] 2026-01-10 03:49:30,432 | INFO     | all workflow threads have been joined
[2026-01-09 22:49:30] 2026-01-10 03:49:30,432 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:49:30] 2026-01-10 03:49:30,433 | INFO     | traces error code: 0
[2026-01-09 22:49:30] 2026-01-10 03:49:30,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:49:30] 2026-01-10 03:49:30,568 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:49:30] 2026-01-10 03:49:30,570 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:49:30] 2026-01-10 03:49:30,571 [wrapper] pilotpid: 18064
[2026-01-09 22:49:30] 2026-01-10 03:49:30,573 [wrapper] Pilot exit status: 0
[2026-01-09 22:49:30] 2026-01-10 03:49:30,583 [wrapper] pandaids: 6963188180
[2026-01-09 22:49:30] 2026-01-10 03:49:30,618 [wrapper] cleanup supervisor_pilot 20464 18065
[2026-01-09 22:49:30] 2026-01-10 03:49:30,622 [wrapper] Test setup, not cleaning
[2026-01-09 22:49:30] 2026-01-10 03:49:30,625 [wrapper] apfmon messages muted
[2026-01-09 22:49:30] 2026-01-10 03:49:30,628 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:49:30] 2026-01-10 03:49:30,631 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:49:30]  *** Error codes and diagnostics ***
[2026-01-09 22:49:30]     "exeErrorCode": 0,
[2026-01-09 22:49:30]     "exeErrorDiag": "",
[2026-01-09 22:49:30]     "pilotErrorCode": 0,
[2026-01-09 22:49:30]     "pilotErrorDiag": "",
[2026-01-09 22:49:30]  *** Listing of results directory ***
[2026-01-09 22:49:30] total 440592
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 22:49:30] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:29 queuedata.json
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:49:30] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:16 run_atlas
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:16 job.xml
[2026-01-09 22:49:30] -rw-r--r-- 2 boincer umatlas 222825370 Jan  9 18:16 EVNT.47898824._001432.pool.root.1
[2026-01-09 22:49:30] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:16 start_atlas.sh
[2026-01-09 22:49:30] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:16 shared
[2026-01-09 22:49:30] -rw-r--r-- 2 boincer umatlas    592405 Jan  9 18:16 input.tar.gz
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:16 boinc_lockfile
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 18:16 pandaJob.out
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas        57 Jan  9 18:16 setup.sh.local
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas    989374 Jan  9 18:16 agis_schedconf.cvmfs.json
[2026-01-09 22:49:30] drwx------ 5 boincer umatlas      4096 Jan  9 18:16 pilot3
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas 218914039 Jan  9 22:48 HITS.47898826._037333.pool.root.1
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas       531 Jan  9 22:48 boinc_task_state.xml
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas      1051 Jan  9 22:48 memory_monitor_summary.json
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas        95 Jan  9 22:48 pilot_heartbeat.json
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 22:48 init_data.xml
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas   1516240 Jan  9 22:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas    489683 Jan  9 22:48 log.47898826._037333.job.log.tgz.1
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas      7860 Jan  9 22:48 heartbeat.json
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 22:49 boinc_mmap_file
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas        29 Jan  9 22:49 wrapper_checkpoint.txt
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas      5007 Jan  9 22:49 pilotlog.txt
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas   2264288 Jan  9 22:49 log.47898826._037333.job.log.1
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas       357 Jan  9 22:49 output.list
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas       620 Jan  9 22:49 runtime_log
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas   2775040 Jan  9 22:49 result.tar.gz
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas       663 Jan  9 22:49 xdmNDmvEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmd6gKDmvTre6n.diag
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 22:49 runtime_log.err
[2026-01-09 22:49:30] -rw-r--r-- 1 boincer umatlas     21385 Jan  9 22:49 stderr.txt
[2026-01-09 22:49:30] HITS file was successfully produced:
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas 218914039 Jan  9 22:48 shared/HITS.pool.root.1
[2026-01-09 22:49:30]  *** Contents of shared directory: ***
[2026-01-09 22:49:30] total 434704
[2026-01-09 22:49:30] -rw-r--r-- 2 boincer umatlas 222825370 Jan  9 18:16 ATLAS.root_0
[2026-01-09 22:49:30] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:16 start_atlas.sh
[2026-01-09 22:49:30] -rw-r--r-- 2 boincer umatlas    592405 Jan  9 18:16 input.tar.gz
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas 218914039 Jan  9 22:48 HITS.pool.root.1
[2026-01-09 22:49:30] -rw------- 1 boincer umatlas   2775040 Jan  9 22:49 result.tar.gz
22:49:32 (14389): run_atlas exited; CPU time 124556.984327
22:49:32 (14389): called boinc_finish(0)

</stderr_txt>
]]>

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