Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:18:39 (20979): wrapper (7.7.26015): starting
18:18:39 (20979): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:18:39] Arguments: --nthreads 8
[2026-01-09 18:18:39] Threads: 8
[2026-01-09 18:18:39] Checking for CVMFS
[2026-01-09 18:18:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:18:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:18:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:18:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:18:40] 2.11.2.0 10718 181721 130584 154961 2 56 16248504 18432000 93 130560 0 119693523 99.979 6973111 32316 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:18:40] CVMFS is ok
[2026-01-09 18:18:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:18:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:18:40] Further information can be found at the LHC@home message board.
[2026-01-09 18:18:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:18:40] Checking for apptainer binary...
[2026-01-09 18:18:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:18:40] Running /usr/bin/apptainer --version
[2026-01-09 18:18:40] apptainer version 1.3.2-1.el7
[2026-01-09 18:18:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:18:41] c-206-2.aglt2.org
[2026-01-09 18:18:41] apptainer works
[2026-01-09 18:18:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:18:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:18:41] Starting ATLAS job with PandaID=6962014877
[2026-01-09 18:18:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:38:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:38:36] 2026-01-10 03:38:03,949 | INFO     | intersect: -2970647899.3211555
[2026-01-09 22:38:36] 2026-01-10 03:38:03,949 | INFO     | chi2: 2.1577098171243128
[2026-01-09 22:38:36] 2026-01-10 03:38:03,950 | INFO     | sum of square deviations: 4844974562.5
[2026-01-09 22:38:36] 2026-01-10 03:38:03,952 | INFO     | sum of deviations: 25227024336.000004
[2026-01-09 22:38:36] 2026-01-10 03:38:03,953 | INFO     | mean x: 1768008358.5
[2026-01-09 22:38:36] 2026-01-10 03:38:03,953 | INFO     | mean y: 2488289.36
[2026-01-09 22:38:36] 2026-01-10 03:38:03,953 | INFO     | intersect: -9203254550.106335
[2026-01-09 22:38:36] 2026-01-10 03:38:03,954 | INFO     | chi2: 1.3842933596976472
[2026-01-09 22:38:36] 2026-01-10 03:38:03,954 | INFO     | current chi2=1.3842933596976472 (change=35.84432212749702 %)
[2026-01-09 22:38:36] 2026-01-10 03:38:03,954 | INFO     | sum of square deviations: 4560048290.0
[2026-01-09 22:38:36] 2026-01-10 03:38:03,957 | INFO     | sum of deviations: 24685426015.0
[2026-01-09 22:38:36] 2026-01-10 03:38:03,957 | INFO     | mean x: 1768008206.0
[2026-01-09 22:38:36] 2026-01-10 03:38:03,957 | INFO     | mean y: 2487999.444897959
[2026-01-09 22:38:36] 2026-01-10 03:38:03,957 | INFO     | intersect: -9568471119.3073
[2026-01-09 22:38:36] 2026-01-10 03:38:03,958 | INFO     | chi2: 1.384861792441406
[2026-01-09 22:38:36] 2026-01-10 03:38:03,958 | INFO     | current chi2=1.384861792441406 (change=-0.041063026111956794 %)
[2026-01-09 22:38:36] 2026-01-10 03:38:03,958 | INFO     | right removable region: 244
[2026-01-09 22:38:36] 2026-01-10 03:38:03,959 | INFO     | sum of square deviations: 4844974562.5
[2026-01-09 22:38:36] 2026-01-10 03:38:03,961 | INFO     | sum of deviations: -28848511528.5
[2026-01-09 22:38:36] 2026-01-10 03:38:03,962 | INFO     | mean x: 1768008663.5
[2026-01-09 22:38:36] 2026-01-10 03:38:03,962 | INFO     | mean y: 2499019.324
[2026-01-09 22:38:36] 2026-01-10 03:38:03,962 | INFO     | intersect: 10529782011.940872
[2026-01-09 22:38:36] 2026-01-10 03:38:03,963 | INFO     | chi2: 0.8277113792897853
[2026-01-09 22:38:36] 2026-01-10 03:38:03,963 | INFO     | current chi2=0.8277113792897853 (change=61.639356102438406 %)
[2026-01-09 22:38:36] 2026-01-10 03:38:03,963 | INFO     | sum of square deviations: 4560048290.0
[2026-01-09 22:38:36] 2026-01-10 03:38:03,966 | INFO     | sum of deviations: -30917497481.000008
[2026-01-09 22:38:36] 2026-01-10 03:38:03,966 | INFO     | mean x: 1768008816.0
[2026-01-09 22:38:36] 2026-01-10 03:38:03,966 | INFO     | mean y: 2500106.118367347
[2026-01-09 22:38:36] 2026-01-10 03:38:03,966 | INFO     | intersect: 11989743362.936117
[2026-01-09 22:38:36] 2026-01-10 03:38:03,967 | INFO     | chi2: 0.8116726123503718
[2026-01-09 22:38:36] 2026-01-10 03:38:03,967 | INFO     | current chi2=0.8116726123503718 (change=1.9377245910495433 %)
[2026-01-09 22:38:36] 2026-01-10 03:38:03,967 | INFO     | left removable region: 20
[2026-01-09 22:38:36] 2026-01-10 03:38:03,967 | INFO     | sum of square deviations: 3485088600.0
[2026-01-09 22:38:36] 2026-01-10 03:38:03,969 | INFO     | sum of deviations: -11174465377.000002
[2026-01-09 22:38:36] 2026-01-10 03:38:03,970 | INFO     | mean x: 1768008785.5
[2026-01-09 22:38:36] 2026-01-10 03:38:03,970 | INFO     | mean y: 2507704.464285714
[2026-01-09 22:38:36] 2026-01-10 03:38:03,970 | INFO     | intersect: 5671388822.666438
[2026-01-09 22:38:36] 2026-01-10 03:38:03,971 | INFO     | chi2: 0.021306257854309344
[2026-01-09 22:38:36] 2026-01-10 03:38:03,971 | INFO     | current memory leak: -3.21 B/s (using 224 data points, chi2=0.02)
[2026-01-09 22:38:36] 2026-01-10 03:38:03,971 | INFO     | could have reported an average CPU frequency of 2375 MHz (12 samples)
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | ..............................
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . Timing measurements:
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . get job = 0 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . initial setup = 2 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . payload setup = 6 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . stage-in = 0 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . payload execution = 15515 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,972 | INFO     | . stage-out = 2 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,974 | INFO     | . log creation = 0 s
[2026-01-09 22:38:36] 2026-01-10 03:38:03,974 | INFO     | ..............................
[2026-01-09 22:38:36] 2026-01-10 03:38:04,069 | INFO     | 
[2026-01-09 22:38:36] 2026-01-10 03:38:04,069 | INFO     | job summary report
[2026-01-09 22:38:36] 2026-01-10 03:38:04,069 | INFO     | --------------------------------------------------
[2026-01-09 22:38:36] 2026-01-10 03:38:04,070 | INFO     | PanDA job id: 6962014877
[2026-01-09 22:38:36] 2026-01-10 03:38:04,070 | INFO     | task id: 47898826
[2026-01-09 22:38:36] 2026-01-10 03:38:04,070 | INFO     | errors: (none)
[2026-01-09 22:38:36] 2026-01-10 03:38:04,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:38:36] 2026-01-10 03:38:04,070 | INFO     | pilot state: finished 
[2026-01-09 22:38:36] 2026-01-10 03:38:04,071 | INFO     | transexitcode: 0
[2026-01-09 22:38:36] 2026-01-10 03:38:04,071 | INFO     | exeerrorcode: 0
[2026-01-09 22:38:36] 2026-01-10 03:38:04,071 | INFO     | exeerrordiag: 
[2026-01-09 22:38:36] 2026-01-10 03:38:04,071 | INFO     | exitcode: 0
[2026-01-09 22:38:36] 2026-01-10 03:38:04,071 | INFO     | exitmsg: OK
[2026-01-09 22:38:36] 2026-01-10 03:38:04,072 | INFO     | cpuconsumptiontime: 119948 s
[2026-01-09 22:38:36] 2026-01-10 03:38:04,072 | INFO     | nevents: 400
[2026-01-09 22:38:36] 2026-01-10 03:38:04,072 | INFO     | neventsw: 0
[2026-01-09 22:38:36] 2026-01-10 03:38:04,072 | INFO     | pid: 8617
[2026-01-09 22:38:36] 2026-01-10 03:38:04,072 | INFO     | pgrp: 8617
[2026-01-09 22:38:36] 2026-01-10 03:38:04,073 | INFO     | corecount: 8
[2026-01-09 22:38:36] 2026-01-10 03:38:04,073 | INFO     | event service: False
[2026-01-09 22:38:36] 2026-01-10 03:38:04,073 | INFO     | sizes: {0: 2283793, 1: 2283992, 5: 2284254, 11: 2284310, 15526: 2315314, 15528: 2324496, 15532: 2324634}
[2026-01-09 22:38:36] 2026-01-10 03:38:04,073 | INFO     | --------------------------------------------------
[2026-01-09 22:38:36] 2026-01-10 03:38:04,073 | INFO     | 
[2026-01-09 22:38:36] 2026-01-10 03:38:04,074 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 22:38:36] 2026-01-10 03:38:04,090 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,091 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,091 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,091 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,094 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:38:36] 2026-01-10 03:38:04,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,095 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:38:36] 2026-01-10 03:38:04,095 | INFO     | job 6962014877 has completed (purged errors)
[2026-01-09 22:38:36] 2026-01-10 03:38:04,095 | INFO     | overall cleanup function is called
[2026-01-09 22:38:36] 2026-01-10 03:38:04,340 | WARNING  | process 8617 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 22:38:36] 2026-01-10 03:38:04,405 | INFO     | PID=27828 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 22:38:36] 2026-01-10 03:38:04,406 | INFO     | .. there are 3 such processes running
[2026-01-09 22:38:36] 2026-01-10 03:38:04,463 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:38:36] 2026-01-10 03:38:04,463 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:38:36] 2026-01-10 03:38:04,464 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-09 22:38:36] 2026-01-10 03:38:04,464 | WARNING  | maxPSS not found in memory monitor output
[2026-01-09 22:38:36] 2026-01-10 03:38:04,464 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-6962014877/payload.stdout) since it has not been created yet
[2026-01-09 22:38:36] 2026-01-10 03:38:04,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:38:36] 2026-01-10 03:38:04,477 | INFO     | sufficient remaining disk space (27784118272 B)
[2026-01-09 22:38:36] 2026-01-10 03:38:04,477 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-09 22:38:36] 2026-01-10 03:38:04,477 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6962014877/HITS.47898826._008729.pool.root.1 since it does not exist
[2026-01-09 22:38:36] 2026-01-10 03:38:04,586 | INFO     | number of running child processes to parent process 8617: 1
[2026-01-09 22:38:36] 2026-01-10 03:38:04,586 | INFO     | maximum number of monitored processes: 6
[2026-01-09 22:38:36] 2026-01-10 03:38:04,587 | INFO     | aborting job monitoring since job object (job id=6962014877) has expired
[2026-01-09 22:38:36] 2026-01-10 03:38:05,104 | INFO     | --- collectZombieJob: --- 10, [8617]
[2026-01-09 22:38:36] 2026-01-10 03:38:05,104 | INFO     | zombie collector waiting for pid 8617
[2026-01-09 22:38:36] 2026-01-10 03:38:05,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:38:36] 2026-01-10 03:38:05,104 | INFO     | collected zombie processes
[2026-01-09 22:38:36] 2026-01-10 03:38:05,104 | INFO     | will attempt to kill all subprocesses of pid=8617
[2026-01-09 22:38:36] 2026-01-10 03:38:05,212 | INFO     | process IDs to be killed: [8617] (in reverse order)
[2026-01-09 22:38:36] 2026-01-10 03:38:05,251 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:38:36] 2026-01-10 03:38:05,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:38:36] 2026-01-10 03:38:05,254 | INFO     | did not find any defunct processes belonging to 8617
[2026-01-09 22:38:36] 2026-01-10 03:38:05,256 | INFO     | did not find any defunct processes belonging to 8617
[2026-01-09 22:38:36] 2026-01-10 03:38:05,256 | INFO     | ready for new job
[2026-01-09 22:38:36] 2026-01-10 03:38:05,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:38:36] 2026-01-10 03:38:05,259 | INFO     | ***************************************
[2026-01-09 22:38:36] 2026-01-10 03:38:05,259 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:38:36] 2026-01-10 03:38:05,259 | INFO     | ***************************************
[2026-01-09 22:38:36] 2026-01-10 03:38:05,259 | INFO     | 
[2026-01-09 22:38:36] 2026-01-10 03:38:05,260 | INFO     | architecture information:
[2026-01-09 22:38:36] 2026-01-10 03:38:05,260 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:38:36] 2026-01-10 03:38:05,269 | INFO     | cat /etc/os-release:
[2026-01-09 22:38:36] NAME="CentOS Linux"
[2026-01-09 22:38:36] VERSION="7 (Core)"
[2026-01-09 22:38:36] ID="centos"
[2026-01-09 22:38:36] ID_LIKE="rhel fedora"
[2026-01-09 22:38:36] VERSION_ID="7"
[2026-01-09 22:38:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:38:36] ANSI_COLOR="0;31"
[2026-01-09 22:38:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:38:36] HOME_URL="https://www.centos.org/"
[2026-01-09 22:38:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:38:36] 
[2026-01-09 22:38:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:38:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:38:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:38:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:38:36] 
[2026-01-09 22:38:36] 2026-01-10 03:38:05,270 | INFO     | ***************************************
[2026-01-09 22:38:36] 2026-01-10 03:38:05,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:38:36] 2026-01-10 03:38:05,784 | INFO     | sufficient remaining disk space (27786215424 B)
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | INFO     | update_server=False
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:38:36] 2026-01-10 03:38:05,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:38:36] 2026-01-10 03:38:05,786 | INFO     | aborting loop
[2026-01-09 22:38:36] 2026-01-10 03:38:05,904 | INFO     | all job control threads have been joined
[2026-01-09 22:38:36] 2026-01-10 03:38:06,398 | INFO     | all data control threads have been joined
[2026-01-09 22:38:36] 2026-01-10 03:38:06,789 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:06,789 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:06,791 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:06,910 | INFO     | [job] control thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,135 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,158 | INFO     | all payload control threads have been joined
[2026-01-09 22:38:36] 2026-01-10 03:38:07,178 | INFO     | [job] validate thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,280 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,402 | INFO     | [data] control thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,441 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,453 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,791 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:07,949 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:08,019 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:08,163 | INFO     | [payload] control thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:08,185 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:09,789 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:38:36] 2026-01-10 03:38:20,925 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:38:36] 2026-01-10 03:38:22,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592735995712)>', '<ExcThread(monitor, started 140591753045760)>']
[2026-01-09 22:38:36] 2026-01-10 03:38:27,057 | INFO     | all workflow threads have been joined
[2026-01-09 22:38:36] 2026-01-10 03:38:27,057 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:38:36] 2026-01-10 03:38:27,057 | INFO     | traces error code: 0
[2026-01-09 22:38:36] 2026-01-10 03:38:27,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:38:36] 2026-01-10 03:38:36,607 | INFO     | PID=27828 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 22:38:36] 2026-01-10 03:38:36,612 | INFO     | .. there are 3 such processes running
[2026-01-09 22:38:36] 2026-01-10 03:38:36,612 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:38:36] 2026-01-10 03:38:36,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:38:36] 2026-01-10 03:38:36,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:38:36] 2026-01-10 03:38:36,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:38:36] 2026-01-10 03:38:36,613 | INFO     | [monitor] control thread has ended
[2026-01-09 22:38:36] 2026-01-10 03:38:36,694 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:38:36] 2026-01-10 03:38:36,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:38:36] 2026-01-10 03:38:36,698 [wrapper] pilotpid: 27828
[2026-01-09 22:38:36] 2026-01-10 03:38:36,700 [wrapper] Pilot exit status: 0
[2026-01-09 22:38:36] 2026-01-10 03:38:36,708 [wrapper] pandaids: 6962014877
[2026-01-09 22:38:36] 2026-01-10 03:38:36,737 [wrapper] cleanup supervisor_pilot 19149 27829
[2026-01-09 22:38:36] 2026-01-10 03:38:36,739 [wrapper] Test setup, not cleaning
[2026-01-09 22:38:36] 2026-01-10 03:38:36,741 [wrapper] apfmon messages muted
[2026-01-09 22:38:36] 2026-01-10 03:38:36,743 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:38:36] 2026-01-10 03:38:36,746 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:38:36]  *** Error codes and diagnostics ***
[2026-01-09 22:38:36]     "exeErrorCode": 0,
[2026-01-09 22:38:36]     "exeErrorDiag": "",
[2026-01-09 22:38:36]     "pilotErrorCode": 0,
[2026-01-09 22:38:36]     "pilotErrorDiag": "",
[2026-01-09 22:38:36]  *** Listing of results directory ***
[2026-01-09 22:38:36] total 437904
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-09 22:38:36] -rwx------ 1 boincer umatlas     36322 Jan  7 10:31 runpilot2-wrapper.sh
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 10:31 queuedata.json
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:38:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:18 run_atlas
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:18 job.xml
[2026-01-09 22:38:36] -rw-r--r-- 2 boincer umatlas 224491427 Jan  9 18:18 EVNT.47898824._000366.pool.root.1
[2026-01-09 22:38:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:18 start_atlas.sh
[2026-01-09 22:38:36] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:18 shared
[2026-01-09 22:38:36] -rw-r--r-- 2 boincer umatlas    592391 Jan  9 18:18 input.tar.gz
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:18 boinc_lockfile
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas      2516 Jan  9 18:18 pandaJob.out
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas        57 Jan  9 18:18 setup.sh.local
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas    989374 Jan  9 18:18 agis_schedconf.cvmfs.json
[2026-01-09 22:38:36] drwx------ 5 boincer umatlas      4096 Jan  9 18:18 pilot3
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas      5951 Jan  9 22:31 init_data.xml
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas 214707467 Jan  9 22:37 HITS.47898826._008729.pool.root.1
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas       532 Jan  9 22:37 boinc_task_state.xml
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas        95 Jan  9 22:37 pilot_heartbeat.json
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas      1052 Jan  9 22:37 memory_monitor_summary.json
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas   1516240 Jan  9 22:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas    495523 Jan  9 22:37 log.47898826._008729.job.log.tgz.1
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas      7857 Jan  9 22:38 heartbeat.json
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas        29 Jan  9 22:38 wrapper_checkpoint.txt
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 22:38 boinc_mmap_file
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas       820 Jan  9 22:38 pilotlog.txt
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas   2153527 Jan  9 22:38 log.47898826._008729.job.log.1
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas       357 Jan  9 22:38 output.list
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas       620 Jan  9 22:38 runtime_log
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas   2672640 Jan  9 22:38 result.tar.gz
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas       662 Jan  9 22:38 SHlNDmBgkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwBiKDmAwzi1m.diag
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 22:38 runtime_log.err
[2026-01-09 22:38:36] -rw-r--r-- 1 boincer umatlas     21537 Jan  9 22:38 stderr.txt
[2026-01-09 22:38:36] HITS file was successfully produced:
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas 214707467 Jan  9 22:37 shared/HITS.pool.root.1
[2026-01-09 22:38:36]  *** Contents of shared directory: ***
[2026-01-09 22:38:36] total 432124
[2026-01-09 22:38:36] -rw-r--r-- 2 boincer umatlas 224491427 Jan  9 18:18 ATLAS.root_0
[2026-01-09 22:38:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:18 start_atlas.sh
[2026-01-09 22:38:36] -rw-r--r-- 2 boincer umatlas    592391 Jan  9 18:18 input.tar.gz
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas 214707467 Jan  9 22:37 HITS.pool.root.1
[2026-01-09 22:38:36] -rw------- 1 boincer umatlas   2672640 Jan  9 22:38 result.tar.gz
22:38:38 (20979): run_atlas exited; CPU time 120146.795897
22:38:38 (20979): called boinc_finish(0)

</stderr_txt>
]]>

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