Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:27:50 (4244): wrapper (7.7.26015): starting
12:27:50 (4244): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 12:27:50] Arguments: --nthreads 8
[2026-01-10 12:27:50] Threads: 8
[2026-01-10 12:27:50] Checking for CVMFS
[2026-01-10 12:27:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:27:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:27:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:27:54] 2.11.2.0 15502 36777 101420 154978 1 60 24511778 25165824 96 130560 0 17315983 99.872 9440919 3611 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 12:27:54] CVMFS is ok
[2026-01-10 12:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:27:54] Checking for apptainer binary...
[2026-01-10 12:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:27:54] Running /usr/bin/apptainer --version
[2026-01-10 12:27:54] apptainer version 1.3.2-1.el7
[2026-01-10 12:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:28:13] cg-vwn488.simple-grid.lan
[2026-01-10 12:28:13] apptainer works
[2026-01-10 12:28:13] Set ATHENA_PROC_NUMBER=8
[2026-01-10 12:28:13] Set ATHENA_CORE_NUMBER=8
[2026-01-10 12:28:13] Starting ATLAS job with PandaID=6963189410
[2026-01-10 12:28:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:40:23]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:40:23] 2026-01-10 16:39:33,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 17:40:23] 2026-01-10 16:39:33,581 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:40:23] 2026-01-10 16:39:33,581 | INFO     | sum of square deviations: 7641036290.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,584 | INFO     | sum of deviations: 187225987158.00003
[2026-01-10 17:40:23] 2026-01-10 16:39:33,584 | INFO     | mean x: 1768054174.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,585 | INFO     | mean y: 2411257.615120275
[2026-01-10 17:40:23] 2026-01-10 16:39:33,585 | INFO     | intersect: -43319682174.815414
[2026-01-10 17:40:23] 2026-01-10 16:39:33,585 | INFO     | chi2: 9.392943245550985
[2026-01-10 17:40:23] 2026-01-10 16:39:33,586 | INFO     | sum of square deviations: 7253894147.5
[2026-01-10 17:40:23] 2026-01-10 16:39:33,588 | INFO     | sum of deviations: 202919737117.5
[2026-01-10 17:40:23] 2026-01-10 16:39:33,589 | INFO     | mean x: 1768054021.5
[2026-01-10 17:40:23] 2026-01-10 16:39:33,589 | INFO     | mean y: 2417334.1293706293
[2026-01-10 17:40:23] 2026-01-10 16:39:33,589 | INFO     | intersect: -49456955791.12737
[2026-01-10 17:40:23] 2026-01-10 16:39:33,589 | INFO     | chi2: 8.691906135428308
[2026-01-10 17:40:23] 2026-01-10 16:39:33,590 | INFO     | current chi2=8.691906135428308 (change=7.463444543378099 %)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,590 | INFO     | right removable region: 285
[2026-01-10 17:40:23] 2026-01-10 16:39:33,590 | INFO     | sum of square deviations: 7253894147.5
[2026-01-10 17:40:23] 2026-01-10 16:39:33,593 | INFO     | sum of deviations: 84995389196.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,593 | INFO     | mean x: 1768054326.5
[2026-01-10 17:40:23] 2026-01-10 16:39:33,593 | INFO     | mean y: 2451511.062937063
[2026-01-10 17:40:23] 2026-01-10 16:39:33,593 | INFO     | intersect: -20714209436.123726
[2026-01-10 17:40:23] 2026-01-10 16:39:33,594 | INFO     | chi2: 4.212299891481767
[2026-01-10 17:40:23] 2026-01-10 16:39:33,594 | INFO     | current chi2=4.212299891481767 (change=55.15463277735715 %)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,594 | INFO     | sum of square deviations: 6880054580.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,597 | INFO     | sum of deviations: 5749922647.000004
[2026-01-10 17:40:23] 2026-01-10 16:39:33,597 | INFO     | mean x: 1768054479.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,597 | INFO     | mean y: 2483808.71886121
[2026-01-10 17:40:23] 2026-01-10 16:39:33,598 | INFO     | intersect: -1475146400.7106538
[2026-01-10 17:40:23] 2026-01-10 16:39:33,598 | INFO     | chi2: 1.3211951056532203
[2026-01-10 17:40:23] 2026-01-10 16:39:33,598 | INFO     | current chi2=1.3211951056532203 (change=68.63482801105927 %)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,599 | INFO     | sum of square deviations: 6519285025.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,601 | INFO     | sum of deviations: -19611130218.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,601 | INFO     | mean x: 1768054631.5
[2026-01-10 17:40:23] 2026-01-10 16:39:33,601 | INFO     | mean y: 2494446.8768115942
[2026-01-10 17:40:23] 2026-01-10 16:39:33,602 | INFO     | intersect: 5321106760.638091
[2026-01-10 17:40:23] 2026-01-10 16:39:33,602 | INFO     | chi2: 0.8525763501554848
[2026-01-10 17:40:23] 2026-01-10 16:39:33,602 | INFO     | current chi2=0.8525763501554848 (change=35.46930756044867 %)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,603 | INFO     | sum of square deviations: 6171352920.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,605 | INFO     | sum of deviations: -13352797703.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,605 | INFO     | mean x: 1768054784.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,606 | INFO     | mean y: 2491686.7601476014
[2026-01-10 17:40:23] 2026-01-10 16:39:33,606 | INFO     | intersect: 3827986382.1070085
[2026-01-10 17:40:23] 2026-01-10 16:39:33,606 | INFO     | chi2: 0.8266832191820546
[2026-01-10 17:40:23] 2026-01-10 16:39:33,606 | INFO     | current chi2=0.8266832191820546 (change=3.0370454175403907 %)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,606 | INFO     | left removable region: 40
[2026-01-10 17:40:23] 2026-01-10 16:39:33,607 | INFO     | sum of square deviations: 4560048290.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,609 | INFO     | sum of deviations: 6665108026.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,609 | INFO     | mean x: 1768055211.0
[2026-01-10 17:40:23] 2026-01-10 16:39:33,609 | INFO     | mean y: 2498909.7959183673
[2026-01-10 17:40:23] 2026-01-10 16:39:33,609 | INFO     | intersect: -2581745428.8198957
[2026-01-10 17:40:23] 2026-01-10 16:39:33,610 | INFO     | chi2: 0.0014946424174943952
[2026-01-10 17:40:23] 2026-01-10 16:39:33,610 | INFO     | current memory leak: 1.46 B/s (using 245 data points, chi2=0.00)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,610 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | ..............................
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . Timing measurements:
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . get job = 0 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . initial setup = 11 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . payload setup = 159 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . stage-in = 0 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . payload execution = 17899 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,611 | INFO     | . stage-out = 9 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,612 | INFO     | . log creation = 1 s
[2026-01-10 17:40:23] 2026-01-10 16:39:33,612 | INFO     | ..............................
[2026-01-10 17:40:23] 2026-01-10 16:39:34,048 | INFO     | 
[2026-01-10 17:40:23] 2026-01-10 16:39:34,048 | INFO     | job summary report
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | --------------------------------------------------
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | PanDA job id: 6963189410
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | task id: 47898826
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | errors: (none)
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | pilot state: finished 
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | transexitcode: 0
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | exeerrorcode: 0
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | exeerrordiag: 
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | exitcode: 0
[2026-01-10 17:40:23] 2026-01-10 16:39:34,049 | INFO     | exitmsg: OK
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | cpuconsumptiontime: 73511 s
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | nevents: 400
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | neventsw: 0
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | pid: 14428
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | pgrp: 14428
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | corecount: 8
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | event service: False
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2284027, 12: 2284027, 23: 2284055, 34: 2284083, 44: 2284239, 55: 2284267, 66: 2284295, 77: 2284323, 87: 2284379, 98: 2284687, 10
[2026-01-10 17:40:23] 2026-01-10 16:39:34,050 | INFO     | --------------------------------------------------
[2026-01-10 17:40:23] 2026-01-10 16:39:34,051 | INFO     | 
[2026-01-10 17:40:23] 2026-01-10 16:39:34,051 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 17:40:23] 2026-01-10 16:39:34,059 | INFO     | time since job start (18413s) is within the limit (349056.0s)
[2026-01-10 17:40:23] 2026-01-10 16:39:34,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,656 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,656 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,656 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | job 6963189410 has completed (purged errors)
[2026-01-10 17:40:23] 2026-01-10 16:39:34,658 | INFO     | overall cleanup function is called
[2026-01-10 17:40:23] 2026-01-10 16:39:35,667 | INFO     | --- collectZombieJob: --- 10, [14428]
[2026-01-10 17:40:23] 2026-01-10 16:39:35,667 | INFO     | zombie collector waiting for pid 14428
[2026-01-10 17:40:23] 2026-01-10 16:39:35,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:40:23] 2026-01-10 16:39:35,668 | INFO     | collected zombie processes
[2026-01-10 17:40:23] 2026-01-10 16:39:35,668 | INFO     | will attempt to kill all subprocesses of pid=14428
[2026-01-10 17:40:23] 2026-01-10 16:39:35,752 | INFO     | process IDs to be killed: [14428] (in reverse order)
[2026-01-10 17:40:23] 2026-01-10 16:39:36,611 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:40:23] 2026-01-10 16:39:36,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:40:23] 2026-01-10 16:39:36,614 | INFO     | did not find any defunct processes belonging to 14428
[2026-01-10 17:40:23] 2026-01-10 16:39:36,615 | INFO     | did not find any defunct processes belonging to 14428
[2026-01-10 17:40:23] 2026-01-10 16:39:36,616 | INFO     | ready for new job
[2026-01-10 17:40:23] 2026-01-10 16:39:36,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:40:23] 2026-01-10 16:39:36,618 | INFO     | ***************************************
[2026-01-10 17:40:23] 2026-01-10 16:39:36,618 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:40:23] 2026-01-10 16:39:36,618 | INFO     | ***************************************
[2026-01-10 17:40:23] 2026-01-10 16:39:36,618 | INFO     | 
[2026-01-10 17:40:23] 2026-01-10 16:39:36,619 | INFO     | pilot is running in a VM
[2026-01-10 17:40:23] 2026-01-10 16:39:36,619 | INFO     | architecture information:
[2026-01-10 17:40:23] 2026-01-10 16:39:36,631 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:40:23] 2026-01-10 16:39:36,917 | INFO     | cat /etc/os-release:
[2026-01-10 17:40:23] NAME="CentOS Linux"
[2026-01-10 17:40:23] VERSION="7 (Core)"
[2026-01-10 17:40:23] ID="centos"
[2026-01-10 17:40:23] ID_LIKE="rhel fedora"
[2026-01-10 17:40:23] VERSION_ID="7"
[2026-01-10 17:40:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:40:23] ANSI_COLOR="0;31"
[2026-01-10 17:40:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:40:23] HOME_URL="https://www.centos.org/"
[2026-01-10 17:40:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:40:23] 
[2026-01-10 17:40:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:40:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:40:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:40:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:40:23] 
[2026-01-10 17:40:23] 2026-01-10 16:39:36,917 | INFO     | ***************************************
[2026-01-10 17:40:23] 2026-01-10 16:39:37,420 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 17:40:23] 2026-01-10 16:39:37,684 | INFO     | sufficient remaining disk space (497738055680 B)
[2026-01-10 17:40:23] 2026-01-10 16:39:37,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:40:23] 2026-01-10 16:39:37,684 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:40:23] 2026-01-10 16:39:37,684 | INFO     | update_server=False
[2026-01-10 17:40:23] 2026-01-10 16:39:37,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:40:23] 2026-01-10 16:39:37,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:40:23] 2026-01-10 16:39:37,685 | INFO     | aborting loop
[2026-01-10 17:40:23] 2026-01-10 16:39:37,796 | INFO     | all data control threads have been joined
[2026-01-10 17:40:23] 2026-01-10 16:39:38,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:40:23] 2026-01-10 16:39:38,690 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:38,691 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:38,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:40:23] 2026-01-10 16:39:38,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:40:23] 2026-01-10 16:39:38,802 | INFO     | [data] control thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:38,860 | INFO     | [job] validate thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:39,141 | INFO     | all job control threads have been joined
[2026-01-10 17:40:23] 2026-01-10 16:39:39,197 | INFO     | all payload control threads have been joined
[2026-01-10 17:40:23] 2026-01-10 16:39:39,336 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:39,465 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:39,476 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:39,598 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:39,727 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:39,748 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:40,111 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:40,147 | INFO     | [job] control thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:40,162 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:40,185 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:40,203 | INFO     | [payload] control thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:39:42,775 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:40:23] 2026-01-10 16:40:07,213 | INFO     | PID=7967 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 17:40:23] 2026-01-10 16:40:07,213 | INFO     | .. there are 2 such processes running
[2026-01-10 17:40:23] 2026-01-10 16:40:07,213 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:40:23] 2026-01-10 16:40:07,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:40:23] 2026-01-10 16:40:07,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:40:23] 2026-01-10 16:40:12,562 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:40:23] 2026-01-10 16:40:13,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378367158080)>', '<ExcThread(monitor, started 140377684162304)>']
[2026-01-10 17:40:23] 2026-01-10 16:40:14,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:40:23] 2026-01-10 16:40:14,255 | INFO     | [monitor] control thread has ended
[2026-01-10 17:40:23] 2026-01-10 16:40:18,469 | INFO     | all workflow threads have been joined
[2026-01-10 17:40:23] 2026-01-10 16:40:18,469 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:40:23] 2026-01-10 16:40:18,470 | INFO     | traces error code: 0
[2026-01-10 17:40:23] 2026-01-10 16:40:18,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:40:23] 2026-01-10 16:40:18,879 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:40:23] 2026-01-10 16:40:18,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:40:23] 2026-01-10 16:40:19,063 [wrapper] pilotpid: 7967
[2026-01-10 17:40:23] 2026-01-10 16:40:19,148 [wrapper] Pilot exit status: 0
[2026-01-10 17:40:23] 2026-01-10 16:40:19,632 [wrapper] pandaids: 6963189410
[2026-01-10 17:40:23] 2026-01-10 16:40:20,801 [wrapper] cleanup supervisor_pilot 26046 7968
[2026-01-10 17:40:23] 2026-01-10 16:40:20,923 [wrapper] Test setup, not cleaning
[2026-01-10 17:40:23] 2026-01-10 16:40:21,034 [wrapper] apfmon messages muted
[2026-01-10 17:40:23] 2026-01-10 16:40:21,137 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:40:23] 2026-01-10 16:40:21,242 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:40:23]  *** Error codes and diagnostics ***
[2026-01-10 17:40:23]     "exeErrorCode": 0,
[2026-01-10 17:40:23]     "exeErrorDiag": "",
[2026-01-10 17:40:23]     "pilotErrorCode": 0,
[2026-01-10 17:40:23]     "pilotErrorDiag": "",
[2026-01-10 17:40:23]  *** Listing of results directory ***
[2026-01-10 17:40:23] total 440888
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 17:40:23] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc       100 Jan 10 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:40:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 12:27 run_atlas
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc       105 Jan 10 12:27 job.xml
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc      6390 Jan 10 12:27 init_data.xml
[2026-01-10 17:40:23] -rw-r--r--. 2 boinc boinc 223534351 Jan 10 12:27 EVNT.47898824._001470.pool.root.1
[2026-01-10 17:40:23] -rw-r--r--. 2 boinc boinc     15847 Jan 10 12:27 start_atlas.sh
[2026-01-10 17:40:23] drwxrwx--x. 2 boinc boinc        68 Jan 10 12:27 shared
[2026-01-10 17:40:23] -rw-r--r--. 2 boinc boinc    592398 Jan 10 12:27 input.tar.gz
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc         0 Jan 10 12:27 boinc_lockfile
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc      2520 Jan 10 12:28 pandaJob.out
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc    989564 Jan 10 12:32 agis_schedconf.cvmfs.json
[2026-01-10 17:40:23] drwx------. 5 boinc boinc      4096 Jan 10 12:32 pilot3
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc 218113098 Jan 10 17:36 HITS.47898826._038279.pool.root.1
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc       531 Jan 10 17:36 boinc_task_state.xml
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc      1020 Jan 10 17:37 memory_monitor_summary.json
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc   1516240 Jan 10 17:37 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc    500576 Jan 10 17:37 log.47898826._038279.job.log.tgz.1
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc        95 Jan 10 17:39 pilot_heartbeat.json
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc      7782 Jan 10 17:39 heartbeat.json
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc      4883 Jan 10 17:40 pilotlog.txt
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc        28 Jan 10 17:40 wrapper_checkpoint.txt
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc      8192 Jan 10 17:40 boinc_mmap_file
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc   2458142 Jan 10 17:40 log.47898826._038279.job.log.1
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc       357 Jan 10 17:40 output.list
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc       620 Jan 10 17:40 runtime_log
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc   2979840 Jan 10 17:40 result.tar.gz
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc      8817 Jan 10 17:40 runtime_log.err
[2026-01-10 17:40:23] -rw-------. 1 boinc boinc       657 Jan 10 17:40 F6aKDmeCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKCmKDmIFaKbm.diag
[2026-01-10 17:40:23] -rw-r--r--. 1 boinc boinc     20622 Jan 10 17:40 stderr.txt
[2026-01-10 17:40:24] HITS file was successfully produced:
[2026-01-10 17:40:24] -rw-------. 1 boinc boinc 218113098 Jan 10 17:36 shared/HITS.pool.root.1
[2026-01-10 17:40:24]  *** Contents of shared directory: ***
[2026-01-10 17:40:24] total 434808
[2026-01-10 17:40:24] -rw-r--r--. 2 boinc boinc 223534351 Jan 10 12:27 ATLAS.root_0
[2026-01-10 17:40:24] -rw-r--r--. 2 boinc boinc     15847 Jan 10 12:27 start_atlas.sh
[2026-01-10 17:40:24] -rw-r--r--. 2 boinc boinc    592398 Jan 10 12:27 input.tar.gz
[2026-01-10 17:40:24] -rw-------. 1 boinc boinc 218113098 Jan 10 17:36 HITS.pool.root.1
[2026-01-10 17:40:24] -rw-------. 1 boinc boinc   2979840 Jan 10 17:40 result.tar.gz
17:40:25 (4244): run_atlas exited; CPU time 73680.569657
17:40:25 (4244): called boinc_finish(0)

</stderr_txt>
]]>

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