Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:15:42 (17114): wrapper (7.7.26015): starting
18:15:42 (17114): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:15:42] Arguments: --nthreads 8
[2026-01-09 18:15:42] Threads: 8
[2026-01-09 18:15:42] Checking for CVMFS
[2026-01-09 18:15:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:15:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:15:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:15:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:15:42] 2.11.2.0 2830 137305 83124 154960 1 81 18096841 20275201 1 130560 0 37800929 99.881 7825612 32990 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:15:42] CVMFS is ok
[2026-01-09 18:15:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:15:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:15:42] Further information can be found at the LHC@home message board.
[2026-01-09 18:15:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:15:42] Checking for apptainer binary...
[2026-01-09 18:15:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:15:42] Running /usr/bin/apptainer --version
[2026-01-09 18:15:42] apptainer version 1.3.2-1.el7
[2026-01-09 18:15:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:15:44] c-204-20.aglt2.org
[2026-01-09 18:15:44] apptainer works
[2026-01-09 18:15:44] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:15:44] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:15:44] Starting ATLAS job with PandaID=6963187171
[2026-01-09 18:15:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:10:55 (18024): wrapper (7.7.26015): starting
20:10:55 (18024): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 20:10:55] Arguments: --nthreads 8
[2026-01-09 20:10:55] Threads: 8
[2026-01-09 20:10:55] This job has been restarted, cleaning up previous attempt
[2026-01-09 20:10:55] Checking for CVMFS
[2026-01-09 20:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:10:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:10:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:10:56] 2.11.2.0 2830 137420 81320 154962 1 18 18247199 20275200 1 130560 0 37878767 99.881 7828414 32992 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 20:10:56] CVMFS is ok
[2026-01-09 20:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:10:56] Further information can be found at the LHC@home message board.
[2026-01-09 20:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:10:56] Checking for apptainer binary...
[2026-01-09 20:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:10:56] Running /usr/bin/apptainer --version
[2026-01-09 20:10:56] apptainer version 1.3.2-1.el7
[2026-01-09 20:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:10:58] c-204-20.aglt2.org
[2026-01-09 20:10:58] apptainer works
[2026-01-09 20:10:58] Set ATHENA_PROC_NUMBER=8
[2026-01-09 20:10:58] Set ATHENA_CORE_NUMBER=8
[2026-01-09 20:10:58] Starting ATLAS job with PandaID=6963187171
[2026-01-09 20:10:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:07:37]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:07:37] 2026-01-10 04:06:43,015 | INFO     | monitor loop #776: job 0:6963187171 is in state 'finished'
[2026-01-09 23:07:37] 2026-01-10 04:06:43,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:07:37] 2026-01-10 04:06:43,400 | INFO     | time since job start (10529s) is within the limit (349056.0s)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,399 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 23:07:37] 2026-01-10 04:06:44,409 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1645.875
[2026-01-09 23:07:37] 2026-01-10 04:06:44,411 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963187171/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,412 | INFO     | extracted standard info from prmon json
[2026-01-09 23:07:37] 2026-01-10 04:06:44,412 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:07:37] 2026-01-10 04:06:44,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:07:37] 2026-01-10 04:06:44,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:07:37] 2026-01-10 04:06:44,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:07:37] 2026-01-10 04:06:44,416 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:07:37] 2026-01-10 04:06:44,417 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,418 | INFO     | sum of deviations: 24677381487.500004
[2026-01-09 23:07:37] 2026-01-10 04:06:44,418 | INFO     | mean x: 1768012721.5
[2026-01-09 23:07:37] 2026-01-10 04:06:44,418 | INFO     | mean y: 2485693.6220930233
[2026-01-09 23:07:37] 2026-01-10 04:06:44,418 | INFO     | intersect: -27650076392.794346
[2026-01-09 23:07:37] 2026-01-10 04:06:44,418 | INFO     | chi2: 1.435628870022613
[2026-01-09 23:07:37] 2026-01-10 04:06:44,419 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,420 | INFO     | sum of deviations: 23964869127.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,420 | INFO     | mean x: 1768012569.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,420 | INFO     | mean y: 2484880.3293413175
[2026-01-09 23:07:37] 2026-01-10 04:06:44,420 | INFO     | intersect: -29336706826.729733
[2026-01-09 23:07:37] 2026-01-10 04:06:44,420 | INFO     | chi2: 1.4365579459342168
[2026-01-09 23:07:37] 2026-01-10 04:06:44,420 | INFO     | current chi2=1.4365579459342168 (change=-0.06471560519601527 %)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,421 | INFO     | right removable region: 166
[2026-01-09 23:07:37] 2026-01-10 04:06:44,421 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,422 | INFO     | sum of deviations: -390197846.0000003
[2026-01-09 23:07:37] 2026-01-10 04:06:44,422 | INFO     | mean x: 1768012874.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,422 | INFO     | mean y: 2513897.431137725
[2026-01-09 23:07:37] 2026-01-10 04:06:44,422 | INFO     | intersect: 480216960.26524377
[2026-01-09 23:07:37] 2026-01-10 04:06:44,422 | INFO     | chi2: 0.03641190211329646
[2026-01-09 23:07:37] 2026-01-10 04:06:44,423 | INFO     | current chi2=0.03641190211329646 (change=97.463696720398 %)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,423 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 23:07:37] 2026-01-10 04:06:44,424 | INFO     | sum of deviations: -3742390229.4999995
[2026-01-09 23:07:37] 2026-01-10 04:06:44,424 | INFO     | mean x: 1768013026.5
[2026-01-09 23:07:37] 2026-01-10 04:06:44,424 | INFO     | mean y: 2517925.1296296297
[2026-01-09 23:07:37] 2026-01-10 04:06:44,424 | INFO     | intersect: 5021638306.766934
[2026-01-09 23:07:37] 2026-01-10 04:06:44,424 | INFO     | chi2: 0.006226317012154894
[2026-01-09 23:07:37] 2026-01-10 04:06:44,424 | INFO     | current chi2=0.006226317012154894 (change=82.90032475430267 %)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,425 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | sum of deviations: -4245541257.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | mean x: 1768013179.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | mean y: 2518567.535031847
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | intersect: 6257972093.032038
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | chi2: 0.005099813512753208
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | current chi2=0.005099813512753208 (change=18.092613935373798 %)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,426 | INFO     | left removable region: 30
[2026-01-09 23:07:37] 2026-01-10 04:06:44,427 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,427 | INFO     | sum of deviations: -2844518724.5
[2026-01-09 23:07:37] 2026-01-10 04:06:44,428 | INFO     | mean x: 1768013453.5
[2026-01-09 23:07:37] 2026-01-10 04:06:44,428 | INFO     | mean y: 2516784.257352941
[2026-01-09 23:07:37] 2026-01-10 04:06:44,428 | INFO     | intersect: 6450482124.43815
[2026-01-09 23:07:37] 2026-01-10 04:06:44,428 | INFO     | chi2: 0.004815376138161752
[2026-01-09 23:07:37] 2026-01-10 04:06:44,428 | INFO     | current memory leak: -3.65 B/s (using 136 data points, chi2=0.00)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | could have reported an average CPU frequency of 2014 MHz (9 samples)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | ..............................
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | . Timing measurements:
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | . get job = 0 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | . initial setup = 1 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | . payload setup = 8 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,429 | INFO     | . stage-in = 0 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,430 | INFO     | . payload execution = 10488 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,430 | INFO     | . stage-out = 2 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,430 | INFO     | . log creation = 0 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,430 | INFO     | ..............................
[2026-01-09 23:07:37] 2026-01-10 04:06:44,526 | INFO     | 
[2026-01-09 23:07:37] 2026-01-10 04:06:44,526 | INFO     | job summary report
[2026-01-09 23:07:37] 2026-01-10 04:06:44,526 | INFO     | --------------------------------------------------
[2026-01-09 23:07:37] 2026-01-10 04:06:44,527 | INFO     | PanDA job id: 6963187171
[2026-01-09 23:07:37] 2026-01-10 04:06:44,527 | INFO     | task id: 47898826
[2026-01-09 23:07:37] 2026-01-10 04:06:44,527 | INFO     | errors: (none)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:07:37] 2026-01-10 04:06:44,527 | INFO     | pilot state: finished 
[2026-01-09 23:07:37] 2026-01-10 04:06:44,527 | INFO     | transexitcode: 0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,528 | INFO     | exeerrorcode: 0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,528 | INFO     | exeerrordiag: 
[2026-01-09 23:07:37] 2026-01-10 04:06:44,528 | INFO     | exitcode: 0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,528 | INFO     | exitmsg: OK
[2026-01-09 23:07:37] 2026-01-10 04:06:44,528 | INFO     | cpuconsumptiontime: 78887 s
[2026-01-09 23:07:37] 2026-01-10 04:06:44,528 | INFO     | nevents: 400
[2026-01-09 23:07:37] 2026-01-10 04:06:44,529 | INFO     | neventsw: 0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,529 | INFO     | pid: 29041
[2026-01-09 23:07:37] 2026-01-10 04:06:44,529 | INFO     | pgrp: 29041
[2026-01-09 23:07:37] 2026-01-10 04:06:44,529 | INFO     | corecount: 8
[2026-01-09 23:07:37] 2026-01-10 04:06:44,529 | INFO     | event service: False
[2026-01-09 23:07:37] 2026-01-10 04:06:44,529 | INFO     | sizes: {0: 2283971, 1: 2283971, 6: 2284261, 11: 2284289, 10500: 2313178, 10503: 2322176, 10504: 2322360, 10513: 2322618}
[2026-01-09 23:07:37] 2026-01-10 04:06:44,530 | INFO     | --------------------------------------------------
[2026-01-09 23:07:37] 2026-01-10 04:06:44,530 | INFO     | 
[2026-01-09 23:07:37] 2026-01-10 04:06:44,530 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 23:07:37] 2026-01-10 04:06:44,558 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,558 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,558 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,559 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,562 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,562 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:07:37] 2026-01-10 04:06:44,562 | INFO     | job 6963187171 has completed (purged errors)
[2026-01-09 23:07:37] 2026-01-10 04:06:44,562 | INFO     | overall cleanup function is called
[2026-01-09 23:07:37] 2026-01-10 04:06:45,571 | INFO     | --- collectZombieJob: --- 10, [29041]
[2026-01-09 23:07:37] 2026-01-10 04:06:45,571 | INFO     | zombie collector waiting for pid 29041
[2026-01-09 23:07:37] 2026-01-10 04:06:45,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:07:37] 2026-01-10 04:06:45,572 | INFO     | collected zombie processes
[2026-01-09 23:07:37] 2026-01-10 04:06:45,572 | INFO     | will attempt to kill all subprocesses of pid=29041
[2026-01-09 23:07:37] 2026-01-10 04:06:45,661 | INFO     | process IDs to be killed: [29041] (in reverse order)
[2026-01-09 23:07:37] 2026-01-10 04:06:45,718 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:07:37] 2026-01-10 04:06:45,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:07:37] 2026-01-10 04:06:45,723 | INFO     | did not find any defunct processes belonging to 29041
[2026-01-09 23:07:37] 2026-01-10 04:06:45,727 | INFO     | did not find any defunct processes belonging to 29041
[2026-01-09 23:07:37] 2026-01-10 04:06:45,727 | INFO     | ready for new job
[2026-01-09 23:07:37] 2026-01-10 04:06:45,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:07:37] 2026-01-10 04:06:45,729 | INFO     | ***************************************
[2026-01-09 23:07:37] 2026-01-10 04:06:45,730 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:07:37] 2026-01-10 04:06:45,730 | INFO     | ***************************************
[2026-01-09 23:07:37] 2026-01-10 04:06:45,730 | INFO     | 
[2026-01-09 23:07:37] 2026-01-10 04:06:45,730 | INFO     | architecture information:
[2026-01-09 23:07:37] 2026-01-10 04:06:45,731 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:07:37] 2026-01-10 04:06:45,748 | INFO     | cat /etc/os-release:
[2026-01-09 23:07:37] NAME="CentOS Linux"
[2026-01-09 23:07:37] VERSION="7 (Core)"
[2026-01-09 23:07:37] ID="centos"
[2026-01-09 23:07:37] ID_LIKE="rhel fedora"
[2026-01-09 23:07:37] VERSION_ID="7"
[2026-01-09 23:07:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:07:37] ANSI_COLOR="0;31"
[2026-01-09 23:07:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:07:37] HOME_URL="https://www.centos.org/"
[2026-01-09 23:07:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:07:37] 
[2026-01-09 23:07:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:07:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:07:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:07:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:07:37] 
[2026-01-09 23:07:37] 2026-01-10 04:06:45,748 | INFO     | ***************************************
[2026-01-09 23:07:37] 2026-01-10 04:06:46,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 23:07:37] 2026-01-10 04:06:46,271 | INFO     | sufficient remaining disk space (18662555648 B)
[2026-01-09 23:07:37] 2026-01-10 04:06:46,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:07:37] 2026-01-10 04:06:46,272 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:07:37] 2026-01-10 04:06:46,272 | INFO     | update_server=False
[2026-01-09 23:07:37] 2026-01-10 04:06:46,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:07:37] 2026-01-10 04:06:46,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:07:37] 2026-01-10 04:06:46,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:07:37] 2026-01-10 04:06:46,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:07:37] 2026-01-10 04:06:46,462 | INFO     | all data control threads have been joined
[2026-01-09 23:07:37] 2026-01-10 04:06:46,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:07:37] 2026-01-10 04:06:46,524 | INFO     | aborting loop
[2026-01-09 23:07:37] 2026-01-10 04:06:46,973 | INFO     | all job control threads have been joined
[2026-01-09 23:07:37] 2026-01-10 04:06:47,275 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,278 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,467 | INFO     | [data] control thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,529 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,622 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,695 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,695 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,712 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:47,754 | INFO     | all payload control threads have been joined
[2026-01-09 23:07:37] 2026-01-10 04:06:47,979 | INFO     | [job] control thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:48,122 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:48,126 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:48,279 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:48,713 | INFO     | [job] validate thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:48,746 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:48,759 | INFO     | [payload] control thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:06:50,280 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:07:37] 2026-01-10 04:07:16,619 | INFO     | PID=22674 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 23:07:37] 2026-01-10 04:07:16,620 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:07:37] 2026-01-10 04:07:16,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:07:37] 2026-01-10 04:07:16,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:07:37] 2026-01-10 04:07:30,914 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:07:37] 2026-01-10 04:07:31,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758764496704)>', '<ExcThread(monitor, started 139758453888768)>']
[2026-01-09 23:07:37] 2026-01-10 04:07:32,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:07:37] 2026-01-10 04:07:32,702 | INFO     | [monitor] control thread has ended
[2026-01-09 23:07:37] 2026-01-10 04:07:36,780 | INFO     | all workflow threads have been joined
[2026-01-09 23:07:37] 2026-01-10 04:07:36,780 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:07:37] 2026-01-10 04:07:36,780 | INFO     | traces error code: 0
[2026-01-09 23:07:37] 2026-01-10 04:07:36,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:07:37] 2026-01-10 04:07:36,888 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:07:37] 2026-01-10 04:07:36,893 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:07:37] 2026-01-10 04:07:36,898 [wrapper] pilotpid: 22674
[2026-01-09 23:07:37] 2026-01-10 04:07:36,902 [wrapper] Pilot exit status: 0
[2026-01-09 23:07:37] 2026-01-10 04:07:36,923 [wrapper] pandaids: 6963187171 6963187171
[2026-01-09 23:07:37] 2026-01-10 04:07:36,973 [wrapper] cleanup supervisor_pilot  6302 22675
[2026-01-09 23:07:37] 2026-01-10 04:07:36,979 [wrapper] Test setup, not cleaning
[2026-01-09 23:07:37] 2026-01-10 04:07:36,984 [wrapper] apfmon messages muted
[2026-01-09 23:07:37] 2026-01-10 04:07:36,989 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:07:37] 2026-01-10 04:07:36,994 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:07:37]  *** Error codes and diagnostics ***
[2026-01-09 23:07:37]     "exeErrorCode": 0,
[2026-01-09 23:07:37]     "exeErrorDiag": "",
[2026-01-09 23:07:37]     "pilotErrorCode": 0,
[2026-01-09 23:07:37]     "pilotErrorDiag": "",
[2026-01-09 23:07:37]  *** Listing of results directory ***
[2026-01-09 23:07:37] total 654484
[2026-01-09 23:07:37] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 23:07:37] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:28 queuedata.json
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:07:37] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:15 run_atlas
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:15 job.xml
[2026-01-09 23:07:37] -rw-r--r-- 3 boincer umatlas 222232026 Jan  9 18:15 EVNT.47898824._001420.pool.root.1
[2026-01-09 23:07:37] -rw-r--r-- 3 boincer umatlas 222232026 Jan  9 18:15 ATLAS.root_0
[2026-01-09 23:07:37] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:15 start_atlas.sh
[2026-01-09 23:07:37] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:15 shared
[2026-01-09 23:07:37] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 18:15 input.tar.gz
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:15 boinc_lockfile
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 20:10 pandaJob.out
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas        57 Jan  9 20:10 setup.sh.local
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas    989374 Jan  9 20:11 agis_schedconf.cvmfs.json
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas      5912 Jan  9 23:00 init_data.xml
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas 218047524 Jan  9 23:05 HITS.47898826._037045.pool.root.1
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas       531 Jan  9 23:06 boinc_task_state.xml
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas      1050 Jan  9 23:06 memory_monitor_summary.json
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas   1516240 Jan  9 23:06 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas    421799 Jan  9 23:06 log.47898826._037045.job.log.tgz.1
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas      7851 Jan  9 23:06 heartbeat.json
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas        96 Jan  9 23:07 pilot_heartbeat.json
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 23:07 boinc_mmap_file
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas        29 Jan  9 23:07 wrapper_checkpoint.txt
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas      4746 Jan  9 23:07 pilotlog.txt
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas   1460817 Jan  9 23:07 log.47898826._037045.job.log.1
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas       357 Jan  9 23:07 output.list
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas       620 Jan  9 23:07 runtime_log
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas   1904640 Jan  9 23:07 result.tar.gz
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas       788 Jan  9 23:07 ZrUKDmjEJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmu4gKDmn40hpn.diag
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas      9428 Jan  9 23:07 runtime_log.err
[2026-01-09 23:07:37] -rw-r--r-- 1 boincer umatlas     23255 Jan  9 23:07 stderr.txt
[2026-01-09 23:07:37] HITS file was successfully produced:
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas 218047524 Jan  9 23:05 shared/HITS.pool.root.1
[2026-01-09 23:07:37]  *** Contents of shared directory: ***
[2026-01-09 23:07:37] total 432424
[2026-01-09 23:07:37] -rw-r--r-- 3 boincer umatlas 222232026 Jan  9 18:15 ATLAS.root_0
[2026-01-09 23:07:37] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:15 start_atlas.sh
[2026-01-09 23:07:37] -rw-r--r-- 2 boincer umatlas    592399 Jan  9 18:15 input.tar.gz
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas 218047524 Jan  9 23:05 HITS.pool.root.1
[2026-01-09 23:07:37] -rw------- 1 boincer umatlas   1904640 Jan  9 23:07 result.tar.gz
23:07:38 (18024): run_atlas exited; CPU time 78832.179524
23:07:38 (18024): called boinc_finish(0)

</stderr_txt>
]]>

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